Nicotiana sylvestris (wood tobacco): 104212913
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Entry
104212913 CDS
T05026
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104212913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104212913
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104212913
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104212913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
104212913
NCBI-ProteinID:
XP_009760590
UniProt:
A0A1U7VFG5
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MSLLPKSDSIHIREVWSDNLEQEFDLIREIVDEYPYIAMDTEFPGVVLRPVGNFKNSNDY
HYQTLKDNVDLLKLIQLGLTFSDENGNLPKCGTDKYCIWQFNFCDFNPNEDVYANDSIEL
LRQSGIDFKKNIEKGIDATRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKILTCQDLP
DTQTGFFNLINMYFPVVFDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA
CTFRKLKENFFSGSMEKYAGVLYGLGVVENGQNVH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttacccaaaagcgattcgattcacattcgagaagtatggagtgacaatctg
gaacaagagttcgatttgatccgagaaatcgtcgatgagtatccgtacattgcaatggat
acggaatttccaggtgttgttcttcgacctgtcggaaatttcaagaacagtaacgattat
cattaccaaaccctaaaggataatgtggatttgttgaagttaattcagttggggttaaca
ttctctgatgaaaatgggaatttaccaaagtgtggtactgataaatactgcatttggcag
tttaatttctgtgattttaatccaaatgaggatgtttatgctaatgactcaattgagttg
ttgaggcagagtggcattgatttcaagaagaatattgaaaagggtattgatgctacgaga
tttggtgagcttttaatgtcttcaggaattgtgctaaatgataatgtgtattgggttaca
tttcatagtggttatgattttggttacttattgaaaatcttgacttgtcaggatttgcct
gatactcaaacaggtttctttaacttaatcaacatgtattttcctgtggttttcgatatt
aagcatttgatgaagttctgtaatagtcttcatggtggattgaacaagcttgctgagttg
ttggaggttgagagagttggagtttgccatcaggccggttcggatagcttgcttacagct
tgtacttttaggaagttgaaagagaacttctttagtggatcaatggaaaagtatgccggt
gtcttgtatggtctaggtgttgttgagaatggacagaatgtccattga
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