Nicotiana sylvestris (wood tobacco): 104248447
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Entry
104248447 CDS
T05026
Name
(RefSeq) dnaJ homolog subfamily C GRV2 isoform X1
KO
K09533
DnaJ homolog subfamily C member 13
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104248447
03110 Chaperones and folding catalysts [BR:
nsy03110
]
104248447
Spliceosome [BR:
nsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104248447
Chaperones and folding catalysts [BR:
nsy03110
]
Heat shock proteins
HSP40 / DNAJ
104248447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RME-8_N
GYF_2
DnaJ
Motif
Other DBs
NCBI-GeneID:
104248447
NCBI-ProteinID:
XP_009802998
UniProt:
A0A1U7YIP9
LinkDB
All DBs
Position
Unknown
AA seq
2593 aa
AA seq
DB search
MDFVSRHATDHHQPPTSESTTSSSSAPPSSSHAHGSEEPEYLARYMVVKHSWRGRYKRIL
CISNFTLITLDPGTLSVTNSYDVGSDYDGAAPIIGRDDNSNEFTISVRTDGRGKFKAMKF
SSKYRASILTELHRIRWNKLGVVAEFPVLHLRRRTSEWVPFKLKITYIGVELIESKSGEL
RWCLDFRDMASPSIILLSDPYGKKNTDSGGFVLCPLYGRKSKAFQAASGTTNSAIISNLT
KTATCMVGVGLTVDNSQAVTLSEYINRRAKEAVGADETPCGAWLVTRLRSAARGTLNTPG
VSMSIGPKGGLGEHGDAVSRQLILTKASLVERRPENYEAVIVRPLSAVGALVRFAEEPQM
FAIEFYDGCPIHVYASTSRDNLLAAVRDVLQTECQCSIPVLPRLTMPGHRIDPPCGRFHL
KFPASQQPVADLETATLHLKHLAVAAKDAVAEGGSIPGSRAKLWRRIREFNACIPYGGVP
SGIEVPEVTLMALITMLPAAPNLPPESPPLPPPSPKAAATVMGFIACLRRLLSSRSAASH
VMSFPAAVGRIMGLFRNGSEGVAGETAGLVAVLIGGGPGETNMQTDTKGEWHATIMHTKS
VLFGQQSNLVVLVNRLRPVSVSPFLSMSIVEVLEAMVCEPHGETTQYTVFVELLRLVAGL
RRRLFALFGHPAESVRETVAVIMRTIAEEDAVAAESMRDAALRDGALLRHLLHALYLLAG
ERREVSRQLVALWADSYQPALVLLSRVLPPGLVAYLHTRSNVVPVEGVTDQENSLLSRRR
RRLLHQRRIHPGKGITPQGHSLPSPTNYEVSEQAPGSAVPFRTSDGYQRAAVDSVPGQVP
TMQSSAVNAGEYFQGELSAAAVPQTDQSSTIPALDSPSTNIPDLAESNVANAVDSDVSAI
SQDTGLPAPAQVVVEDAPVGCGRLLLNWPEFWRAFSLDHNRADLIWNERTRQELRESLQA
EVHNLDVEKERTEDIVPGGANRDSITDKESAPQISWNYSEFSVRYPSLSKEVCVGQYYLR
LLLESGTSGRAQDFPLRDPVAFFRALYHRFLCDADTGLTVDGAIPDELGASDNWCDIGRL
DGFGGGGGSSVRELCARAMAIVYEQHYNTVGSFEGTSHITVLLDRTDDRALRHRLLLLLK
VLMKVLANVESCVLVGGCVLAVDLLTVVHEASERTTIPLQSNLIAASAFTEPLKEWMFLD
KDGAQAGPMEKDAIRRLWSKKEIDWTTRCWASGMPDWKKLRDIRELRWALAVRVPVLTPT
QVGEVALSILHSMVAAHSDIDDAGEIVTPTPRVKRILSSPRCIPHIAQAMLSGEPSVVES
AAALLKAIVTRNPKAMIKLYSTGAFYFALAYPGSNLLSIAQLFSVTHVHQTFHGGEEAAV
SSSLPLAKRSVLGGLLPESLLYVLERSGPAAFAAAMVSDSDTPEIIWTHKMRVENLIRQV
LQHLGDFTQKLSQHCHSLYEYAPMPPVTYPELRDEMWCHRYYLRNLCDEIRFPNWPIVEH
