Neomonachus schauinslandi (Hawaiian monk seal): 110594219
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Entry
110594219 CDS
T08474
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110594219 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsu03021
]
110594219 (SF3B3)
03041 Spliceosome [BR:
nsu03041
]
110594219 (SF3B3)
03036 Chromosome and associated proteins [BR:
nsu03036
]
110594219 (SF3B3)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110594219 (SF3B3)
Spliceosome [BR:
nsu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110594219 (SF3B3)
Complex B
110594219 (SF3B3)
Complex C
U2 SnRNP specific factors
110594219 (SF3B3)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110594219 (SF3B3)
TFTC complex
110594219 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
110594219
NCBI-ProteinID:
XP_021561387
EnsemblRapid:
ENSNSCG00000014694
UniProt:
A0A2Y9IBL3
LinkDB
All DBs
Position
16:complement(46496349..46546652)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctatacaacctgacattgcagcgagccacaggcatcagctttgccattcatggc
aacttttctggaactaaacagcaggaaattgttgtttcccgtgggaagatactggagctg
cttcgccctgaccccaacactggcaaagtacacactcttctcactgtggaagtatttggt
gttatccggtcactcatggcctttaggctgacgggtggcaccaaagactacattgtggtt
ggcagtgactcgggtcggattgttatcttggaataccagccatctaaaaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgccgccgcattgttccaggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgaaaaacagaagttg
gtatatatcttgaacagagatgctgcagcccggcttaccatttcatctcccctagaggcc
cacaaagcgaacactttagtatatcatgtggtcggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcagctaatacccagcagactcttaccttctatgagttagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggcaactttcttattacagttcccgga
gggtcagatggtccaagtggagtattaatctgctctgaaaactatatcacctacaagaac
tttggtgaccaaccggatatccgctgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtttgctctgccacccataagaccaaatcgatgttcttc
tttttggcccaaactgagcagggcgatatcttcaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagacacgttcttcttccaaccaagaccactcaaaaaccttgtgctggttgatgaa
ttggacagtctgtctcccattttgttttgccagatagctgatctggccaatgaagacaca
ccacagctctatgtggcctgtggtaggggaccccgatcatctctgagagtcctaaggcat
ggacttgaggtatcagaaatggctgtctctgagttacccggtaaccctaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacacttgtgttgtccatcggagagactgtggaagaagtgactgactctgggttcctg
ggcaccaccccaaccttgtcctgctcgttgttaggagatgatgccttggtgcaggtgtat
cctgatggcattcgacacatacgagcagacaagagagtcaatgagtggaagacccctgga
aagaaaacgattgtgaaatgtgcagtgaaccagcgacaggtggtgatcgccctgacagga
ggagagctggtctattttgagatggatccttcaggacagctgaatgaatacacagagcgg
aaggagatgtcggcagatgtagtatgcatgagtctggccaacgtgcctcctggagagcag
cggtctcgcttcctggctgtggggctggtggacaatactgtcagaatcatctctctggat
ccctcagactgtttgcagcctctgagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggtgggactgagaagcaagatgagttgggtgagaggggctctatt
ggcttcttgtacctgaatattgggttacagaatggtgtgctgctaagaactgtcctggac
cctgtcactggggatctgtctgacacccgcactaggtacctggggtcccgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaggaggcagtgttggccatgtcaagccgatcgtgg
ttgagctattcctaccagtctcgtttccatctcactcccttgtcttatgagaccctggag
ttcgcatctggcttcgcctctgaacagtgtcctgagggcattgtggccatctccaccaat
accctgaggattttagcgttggagaagctaggtgctgtcttcaatcaagtagcatttcca
ctgcagtacacacccaggaaatttgtcattcaccctgagagtaacaaccttatcatcatt
gagactgaccacaatgcctacactgaggcaacaaaagctcagaggaagcagcaaatggca
gaggaaatggtagaagcagcaggggaggatgagcgggagctcgctgcagagatggcagca
gcattcctcaatgaaaacctccctgagtccattttcggagctcctaaggctggcaacggg
caatgggcctctgtgatccgcgtgatgaatcctattcaagggaacacgctggatcttgtc
cagctagaacagaatgaggccgcatttagtgtggccgtgtgcaggttctccaacactggt
gatgattggtatgtgttggtgggcgtggccaaagacctgatcctcaaccccaggtctgta
gcagggggctttgtctatacctacaagctcgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagggtgttg
attggtgtggggaagcttctgcgagtttatgatctggggaagaagaagttactccgaaag
tgtgagaacaagcatattgccaattacatctctgggatccagactattggacacagggta
attgtgtctgatgtccaagaaagtttcatctgggttcgatacaagcgtaatgagaaccag
cttatcattttcgccgatgatacttacccacgatgggtcactacagctagcctcctggac
tatgatactgtggctggggcagacaagtttggcaacatttgtgtggtgaggctcccacct
aataccaatgacgaagtggatgaggatcccacaggaaacaaagccctgtgggaccggggc
ttgcttaacggggcctctcagaaggcagaggtgatcatgaactaccatgtgggcgagaca
gtgctgtcattacagaagaccacactgatccctggaggctcagaatcacttgtctatacc
accttgtcaggaggaattggaatccttgtcccattcacatcccatgaggaccatgacttc
ttccaacatgtagaaatgcacctacggtctgagcatccccctctctgtgggcgagaccac
ctcagctttcgttcctattacttccctgttaagaatgtgatagatggagatctctgtgag
cagttcaactccatggagcccaacaaacagaagaacgtctctgaagaactggaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggacccgctatgccttctga
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