Nicotiana tabacum (common tobacco): 107763320
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Entry
107763320 CDS
T04643
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107763320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107763320
03009 Ribosome biogenesis [BR:
nta03009
]
107763320
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107763320
Spliceosome [BR:
nta03041
]
Complex A
U1 snRNP components
U1 related factors
107763320
Complex B
107763320
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Helicases
107763320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
WW
ERCC3_RAD25_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107763320
NCBI-ProteinID:
XP_016437285
UniProt:
A0A1S3XBH3
LinkDB
All DBs
Position
Un
AA seq
625 aa
AA seq
DB search
MAATATASSAGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPVAPSHGGTA
PQHKSSVSVSSSVQRPSQGQPPDRDDDNEYNRGSNGGWSKLSSGEDIKTARGSELSRDET
SVPKSNSAPAAASNISPYCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILEMRRIRLDQ
ISYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMFTATWPKEVRKIAADLLVNPVQVN
IGNVDELVANKSITQYVEVLSYMEKQRRLDQILRSQEPGSKIIIFCATKKMCDQLARNLT
RPFGAAAIHGDKSQGERDHVLSQFRTGKSPVLVATDVAARGLDVKDIRVVINFDFPTGVE
DYVHRIGRTGRAGATGEAYTFFCDQDAKHASDLIKILEGANQQVPTELRDMASRGGGMGG
ARRQWSSGPGGREGGRGGRYDSGYGGRDGGRGGWGAPSSERSGRDYESDSRDSDRYGHGS
RDTDAPPSFHARSFHETMMQASQRRGRSRSRSPNKGSGWGDTKSRERSRSRSAERFDQAP
RQAPVGRSFHESMMGRSGSSPVASKHRSPSYSDNRSPSAGDCQKGWEKEKSPPRWQGDGK
FGNEPRAYNGEEEEGMIPEDVETRA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactgcaactgcatcttctgctggtccgcgttacgcaccagaggaccccacc
ctcccaaaaccttggaaaggcctggttgatggtaagactggatacctctatttttggaat
ccagagaccaatgttacccaatatgagaggcctgttgctccttcccatgggggtactgct
ccacaacataaatcatcggtatctgtaagttcatcagttcaaaggccttctcaaggtcaa
cctcctgaccgtgatgatgacaatgaatacaacagaggtagcaatggtggctggagcaag
ctttcttctggtgaggatattaagactgcaagaggaagtgagctttcccgcgatgaaaca
tctgtacctaaaagcaatagtgctccagctgctgctagtaacatatctccntactgtcta
tatggaggcgccccaaaaggccctcagctacgagatctggataggggagtagatattgtt
gtcgctacccctggtcgtttgaatgatattttggagatgagaagaattaggctggatcaa
atttcttacttggtgttagatgaagcggatcgtatgctggacatgggatttgaacctcag
ataaggaagattgtaaaagaggtgccaacacgacggcagacactgatgttcacggcgaca
tggccaaaggaggtccgtaaaattgcagctgatctattggttaatccagttcaggttaac
attgggaatgttgacgaacttgttgcaaacaagtctataacacagtacgttgaagtcttg
tcatatatggagaaacaaaggcggctagaccagatcttgagatcccaagaaccaggatca
aaaatcataatcttctgtgcaacaaagaaaatgtgtgaccaacttgctcgcaatcttaca
cgcccatttggagctgctgcaattcatggtgataaatctcagggtgagagggatcatgta
ttgagccagttccgcacgggtaaatcccccgttcttgtcgctacagatgttgctgcccgg
ggcttggatgtcaaagatatcagggtggtgatcaactttgactttcctaccggagtagag
gattatgtacacagaataggaagaactggtcgggctggtgcgactggtgaggcctacaca
tttttttgtgaccaggatgctaagcatgcttcagatcttattaaaattttagaaggagca
aatcagcaagtgcctactgaactacgtgatatggcttctcgaggtggtggtatgggaggg
gctaggcgtcaatggagttctggcccaggtggacgtgaaggaggacgtgggggacgttat
gattccggctatggtggaagagatggaggaaggggtggttggggagcaccatcatcggaa
agaagtggacgtgattatgagtcggattcacgtgacagtgatagatatggtcatggctct
cgtgataccgacgctccaccgagcttccacgctcgtagcttccatgaaacaatgatgcag
gcttcacagagacgtggtcgaagtcggagcagaagcccgaataaaggttcaggatggggt
gatacaaaaagcagggaacgcagtcgcagccgtagtgctgaaagatttgatcaggctcct
cgtcaagccccagtgggacgcagttttcatgaaagcatgatggggcgcagtggatcatcc
ccagtggcctcaaaacaccgatcaccctcttactctgataatcgatctccatcagctggt
gattgccaaaagggctgggaaaaagaaaaatctccacctagatggcaaggtgatgggaaa
tttggcaatgaacctcgtgcttacaatggggaggaggaagaaggtatgattcctgaagac
gtcgaaacaagggcctaa
DBGET
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