IEFLQSLLVMWREELTRRPMDLSEEEACKILEISLDEVSRDDAPKRQSQETVNISKQIEN
IDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQATMQGLQGPQLWRLLLLLKG
QCILYRRYGDVLEPFKYAGYPMLLNAITLDKDDNNFLSSDRASLLVAASELIWLTCASSS
LNGEELVRDAGIQLLANLLSRCMCVVQPTTPSSELSTVIVTNVMRTFSVLSQFESARADM
LEFSGLVDDIVHCTKLELVPAAVDAALQTIAHVSVSSEFQDALLKAGVLWYLFPLLFQYD
STAEETDKSEAHGVGVSVQVAKNMHAVRTALALARLSGLGADENQTPYNMVAADALRALL
TPKLASMLKDQSPKDLLFKLNSNLETPEIIWNTSTRAELLKFVDEQRASQDPNGSYDLND
SHSFAYEALSKELFVGNVYLRVYNDQPDYETSEPEVFCVSLVDFISCLVRSDVAAGSDIP
STTGTSDFQNDTTNGPYNEEQLSNDPSTPSDVKQMKKEENELVKKLQFALIALQNLLTST
PDLASVFSAKEKLLPIFECFSVPVASTTIVPQLCLSVLSRLTTYAPCLEAIVSDGSSLLL
LLQMLHSSPSCREGALHVLYALASTPELAWAAAKHGGVVYILELLLPLQEVPLQQRAAAA
SLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSIVEQTTETPELVWTPAMA
ASLSAQIATMASELYREQMKGSVVDWDVPEQATGQQEMRDEPQVGGIYVRLFLKDPKFPL
RNPKRFLEGLLDQYLSSIAVTHYDVQSVDPELPLLLSAALVSLLRVHPALADHVGFLGYV
PKLVSAVAYEGRRETMAIGEVKNFDHSKEAYEADDSSMQPPSPTLQERVRLSCLRVLHQL
AASTTCAEAMAATSVGTPQVVPLLMKAIGWQGGSILALETLKRVVVAGNRARDALVAQGL
KVGLVEVLLGLLDWRAGGRNGLRSQMKWNESEASIGRVLAVEVLHAFAAEGAHCTKVREI
LNASDVWSAYKDQRHDLFLPSNAQSAAAGVAGLIENSSSRLTYVLTAPPMQTGQAKPPVS
TTSDSNGKQDQGP
NT seq
7782 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtcagccgtcacgccactgaccaccaccaacctccaacttctgaatccacc
acatcctcctcttctgctccaccctcctcctctcatgcccatggctccgaagagcccgag
tacttggcccgttacatggttgtcaaacactcctggcgaggtcgatacaaaaggattctt
tgcatttcaaatttcactttgattacactggatcccggtacattatcagtcactaactca
tacgatgttgggagtgattatgatggtgcggcccctattattgggagagacgacaattca
aatgagtttaccataagtgtgaggactgatggccgcgggaagttcaaggctatgaagttc
tcttccaagtatagagcaagcattttgactgagttgcatagaattaggtggaataagctt
ggagtggttgcagagttccctgttttgcatctaaggaggaggacttctgagtgggttcct
tttaagttgaaaattacttatataggagttgagcttattgaatcaaaatctggagaactt
cgttggtgcttggactttagagatatggcctctccttccattatccttctatctgaccct
tatgggaagaaaaatacagattccggaggttttgttctttgcccgctttatggaagaaaa
tctaaagctttccaagctgcttcgggaactacaaactctgccatcatatcaaatctgact
aaaactgcgacatgcatggtgggtgtgggattaactgtcgacaattctcaagcagtgacc
ttatctgagtacataaataggagagcaaaagaggctgtcggggcagatgaaactccttgt
ggtgcttggttagtaacaagattgcgctcagctgctcgggggactctgaatactccagga
gtaagtatgtctattggcccaaaagggggccttggagaacatggcgatgcggtatctcgt
caactcattctcactaaggcctcacttgtggaaagacgacctgagaactatgaagctgtt
atcgtgcgtcctctatctgccgttggtgctcttgttcgatttgctgaggagccccaaatg
