Nicotiana sylvestris (wood tobacco): 104236554
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Entry
104236554 CDS
T05026
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03082
ATP-dependent chromatin remodeling
nsy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104236554
03083 Polycomb repressive complex
104236554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsy03036
]
104236554
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104236554
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
104236554
HDAC complexes
Sin3A-HDAC complex
104236554
BRAF-HDAC complex
104236554
REST complex
104236554
SHIP complex
104236554
MiDAC complex
104236554
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
104236554
Heterochromatin formation proteins
Other heterochromatin formation proteins
104236554
Chromatin remodeling factors
NuRD complex
104236554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
104236554
NCBI-ProteinID:
XP_009788798
UniProt:
A0A1U7XD47
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYGLHNKMEVYRPHKAYPVEL
AQFHSADYVEFLNRITPDTQHLFPSEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDMKDTGERDGRFYSINVPLKDGIDDGIFTRLFKT
IIAKVVETYSPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWALETGVLLDTELPNEIPDNDYIKYFGPDYSLKLPGGHIENLNSKSYIGTIK
MQVMENLRCIQHAPGVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKHIQRDDEYYEGD
HDNDNHMDDA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccaaggacaaaatctcctacttctacgacggcgatgtcggaagcgtgtacttc
ggtccgaatcatccaatgaagccgcacagattgtgtatgactcatcatctggttctagct
tatggtcttcacaacaagatggaagtttataggcctcataaagcatatccagtggagcta
gcgcagtttcattcagctgattatgttgagttcttgaaccgaattacccctgatacccag
cacttgttccctagtgaaatggctagatataatcttggagaagattgccctgtatttgac
aacttattcgagttttgccaaatttatgctggtggaacaatagatgctgcacgcaggttg
aataatcagctttgtgacattgctataaattgggctggtggattgcatcatgctaagaaa
tgtgctgcttcaggattttgctatataaatgacctagttctgggaatattggagctactg
aagtatcatgcgagggtgctatatattgatattgatgtgcatcacggtgatggtgtagaa
gaggccttttatttcactgacagggttatgacagttagtttccacaagtatggagataag
ttctttcctggaactggtgatatgaaggatacaggggaaagagatggaagattctattcc
ataaatgtgcctctcaaggatggaatagatgatggcatcttcactcgactcttcaaaaca
attattgcaaaggttgtggaaacatattcacctggtgcgatagttctgcaatgtggggca
gattcactagctggtgaccgtctgggctgcttcaacctctccattgatgggcatgctgaa
tgcgtaaggtttgtgaagaaatttaatttgccattgctggtaactggaggtgggggatac
acaaaagagaatgttgcccgatgttgggcactggaaactggagttcttttagacacagaa
cttcctaatgaaattccagataatgattacatcaaatattttggccctgattattcattg
aagcttcctggcgggcacatagagaacttgaatagcaaatcatacattggcaccataaag
atgcaagttatggaaaatcttcgttgcatccagcatgctcctggtgtacaaatgcaagaa
gtaccacccgacttctatattcctgattttgatgaagatgagcaaaatccagacgagcgt
gtggatcagcacacccaagataagcatattcagcgtgacgatgaatattatgagggcgac
catgacaatgataaccacatggatgatgcttaa
DBGET
integrated database retrieval system