Nicotiana tabacum (common tobacco): 107775805
Help
Entry
107775805 CDS
T04643
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107775805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107775805
03036 Chromosome and associated proteins [BR:
nta03036
]
107775805
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107775805
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107775805
PBAF complex
107775805
GBAF(ncBAF) complex
107775805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Tricorn_C1
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
107775805
NCBI-ProteinID:
XP_016451071
UniProt:
A0A1S3YFN1
LinkDB
All DBs
Position
Un
AA seq
641 aa
AA seq
DB search
MPASSSETRNRWRKRKREPLISRKAKAQQDDDVFEEEDDEEDIDQQEIEDDDHRNPSNSV
DRSNYSVELVSEAGNRISEFPLVVRRTVTRPHSSVLNIVATEKAGQCGESRQNGVVLENM
SYGQLQALSAVPADTPALLTEERGEGSGSGSYVISPPQILQGRGVVKHYGSASRIHVVPM
HADWFSPNTVHRLERQVVPHFFSGKSAEHTPEKYMECRNCIVAKYMELPEKHLSVADCHG
IVAGVSADDVTRIARFLDHWGIINYCAVPPKAEALKDVTLYEDSNSDLCVPVAGLKSIDS
LVQFDKPKCCLKARDVYPELVRDFDDDSDFDNSIREMLSELRCNCCSRPVSLSYYQSQKE
IDILLCLDCFHEGGFVTGHSSLDFVKISSMKDYGDLDGDTWTDQETLLLLEGMQLYNENW
NQIAEHVGTKSKAQCILHFVRLPVDGAPLENIELPGASGPSSSFAGEDRNKSYSNLNGNL
AGPSTENLDSDSKFPFENCGNPVMSLVAFLASAVGPRVAAACAHTSLAALSKDDTLTSRN
MTQIDGSTADNGISVGRIHGKDGSPRGDVGNSYQLKDEKPGGQGPWGQHDSGGAAVSTER
VRAAAKVGLAAAAIKAKLFADHEEREIQRLSANIVNHQVIC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcctcctcagagacgaggaatagatggaggaagcggaagcgggagccttta
atttcaaggaaggccaaggcccaacaagatgatgacgtgtttgaagaagaagatgacgag
gaagacattgaccagcaggaaattgaagatgacgaccaccgaaaccctagcaattcagtg
gatcggagtaattactcagttgaattggtatcagaagctgggaaccgaattagtgagttc
cctttagtagtgagacgtactgttacgcggcctcattcgtccgtcctgaatattgtagcg
actgagaaggctgggcagtgtggagagagtaggcagaatggggtggtgttggagaatatg
tcgtatgggcagcttcaggcgctttcagctgtgcctgcagatactcctgccttgttgact
gaggaaagaggagaaggcagtgggagtggttcgtatgtgatcagtcctccgcagatattg
cagggtcgtggtgtggttaagcattatggcagtgcaagtcgaattcatgttgtgccaatg
cacgcagattggttttcacctaatacagtgcacagattggaaagacaagtggtgccacat
tttttctctggaaagtcagctgaacatacgccagaaaaatacatggaatgcagaaattgt
atagttgcaaagtatatggagttgcctgaaaagcacttgtcagttgctgattgccatggg
attgtagctggtgttagtgctgatgatgtaactcgaattgcaaggtttcttgatcattgg
gggatcatcaactactgtgctgttcctcctaaagcggaggccctaaaagatgtcacattg
tatgaggactcaaacagtgatctctgtgttccagtggctggtttgaagtctattgacagc
ttagtccagtttgacaagcctaaatgttgtctcaaggcgagagacgtttatcctgaactt
gtgcgtgattttgatgatgactccgactttgacaactcaatccgagaaatgttgtctgaa
ctacgatgcaattgttgttctcggcctgtttcactgtcgtactatcagtcacagaaagag
attgatattctattgtgtttggattgcttccacgagggtggatttgtcactggtcactct
agcttggattttgtcaaaataagctctatgaaagattatggagatctagatggagatact
tggactgaccaggaaacgctattgcttctcgagggaatgcaactctacaatgaaaactgg
aatcaaattgcagaacatgttggcaccaagtcaaaggcacagtgcatccttcattttgtc
cgcctgcctgtggatggtgccccattggaaaatattgaacttccaggtgcatctggtccc
tcaagttcttttgcgggtgaagatcgtaacaaatcttattcaaatttgaacgggaatctt
gcaggaccaagcactgaaaaccttgattctgatagcaaatttccttttgaaaactgtgga
aatccagtaatgtccctggttgcttttttggcatctgctgtgggaccgagagttgctgca
gcatgtgcccatacttctttggcagcattatctaaggatgatactttaacatcacggaac
atgactcagatagatggatctacagctgataacgggatcagtgtaggaagaattcatgga
aaggatggaagtcctcgtggagatgttggaaattcttatcagctaaaagatgaaaagccg
ggaggacaaggtccatggggtcaacacgattctggaggtgctgcagtatccactgaaaga
gtaagagctgctgctaaagttggtcttgcagctgcagctataaaggcaaagctttttgct
gaccatgaagaacgtgagattcaacggttatctgcaaacatagtcaaccatcaggtaatt
tgttga
DBGET
integrated database retrieval system