tttgctatcgagttttatgatggatgcccaattcatgtctatgctagcacttctcgtgat
aacttacttgcagcagttcgtgatgtcttgcaaacagaatgccagtgttccatcccggtg
ctaccaaggctaacaatgcctggtcatcgaattgatccgccatgtggcagatttcactta
aaatttcctgcttcacaacaacctgttgctgatttggaaactgcgactctgcatttaaaa
cacttggcagtagccgctaaagatgctgtggccgagggaggatccattcctggatcaaga
gcaaaattatggcggcggatacgggaatttaatgcatgtattccatatggtggagtacct
tctggtattgaagtacctgaggtgacactgatggctttgattacaatgcttccagctgct
cccaatctcccaccagagtcaccaccacttcccccgccgtctcctaaagctgctgctaca
gtgatgggtttcattgcttgtttgcgtaggttgctttcatcaagaagtgctgcttctcat
gtgatgtcttttcctgctgctgttggccgtataatgggtctatttagaaatgggtctgaa
ggagtagctggtgaaactgcaggccttgtggcggtacttattggtggtggtccaggggaa
actaatatgcaaacagatacaaagggggaatggcatgcaacaataatgcataccaagtct
gtgctgtttggtcaacaaagtaatcttgtagttctggtaaatcggctaaggcctgtatca
gtatcgccatttttgtcaatgtctattgttgaagttcttgaggcaatggtctgtgaacca
catggagaaacaacccagtatacagtgtttgtggagttattacgtctagtagctggcttg
cgccgccggttgtttgcattgtttggacatcctgctgaaagtgtgcgagaaacagtagct
gtcattatgcgaacaattgctgaagaagatgcagttgcagcagaatcaatgcgtgacgct
gctttacgagatggtgcactactgcggcatttgttgcatgcactttaccttctagctggt
gagcgacgtgaagttagcaggcaacttgtggctctttgggctgactcttatcaacctgct
cttgttctgttatctagagttttgcctccaggacttgttgcttatctgcacaccagatcc
aatgtggttccagttgaaggtgtgactgaccaggaaaattcattgctgagtaggagacgt
agacgcttgcttcaccaaaggaggattcatcctgggaaagggatcacacctcaagggcat
tctttgccttctcctactaactatgaagttagtgagcaagctcctggaagtgctgtccct
ttcagaacttctgatggttatcagagagctgctgttgattcagttcctggacaggtgcca
acaatgcaatcttcagctgtgaatgcaggtgaatacttccaaggtgagctgtctgctgct
gctgttcctcaaactgatcagtcgtcaaccattcctgctcttgacagtccttcgacaaat
atacctgacttggctgaatcaaatgttgcaaatgctgtggattccgatgttagtgcaatt
tcccaggatacaggtcttccagctcctgcacaggtagtggtcgaagatgcacctgttgga
tgtggaaggttgttattgaattggccagaattttggcgagctttcagtcttgaccataac
cgtgctgacttgatttggaatgagcggaccaggcaggaattaagagagtcgttgcaggct
gaggttcataatctagatgttgaaaaagaacgcactgaggatattgttcctggcggtgca
aacagagactcaataactgacaaagagagtgcgcctcaaatatcgtggaactacagcgag
ttttctgttagatatcctagcttatcaaaagaagtttgcgtaggccaatactatttgcgt
ttacttcttgagagtggaaccagtgggagggcacaagattttccactacgtgaccctgtt
gcttttttcagagccctctatcaccggtttctatgtgatgctgacactgggcttactgtc
gatggtgctattcctgatgaattaggtgcttctgataattggtgtgatataggaagatta
gatggttttggaggagggggaggctcctcagttagggagctctgtgcccgggccatggca
