Neomonachus schauinslandi (Hawaiian monk seal): 110590127
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Entry
110590127 CDS
T08474
Symbol
TCOF1
Name
(RefSeq) treacle protein
KO
K14562
Treacher Collins syndrome protein
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110590127 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsu03009
]
110590127 (TCOF1)
Ribosome biogenesis [BR:
nsu03009
]
Eukaryotic type
90S particles
Other 90S particles
110590127 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
110590127
NCBI-ProteinID:
XP_044772837
EnsemblRapid:
ENSNSCG00000003310
UniProt:
A0A8M1MG73
LinkDB
All DBs
Position
7:complement(109187348..109224648)
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AA seq
1498 aa
AA seq
DB search
MAEARKRRELLPLIYQHLLKAGYVRAAREVKEQSGQKSFLTQPVTLMDIYTHWQQTSEVG
QKRKAEEDAALQAKKTRVSDPISSSESSEEEEEDEAEAEATKATPRLASTNSSVAGPVLP
SSAKEKAKAKTKKASQMVNSTPHPASGKAVAHLLSGRSPRKSAGPSANTILVSETEEEGS
VPALGTTAKPGMASANQADSSSEETSSSSDETYVEMKPSVKPPQVKASPAPAKDSLGRGA
APASGKAGDVTPQVRGGALTPASKAKEPEEDSESSEEESESEEGAPAEPPHQVKASEKIV
QVRAASGPVKGTPGTGATPAPPGKAGPAAAQAKAGKPEEDSESSSEEESDSEEEAPAAKM
PLQVKPSGKTPQVKAASASAKESPRKGAPPVPPGKAGPAASQVGKGKGEEDPESSTEESD
SEEEAPAAVPPTKSPAQAKPVGQNSQIRAASGPVKGPPQKVGPAATPVGKQEEGSESSSE
EELDNEGEAPAQVRPLPAKSSGKILQVRAASGPAKGPPRKAGPVATQGKAEGSKDDSESS
EEESDSEEEAPAAVAPAQAKLAVRTPLTKASPRKGTPITPAPAKVPPVRVGTPAPWKAGA
ATSPACASSPAMARGAQRPEDSSSSEESESEEDPAPAPAVGQAKPVGKGVTLKAASTPTK
GPSGQGTAPAPPGKAGPAVALVKAEAQEDSSESSEEDSDSEETAEALAQVKASVKIPQSK
ASPAPTRAASTKGAASAPGKVVTAIAPAKQESPAKVKPPARAPQSSAVSVRGRGAVLAVG
KAVTTAAQAQAGPVKSPPEDSESSEEESDSDGEAPTQVRVKPSGKTPQVRTASAPGKGFS
RKGAATAPPEKTEATATRAGKPEEASESSSEEESDSEEEAPAQVKPAVKLPPAKASLMKG
VPGTPVSAEASTARVDTPAPQKARPATPAKKEGNSKAARSKPLTPAPPEKNTEGSSESSD
QELPASQVIKPPLIFVDPNRSPAGPAATATQTPAANTPRKARASASTARSSSSESEDEDV
IPATQGSTPASRTKAAVLTAHSRPAVRASTVGAGSREASGRVSEGKKQEAPVAQVTKRSP
ARLPLTQAALKVLAQKASEAQPPAARTPSSSGVDSALGTLPVQAKGTNKLRKPEVLAVQQ
ATATPAGRAKAKASDTSNDSDDSSGSSSGSEEGAAGPHMAPSAPRLGPAPSTTETLVEET
TAESSEDEVVAPSQSLLSGYVTPGPTLANSQASKATARPDLNPSASSTSATKDAPDGMQE
VEPQHVAGTVSPKTSRREANPTPQKPRKPRKEAESPQASILALQSDLSRRLLSEPWPLNE
AGVQASVVKVLTELLEQERKKAADAAKESSRKGRVGRKRKLSGDQTAARAPKSKKKQQLV
AGGGGEGAGSPEKALRTPKGKAKRDGVSGDIKEKKEKASPGSQGAKEKPEGEPGTLKVEG
GDQGNPKSKKEKKKSDKKKKDKEKKEKKKKVKKASTKDPDSPFQKKKKKKKKTAEQTV
