Neomonachus schauinslandi (Hawaiian monk seal): 110588218
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Entry
110588218 CDS
T08474
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsu03009
]
110588218 (DDX55)
Enzymes [BR:
nsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110588218 (DDX55)
Ribosome biogenesis [BR:
nsu03009
]
Eukaryotic type
Pre-60S particles
Helicases
110588218 (DDX55)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
AAA_22
Motif
Other DBs
NCBI-GeneID:
110588218
NCBI-ProteinID:
XP_021554179
EnsemblRapid:
ENSNSCG00000006685
UniProt:
A0A2Y9HW93
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Position
14:86461118..86475126
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AA seq
600 aa
AA seq
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MEHVTEGSWESLPIRLHPLMLGALRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGAIIITPTRELAIQIDEVLAHFTKPFPQFTQILWIGG
RNPGEDVARFKEQGGNIVVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALEALVKRVKIMCIH
GKMKHKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYISFLEINQKCPLQEMKLQKNTGDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRLKDLDFARLARGFALLRMPKMPELRGRQFPDFAPADIN
TDTIPFKDKVREKQRQKLLEQQRKEKRENEGRKKFIKNKAWSKQKAKKEKKKKMNEKRKR
EEGCDIEDEDMEELLSDTRLLKKFKKGKITEEEFEKGLFSSGKRTVPTADLGIPDSEEDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtcgctgccgattcggctgcacccgctgatg
ctgggtgcgctgcgggagctgggcttcccgtacatgacgccggtgcagtctgcaaccatc
cccctgttcatgaaaaacaaagatgtcgctgcagaggcggtcacaggtagtggcaaaacg
ctcgcttttgtcatccccatcctggaaattcttctgagaagggaagagaagttaaaaaag
aatcaggttggggcgatcatcatcacacccacacgggagctggctattcaaatagatgaa
gtcctggcacatttcacgaagcccttcccacagttcacccagattctctggatcggaggc
aggaatcctggagaagatgttgcaaggtttaaggaacaaggtgggaacatcgttgtggcc
actccaggccgcctggaggacatgtttcggaggaaggcggagggcttggatctggccagc
tgtgtgaggtccctcgacgtcctggtgttggacgaagcagacagacttctggacatgggg
tttgaggcaagcataaacaccatcctggagtttttgccaaagcagaggagaacaggcctt
ttctctgccactcagacgcaggaagtggagagcctggtgcgagcggggctccggaaccct
gtacggatttcggtgaaggagaagggcgtagcggccagcagcactcagaaaactccttcc
cgcctggagaactactacatggtatgtaaggcagatgagaaatttaaccagctggtacat
tttcttcgaaatcataagcaggaaaagcacctgatcttcttcagcacctgcgcctgtgtg
gaatactatggaaaggctctggaggccctggtgaagcgtgtgaagatcatgtgcattcac
gggaagatgaaacacaagcgcaataaaatcttcatggagttccgcaaactgcaaagtggg
attttagtgtgcacggatgtcatggcccgaggaatagacattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcagtgcaagtgccttcgtacatcgctgtggtcgtacagcc
cgcatcggccacggcggcagtgcgctcgtcttcctccttcccatggaagagtcctatatc
agtttccttgaaattaaccaaaaatgccccctgcaggagatgaaactccagaaaaacaca
ggagacctccttccaaagctcaagtccatggccttggccgacagagctgtgtttgaaaag
ggcatgaaagcttttgtgtcctacgtccaggcttatgcgaagcacgaatgcaacctcatc
ttcagattaaaggatcttgattttgctcgacttgctcgagggtttgccctgctaaggatg
ccaaagatgccagagctgaggggaaggcagtttccagatttcgcgcctgcggatattaac
acagacaccatcccatttaaagataaagttagagagaagcagaggcagaaactcctggag
caacaaagaaaagagaaaagagaaaatgaagggagaaaaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggagaagaagaaaaagatgaatgaaaaaaggaagagg
gaagagggttgtgatattgaagacgaggacatggaggaacttctcagtgacacgaggctc
ttgaaaaagtttaagaaagggaaaattactgaagaagaatttgagaaggggttgttttcg
agtggcaagagaacagtcccaacagcagatctggggatccctgattcggaagaggactgc
tga
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