attgtttatgaacaacactacaacacagttggctcatttgaaggcacatcacatattaca
gttctcttggacaggactgatgatagagctttacgacaccgtcttcttcttcttctaaag
gtcttgatgaaggttttggcaaatgtagagtcatgtgtcttggttggtggctgtgtactg
gctgttgatctactaacagtagttcatgaagcttcagaaagaacaactatacctctgcag
tcgaacttgattgctgcttctgcttttacggaaccattaaaggagtggatgtttcttgac
aaggatggtgcacaagctggaccaatggagaaggacgctattaggagactctggtcaaaa
aaggaaatagattggaccacaagatgttgggcttctgggatgccagactggaagaagttg
cgagatattcgtgagcttaggtgggctttggctgtccgagttcctgttctcactccaacc
caggtaggagaagtagcattgagcatattacatagcatggttgcagcacattcggatata
gatgatgctggtgagatagttacgccaacacctagggtcaagcggatcttatcaagtcca
cgttgcattccgcatattgctcaggctatgctctctggagaaccgagtgttgtagaaagt
gctgctgctttgttgaaggccattgttactaggaacccaaaggcaatgataaaactatat
agcactggagccttttactttgctctagcttatcctggttccaatctcctctcaattgct
cagctgttctctgtgactcatgttcatcaaacatttcatggaggggaagaagccgctgtc
tcctcttctttgcctttggcaaaacgcagtgttttgggtgggcttttacctgagtcattg
ctatatgttctggaacgtagcggtcctgctgcatttgcagcagcaatggtttctgattct
gacactcctgagattatttggacgcacaagatgcgagttgaaaatcttattcgtcaggtc
cttcagcatctaggtgattttacacagaagttgtcacaacactgtcattctttgtatgaa
tatgctccaatgccacctgtgacatacccagagctaagggatgagatgtggtgccaccgt
tattaccttcgtaatttatgtgatgaaatccgctttcctaattggccaatagttgaacac
attgaattcctgcaatcactgctggttatgtggcgagaagagttaactcggagacccatg
gatctttctgaagaagaggcttgcaaaatactggagatttccttggatgaggtatcaaga
gatgatgctcccaaaagacaatcacaggagacagttaatatttctaagcagattgagaac
attgatgaagaaaagctcaagcgacaatatcgaaaacttgcaatgaagtatcatccagac
aaaaatcctgaggggagggagaagtttctggcagtgcagaaagcttatgaacggctgcag
gctacaatgcaaggactgcaaggtccacaactttggagactattgcttttattgaaagga
caatgcattttgtatagacgatatggagatgtactggagccgtttaaatatgctggttac
ccaatgttgttaaatgcaatcaccctggacaaagatgacaacaacttcctttcctctgat
cgagcatctcttcttgttgccgcatctgaattgatatggctaacgtgtgcatcttcttca
ctgaatggtgaagaacttgtaagggatgccggaatacaacttcttgcaaatcttctgtcc
cgttgcatgtgtgtagtacaaccaactactccttccagtgaactatcgactgtcattgtc
acaaatgtgatgagaaccttttcagttttgagtcagtttgagagtgccagagctgacatg
cttgaattttctggcctagttgatgatattgtacattgtactaaacttgagcttgtacca
gctgctgttgacgctgcccttcagacaattgctcatgtttctgtgtcatctgaatttcaa
gatgcgttacttaaggctggtgttttgtggtacctgtttccactgttgtttcagtatgat
tctactgcagaagagacggataagtcagaagctcatggtgttggtgttagtgttcaagtt
gcaaagaatatgcatgctgtacggacagcgctggctttggcaagacttagtgggttgggt
gctgatgagaatcagacaccatataatatggttgctgctgatgcgcttagagctttgctg
