Nicotiana tabacum (common tobacco): 107760230 Help Entry 107760230         CDS       T04643                                  Name (RefSeq) DNA ligase 4-like   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     107760230  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nta03400]     107760230 Enzymes [BR:nta01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      107760230 DNA repair and recombination proteins [BR:nta03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      107760230 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C BRCT PTCB-BRCT RNA_ligase DNA_ligase_IV Motif Other DBs NCBI-GeneID:  107760230 NCBI-ProteinID:  XP_016433737 UniProt:  A0A1S3X1E4 LinkDB All DBs Position Un AA seq 1151 aa AA seqDB search MATSAVDGGGSSIGGEDIKFSVMVSLFQWIQKSKSSAQKRSKFRKFLDAFCRKPQDNFAA MRLILPGLDRERGSYGLKEHVLATCLIDALAMSRDSDDARRLLNWRKGGPKTGSNAGNFS LVAAEVLQRRQGMASAGLTIKELNEFLDHLASSENRAEKTSILSDLIRKTNAQEMKWIIM IILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKHQDIEVGKAVRP QLALRVSNASAAWKKLHGKEVVVECKFDGDRIQIHKNNSDLNFFSRNFFDHQEYAHGMSD VITQNILVNKCILDGEMLVWDASMNRFAEFGSNQEIAKAAREGLDSDRQLCYIAFDILYV GDTSVIHRSLKERQEILQKVVKPIKGRLEILVPNGGLNAHRPSGKDALRFNRDEGIVLKD LTSKWEPSDRSGKWLKLKPEYVRAGSDLDVLIIGGYYGSGRHGGEVAQFLVGLAERPAPN TYPRRFISFCRVGTGVSDEERNTIVTRLKPYFRKYEYPKQAPPTFYQVTNNAKERPDVWV ESPEKSIIVSITSDIRTIRTEVFAAPYSLRFPRIDRVRYEKPWHECLDVQSFVDLVHSSN GTTQREADYGVGQDHEPKAIRSSRKRGKKNVSAVPSHFVQTDVSHIKGETSVFSNMVFYF ANVPSSHTLDSMHKMVVEHGGSFSMNLNNSVTHCIAAENRGIKFQAAKLHGDVIHCSWLF DCCLQKRLLPLQPKYFLFLSDSTKRKLEAEVDEYCDSFYSDLSVKDIRKLLSDIERSEDS KTVEYYKKKYCPKDKWARFHGCCIYFFIPEQCLKYSDCKALVELATRRMKVEISVGGGKV GDNLCHVTHVVVMSLPDFDVNFSEVLNSFSEAEKHVLYNTKLHVVRASWLEDFFKEDRKL HEDSYSLKPSNFQMSISEKRHDKVRGKAVKCKRASSPDNHGVQIKAEGISEQCQAITLPK GDRKRNRLRPTGTATAKAKPAINMPWRVRRKATNRRAKIHENESDESATSGEHLHNDESE GAAGTRGSPENVGEHGSGIQNKDVADDLELSPHGETFPQGTSECSRSRERLDEAHETSYE SANIASGKLEDPVDPVQAMLLHMIPQLDGKPSHSVDSLVKDDKPEADANPSPKKKKKVSY KDVAGELLKDW NT seq 3456 nt NT seq  +upstreamnt  +downstreamnt atggcgacttccgccgtagatggtggtggtagtagtattggcggagaagacataaagttc agcgtaatggttagcctattccagtggatacagaagagcaaatcatcagcgcagaagcgg tccaagttccggaagtttctagacgccttctgcaggaagcctcaggacaatttcgctgct atgcggctcattcttcctggtctcgaccgagagcgtggctcttatggactcaaagagcac gtgcttgccacgtgccttattgatgcccttgccatgtcccgtgactccgatgatgcccga cggctcctcaactggcgtaaaggcggccccaaaactggctccaatgccggaaacttctct cttgtcgctgccgaggtcctccaacgtagacagggaatggcctctgctgggctaacaatt aaggaactaaatgaattccttgatcacttggcgtccagtgaaaacagagcagagaagact tcaattctgtctgatctcatcagaaaaacaaatgcccaagaaatgaaatggattataatg ataattctgaaagatcttaagttgggaattagtgaaaagagcatcttccatgaattccat cctgatgcagaggacttattcaatgtcacatgcgatttaaaactagtttgtgaaaagttg agggacagaagtcaacggcataaacaccaggacattgaagttggaaaagcggtccgccct cagctggctcttagggtcagtaatgcatctgctgcgtggaaaaagcttcatgggaaggaa