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaggaagcgccgggagttgcttcccctgatctaccagcatctgttaaag
gcgggctatgtgcgcgcggcgcgggaagtgaaggagcagagtggccagaaaagtttcctg
actcagcctgtaacccttatggacatctatactcactggcaacaaacctcagaggttggt
cagaagcggaaggcagaggaggatgcggcactgcaggctaagaagacccgagtgtcagac
cccatcagcagctctgagagctcagaagaggaggaagaggacgaggcagaagctgaagcc
accaaagccaccccaagactagcgtctaccaactcctcagtggcagggccagttttgcca
tcaagcgcaaaagaaaaagccaaggcaaagaccaagaaagccagccagatggtgaactcc
acgccacatccggcctctggaaaggcagtggcccaccttctgtctgggaggtcccccagg
aagtcagcagggccctcagcaaataccatcctggtctcagaaactgaggaggagggcagt
gtcccggccctcggaaccacggccaagcctggaatggcatcagccaaccaggccgacagc
tccagcgaggagacctccagctcgagcgatgagacctacgtggagatgaaaccttcagta
aaaccgccccaggtcaaagcctcaccagcccctgccaaggactctctcgggagaggggca
gccccagcctctgggaaggcaggggatgtgacaccccaagtcagaggcggtgctctgacc
ccagccagcaaggccaaggagccggaagaggactcagagagcagtgaagaggagtctgag
agtgaggagggggcccctgcggagccaccccaccaggtgaaggcctcagagaaaattgtc
caggtcagagctgcctcgggtcctgtcaaggggacccctgggacaggggccaccccagca
cctcctgggaaggcagggcctgcagctgcccaggccaaggcagggaagccagaggaggac
tcagagagcagcagtgaggaggagtccgacagcgaggaggaggcgccggctgccaagatg
ccacttcaggtgaagccttcagggaagaccccccaggtcaaagctgcctcagcttctgcc
aaggagtcccctagaaaaggggctcctccagtgccgcctggcaaggcagggcctgcagcc
tcccaggtggggaaggggaagggggaagaagacccagagagtagcactgaggagtccgac
agcgaggaggaggccccagcagctgtgcccccaaccaagagccctgctcaggcaaagccc
gtggggcaaaactcccagatcagagctgcctcgggtcctgtcaaggggccccctcagaag
gtggggccagcagccaccccagtagggaagcaggaggagggctctgagagcagcagcgag
gaggaattagacaacgagggggaggcgccggcccaggtgaggcccctgcctgcaaagtcc
tccgggaaaatcctccaggtcagagctgcctcaggtcctgctaaggggccccctcggaag
gcagggcctgtggccacccagggcaaggctgaggggtccaaggatgactcagagagcagt
gaggaggagtcagacagtgaagaggaggcacctgcagccgtggctccagcccaggcaaaa
ctggctgtgagaacacccctcaccaaggcctccccaaggaagggcactcccattacccca
gcacctgccaaggtccccccagttcgggtgggcacaccagccccttggaaggcgggagca
gcaacttctccagcctgcgcctcatccccagctatggccaggggcgcccagaggccagag
gactcttcaagcagcgaggaatccgagagtgaggaggaccccgctcctgccccagccgtg
ggacaggcaaagcctgtagggaaaggtgtcaccctgaaagctgcttccacacccaccaag
gggccctcaggccaagggactgccccagcaccccctgggaaggcagggcctgcagtggcc
ctggtcaaagctgaggcgcaggaagactcctccgagagcagtgaggaggactctgacagt
gaggagacggctgaagctctagcccaggtgaaggcctcagtgaaaattcctcagagcaaa
gccagcccagctcccaccagagcagcttcaaccaaaggggcagcatcagctccaggaaaa
gtggtcactgccattgctccagccaagcaggagtccccggccaaggtaaagccgccagcg