acaccaaagcttgccagtatgctgaaagatcaatctccgaaagatctattgttcaaacta
aattcgaacttggagaccccagagataatttggaatacgtcaacccgagcagaactctta
aagtttgttgacgaacagcgtgctagccaggatcccaatggttcatatgacctgaatgat
tctcattccttcgcatatgaagcattatctaaggaactttttgttggaaatgtatatttg
agagtatacaatgaccagccggactatgaaactagtgaacccgaggttttctgtgtttcc
cttgttgattttatatcatgtctagtacggagtgatgttgcagcgggatcagatattccg
tcaaccaccgggacatcagatttccaaaatgatacgactaatggaccatataatgaagag
cagctgtctaatgatccttcaactccttcagatgtgaaacagatgaagaaagaggaaaat
gaattggttaagaaactccagtttgctctaattgcgctccagaacctcctgacgagcacc
ccagatttggcatcagttttttctgcaaaagaaaaattattaccaatttttgaatgcttc
tctgttcctgttgcttcaacaaccattgttccccaactgtgtctgagtgtcctgtcacgc
ttgacaacatatgctccgtgcttggaggcaattgtttctgatggatccagtctgctactt
ctattgcaaatgcttcactcctctcctagctgtcgtgaaggagctcttcatgttctatat
gctttagctagcacaccagagcttgcatgggcagctgcgaagcatggtggagtagtttac
attcttgaacttctcctgcctttgcaagaagtccctctgcagcaaagagcagcagctgcc
tcgttgttgggaaagcttgttggacagccgatgcatggacctagagttgctataactctg
gctaggtttcttcctgatggcttggtatcggtcatcagggatggtcctggtgaagctgtt
gtgagcattgttgaacaaacgacagagactccagaactcgtgtggactccagcaatggct
gcttctttgtctgctcaaattgcaaccatggcatcagaactatatcgagaacagatgaaa
ggcagtgttgtcgattgggatgtacctgagcaggcaactggccaacaggaaatgagggat
gagccgcaggttggaggaatctatgttagactttttttaaaagatccaaaatttcctctt
agaaatccgaagcgatttttggaaggactactggatcaatatctttcatcaattgctgtg
acacattatgatgtccaatctgttgaccccgaacttcctctgcttctatctgctgctctg
gtgtccttattaagggtgcaccctgctcttgcagatcatgttggatttttaggatatgtg
ccaaaacttgtgtctgcagtggcatatgaagggagaagagaaacaatggccattggggaa
gtgaaaaattttgaccactccaaggaagcctatgaggctgatgatagctcaatgcagccc
ccttcaccaacactacaagagcgtgtgcgtcttagttgtttgcgtgttctgcatcaactt
gcagcaagtacgacgtgcgccgaagctatggcagctactagtgttgggacaccccaggtt
gttccccttttgatgaaagctatcggatggcaaggtggaagtattctcgctcttgaaaca
ttaaaacgtgtagtcgttgctggaaaccgagctagggatgcgttggttgctcagggactt
aaggttggtcttgttgaagtactcctaggccttcttgattggagagctggaggaagaaat
ggacttcgctctcagatgaagtggaatgagtctgaagcatccattggcagggtgcttgca
gttgaggttttgcatgcttttgcggcagaaggggcccattgtactaaagttcgcgagata
ctaaatgcttccgatgtttggagtgcttataaggatcagagacatgatctgttcctccct
tcaaacgcccaatctgcagctgctggagttgctggattaattgagaattcctcctccagg
ctgacttatgttctgacagctcctcccatgcaaactggtcaagcaaaacctccagtctcg
accacatctgattcaaatggcaagcaggatcaaggtccataa
DBGET
integrated database retrieval system