gtagttgttgagtgcaaatttgacggggatcgtatccagattcataaaaataattctgac ctaaacttcttctcaagaaacttttttgatcatcaagagtatgctcatggaatgtcagat gttattacacagaatattcttgttaacaagtgcatacttgatggtgaaatgctggtttgg gatgcatcaatgaaccgctttgcagagtttggttccaatcaagaaatagcaaaggctgca agagagggtcttgatagtgataggcagttgtgctacattgcattcgatattctttatgtt ggggataccagtgttattcaccgaagcttgaaggaacgtcaagagattctccagaaagtc gtgaagcccataaaaggccgtttagaaattttagtccctaatggcggtcttaatgctcat cgtccttctggtaaggatgctcttcgattcaatagagatgaaggaattgttttgaaagac ctaacttcaaaatgggaacccagtgatcggagtggaaaatggctaaagttgaagcctgaa tatgttcgagctggctctgatttggatgttcttattattggaggctactatggttctggg cgccatggaggagaggtagctcaatttctggttggtcttgcagagcgtccagctccaaat acatatccccgaaggttcatttctttttgcagagtgggcactggagtttctgatgaggaa cgtaataccatagtaactcgattaaagccctatttccggaagtatgagtacccgaagcag gcaccaccaacgttttatcaagtaacaaataatgcaaaagagcgaccagacgtgtgggtt gaaagtccagagaaatccatcattgtttcgattacaagtgacattagaacaataagaact gaggtatttgctgctccatacagcttgagatttccacgtattgatcgagtgagatatgaa aagccttggcatgagtgtcttgatgtgcaatcatttgttgacctggtacattcgagcaat ggtaccacgcagagggaggcagattatggagttgggcaggatcatgaaccaaaggccatt aggtcgtcaagaaaacgagggaaaaagaatgtttctgcagttccttctcattttgtacag actgacgtgtctcacatcaagggtgaaacgtcagtgttctctaacatggtgttctatttt gctaatgtgccttcatcacatacacttgattccatgcacaaaatggtggtcgagcatggg ggttctttctccatgaatttgaataactcagttactcactgtatagcagctgaaaataga ggtatcaagtttcaagctgcaaaacttcatggagatgttattcactgctcttggctcttt gattgctgtctgcaaaagaggctccttcctttacagccaaagtattttcttttcctttct gattcaacaaagagaaagttggaagcagaagtggatgaatattgtgattctttctactct gacctcagcgtcaaagacattagaaagcttttgagcgacatagaacgctccgaagactcc aaaactgttgagtactacaagaaaaagtactgtcccaaggataaatgggctcgatttcat ggttgctgcatttactttttcattccagagcagtgtttgaaatattcagattgcaaggct ttagtggaactcgctacgagaaggatgaaagttgaaatttctgtgggtggtgggaaagtt ggtgacaatctttgtcatgttacccatgtggtggtcatgtctctaccagactttgatgta aatttcagtgaagttttaaatagtttctcagaggcagagaagcatgttttgtacaacaca aaactgcacgttgtcagggcaagttggttggaggatttctttaaagaggaccggaagtta cacgaggatagttacagcctaaagcctagcaattttcaaatgtcaatctctgagaagaga catgataaggtaagaggaaaagccgtaaagtgcaaaagagcatcttcccctgataatcac ggagtacaaatcaaagcagaaggaatttcagaacagtgccaagccatcacgctacctaag ggggatagaaagagaaatagattaagacctactggtactgctacagcaaaagcaaaacca gcaatcaacatgccatggagagttaggcgcaaggccacaaatagacgtgctaagattcat gaaaatgaatctgatgaaagtgccacttcaggtgagcaccttcataatgatgagagtgaa ggggctgctgggactcgtggaagtcctgaaaatgttggagagcatggctcaggaattcag aacaaggatgttgcagatgatttggaattgtcaccacatggtgaaacatttccacaaggc acttctgaatgcagtaggagccgtgaaagattggacgaagctcacgaaacttcatatgaa agtgcaaatattgccagtggtaagctggaagaccctgttgatccagtccaagctatgtta ttgcatatgataccccagctggatggtaagccaagccatagtgtggacagtcttgtaaaa gacgacaaaccagaggcagatgctaatcctagtcctaaaaagaaaaagaaagttagctat aaggacgtagctggtgaattgctcaaagattggtga

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