Nicotiana tabacum (common tobacco): 107791649
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Entry
107791649 CDS
T04643
Name
(RefSeq) transcriptional elongation regulator MINIYO
KO
K20826
RNA polymerase II-associated protein 1
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107791649
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107791649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
107791649
NCBI-ProteinID:
XP_016469234
UniProt:
A0A1S3ZY17
LinkDB
All DBs
Position
Un
AA seq
1554 aa
AA seq
DB search
MKNTDPKNPTTQKIFGTVINEDDASHLVGGIVEKGFSEQPLNGPTSWTFAPRPTVLPFPV
PRHRSHGPHWAPKVGDVCGNNDHDDEENEEEEEDFTGINQIGNFAKPVQRKEKKGMDFCN
WREIVASDNSSVPYKREERERKVNSTSKERNAVAEASQNKNNSNERPPDENGNGASLSVE
DGTKSQDVIMEDEHLVQEKEEDMAMDIEQGGVEQSSHSVLPQQKCGNGITEQDEEIIEDM
HPTLQVNAQKCSISANKADASFDSEEVEGRHNASNLESQIDAENRAQLAKMSADEIAEAQ
AELLAKLSPAVLEALKRKGQEKLKREKSYRSGSHLSGEKGSLLDRMKNETSQGTQKKNVE
DDTPKLNASTSVWDEWSKRVESVRELRFSFDGNIVESELEVPKSGVSVAQDLSERDYLRT
EGDPGAAGYTIKEAVALTRSAVAGQRTIALHLIASVLDRAICRIHQNQLGCILRSQDRDG
FNDWEAIWAFILGPEPELALSLRMSLDDNHRSVVLACARAIQCALSFEINEDFFEIVERI
PTLQRDAPTAPVFRSRPEIEDGFVHGGFWKYNTKPSNILPFARDSVENDESERTIQDDVV
VAGQDIAAGLIRMGILQRVQYLLETEPSAALEECLISILIAIARHSPTCADAIMKCQRLV
QTIINRFTSKEQMEISISKIKSVALLRILARSDKENCLEFIKTGIFQKMIWQLYRYTSFD
QWVKSGKEACKLSSALLVEQLRLWKVCVQHGYCVSYFADLFPALCIWLNVPAFEKLIENS
VLSEYAAIAKEAYLVLGALTRRLPIFYSHMQQLDRGTTEEAENWCWAHVGPMIDSALEWI
RLKKIPLLSRLFEWQNEEELNGDIQDSAVSPLLWLISSIMDMLSAVLEAVIPEDNAELRH
GSLPWLPDFVPKIGLEILKNGLMSFSGLVSASHDSSAGSGSFLECLCYLRKINGRETSIA
SSSCLQGLLRVAWCVDKLISLANNEPRDLFAKYQSFTREEETLADGILHCSLPELRTLMT
SLVESNGSKWHHMNSIETFGRGGPAPGIGVGWGAPGGGFWSKHILSAQVDARLFIYLLDV
FPIVSVKDQFTTEGMNTIIQKINSVMGACLLLGPMDSSAVDKLLDFLFQVPTLKYIDFSI
RQFLTLKQGYQSLERVYEEEDYLMLSDVLASHFKKRWLSAKQKRKSAAGDEHVCRKNPKK
GNILLDTIPEEISASIPASQEPKCLVAEWAHQRLHLPLHWFLSPLSVLCSTSHETLDFLK
VAKGGLFFLLGIELMSTSLPAELRTPVRNVPIVWKLHTLSATLLSGMDIFEEENSRDLYK
ALQDVYGQLLDREEKVDAMKLKFKTDIHENYSTFIDNLVEQFAAVSYGDMIFGRQVGVYL
HHFVEAPVRLAAWNALSNACALELLPPLEKCIAATCGYLEPVEDDERMLEAYCKSWVSGA
LDKAASRGSASFTLALHHLSSFVFQTCSRNMLPLRNKLAKSLLRDYSRKKQHESLFVNLL
EYQRPGTISEMPQHSCNVENRLQILKEACEGNSSLLSEVEKLSSVIRRKQHVGS
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacacagaccctaagaatcccaccactcagaaaatttttggaacagttataaat
gaagatgatgcctcccatttagtcggcggcatagttgaaaagggtttttcagaacaacca
ttaaacgggccaactagttggacttttgcccctcgccccactgttcttccttttcctgtg
ccccgtcaccgctctcacggtccacattgggcaccaaaggttggagatgtttgtggtaac
aatgatcacgatgatgaagagaatgaagaggaagaagaagatttcactggaatcaaccag
attggaaattttgctaagcccgtgcaaagaaaagagaagaaagggatggatttttgtaac
tggcgggagatagtggctagtgataatagttctgtgccatacaagagggaagaaagggag
cgcaaggtgaattcgacatcaaaagagcgaaacgctgttgcagaagcatctcaaaacaaa
aacaactctaatgaacgtccaccagatgaaaatggaaatggtgctagtttatctgtagaa
gatggtacaaaatctcaggatgtcatcatggaggatgagcatttggttcaagagaaagag
gaagacatggccatggatatcgaacagggaggtgtggaacaaagtagccattctgtctta
ccacagcagaaatgtggaaatggtatcactgaacaggatgaagaaataattgaggatatg