agagccccccagagcagtgctgtctcggtgaggggccggggggccgtgctggctgtgggg
aaggccgtgaccactgcagcgcaggcccaggcggggccagtcaagagcccaccggaggac
tcggagagcagcgaggaggagtcggacagtgacggggaggcccccactcaggtgagggtg
aagccctcagggaagaccccccaggtcagaactgcctcagcccctggcaaggggttctcc
aggaaaggggctgcaacagcccctcccgagaagacagaagccacagccacccgggctggg
aagccggaggaggcctcggagagcagcagtgaggaggagtcggacagcgaggaggaggcg
ccggcccaggtgaaacctgctgtaaagctccccccagccaaggcctccctgatgaaaggt
gtcccgggcactcctgtttctgccgaggcctccacagcacgagtggacacaccagcccca
cagaaggctagaccagcaactcctgccaagaaggagggtaactccaaagctgccagaagc
aagcccctgaccccagcacccccagagaagaacacagagggctcctcggagagcagtgac
caggagctgccggccagccaggtgattaaaccccctctgatttttgtcgaccctaatcgt
agtccagctggcccggctgctactgccacacaaaccccggcggcaaacaccccgaggaag
gcccgggcctcggcgagcacagccaggagctcctcctctgagagtgaggatgaggatgtg
atccccgccacgcagggctccactcctgccagtagaaccaaagcagccgtgctcacggcc
cactcaaggccagctgtcagggccagcactgttggggctggcagcagggaggcgtccggt
cgggtgtcagaaggcaagaaacaggaggcgcccgtcgctcaggtgacaaagaggagccct
gctcgcctccctctgacccaggccgccctgaaggtccttgcccagaaagccagtgaggcc
cagcctcctgctgccaggaccccgtcttccagtggggttgacagtgctctgggaacactc
cctgtgcaggccaaggggaccaacaagctcagaaagcctgaggttcttgcggtccagcag
gccacagccactcctgccggacgcgccaaagccaaggcctctgacacctccaatgacagt
gacgacagcagcggcagctcttcagggagcgaggagggtgctgccgggccccacatggct
ccctcagcccccaggctaggtccggccccctccacgacggagaccttggtggaggagacc
acagcggagtccagtgaggatgaggtggtggcaccctctcagtctctcctctcaggttat
gtgacccctgggccgactctggccaattcccaggcttcaaaggccactgctaggccagac
ctcaacccctcggcgtcctctacttctgccaccaaagatgccccagacggcatgcaggaa
gtggagccccaacatgtagcaggcaccgtatcccctaaaacaagcagaagggaggctaat
cccacgcctcagaagccccggaagcccaggaaggaggccgagagtccccaggcctccata
ctggcactgcagagcgacctcagccggcgcctcctgagcgagccctggcccctgaacgag
gccggagtccaggcctcggtggtgaaggtcctgacggagctgctggagcaggagaggaag
aaggccgcggatgctgccaaggagagcagcaggaagggccgggtgggccgcaagcggaag
ctgtcgggggaccagacggccgccagagcccccaagagcaagaagaagcagcagctggtg
gctgggggaggtggggagggtgccggctcgccagaaaaggccctcaggactcccaagggg
aaagccaagagagacggagtgagtggtgacatcaaggagaagaaggagaaagcgtctcct
ggctcccagggggccaaggagaagccagaaggggagccagggacactgaaggttgagggt
ggagaccaaggcaacccaaagagcaagaaggagaagaagaaatctgacaagaaaaaaaaa
gacaaggaaaaaaaggaaaagaagaagaaagtaaaaaaggcctcaaccaaagaccctgat
tcaccattccagaaaaaaaagaagaaaaagaagaagacagcagagcagactgtctga
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