catcctaccttacaggttaacgctcagaaatgtagcatttctgcaaacaaagccgatgct
agctttgactccgaggaagtggaaggaaggcacaatgctagtaatcttgagagtcaaatt
gatgctgagaatcgagctcaattagcaaaaatgtcagctgatgaaattgctgaagcacag
gctgaattattggcaaaactaagtccagcagttttggaggcactgaaaaggaaaggccaa
gagaagttgaaaagagaaaaatcttatagatccggttctcatctcagtggagaaaagggt
agtttgctggatcggatgaagaatgaaacctcacaaggcacacagaaaaaaaatgtggaa
gatgatactccaaagttgaacgccagtaccagtgtatgggatgaatggagtaaacgagtt
gagagtgtccgagaattaagattttcttttgatggcaatattgtggagagtgaacttgag
gtcccaaagagtggtgtgtccgttgcgcaagatctctccgagcgtgactatctacgaact
gaaggtgatcctggcgcggctggttacaccataaaagaagcagtcgctctcacaagaagt
gcagtagctggacaacgaacaattgctttacatcttattgcatctgtgcttgatagagca
atatgcagaattcaccagaatcagctggggtgtatcttaagatctcaggacagagatgga
tttaatgactgggaggccatttgggctttcatactagggccagaacctgagcttgctcta
tcattgaggatgtctctggatgacaaccacaggtccgtagttctggcttgtgctagagct
attcagtgtgctctttcctttgagatcaatgaggatttttttgaaatcgtggagaggata
ccaactcttcagagggatgcacctactgctcctgtctttagaagtcgaccagagatcgaa
gatggttttgtccatggtggtttctggaaatacaatactaaaccttccaatatacttcct
tttgcccgggattctgtggaaaatgatgaaagtgaacgcactattcaggatgatgttgtt
gttgctggccaagatatagctgcaggactgattaggatggggatccttcaaagggttcaa
tatctcttggagactgagccttcagcagctttggaagaatgcctaatttccatattaatt
gcgatagctaggcattcgccaacatgtgcagatgcaattatgaagtgtcaacggctggtt
caaacgatcatcaacagattcactagtaaagagcaaatggagattagtatctcaaagatc
aagtcagttgcactcctgagaattttggctcgatctgacaaggagaactgcctagaattt
atcaagactggaatatttcaaaagatgatatggcaattgtatcgatatacctcttttgac
caatgggtaaagtctggaaaagaggcttgtaaactttcatcagctcttctggttgaacag
ttacggttgtggaaggtttgtgtgcaacatgggtattgtgtatcatactttgccgattta
tttcctgccttgtgcatttggttgaatgttcctgcgtttgaaaagctgattgagaacagt
gtcctcagcgaatatgctgccattgccaaggaagcataccttgtcctgggtgctttaact
agaagactgccgattttttattcccacatgcaacaattggacaggggtactacagaagaa
gcagaaaactggtgttgggcccatgttggtcctatgattgattctgccctagagtggatc
aggttaaagaagatacctctcctatctcgtctatttgagtggcaaaatgaggaggaattg
aatggcgatatacaggattcagcagtttctcccttgctgtggttgatatcttcaattatg
gacatgctttctgcagtgcttgaagctgtaatccctgaagataatgcagagttgcgccat
gggagtcttccatggctgccagattttgtccctaagattggactagaaattttaaaaaat
ggacttatgagtttttcaggcttagttagtgcaagccatgatagttctgctggcagcggt
tcattccttgagtgtttgtgttatttgagaaaaataaacggacgagaaacgtcaatagcg
tccagtagttgccttcagggattgttgcgagttgcttggtgtgttgataagctgatctca
ctagctaacaatgagcctcgggatctattcgccaaatatcagagtttcacaagagaggaa
gaaactcttgctgatgggattcttcactgctctctgcctgagttaagaactttgatgaca
agtttagtggaatcaaatggttccaaatggcatcatatgaattcaattgagacatttggt
agaggtggtccagccccaggaattggtgtaggctggggtgcccctggtgggggcttttgg
tccaaacacattttatcagctcaagtagatgcacgattgttcatttacttgcttgatgtt
ttccctatcgtatctgtcaaagatcagtttacaactgaaggcatgaacactattatacaa
aaaataaattctgtcatgggagcgtgtttactgctggggccaatggatagttctgcagta
gataagctgcttgatttcttatttcaagttcccactctaaagtacatcgatttcagtata
cgccaatttcttactcttaagcaaggttatcagtctctcgagagggtgtatgaagaagag
gactatttaatgttgagtgatgtcttagcttctcacttcaagaagagatggttgtctgca
aaacagaagcgtaaatctgctgctggagatgagcacgtatgccgaaagaatccaaaaaaa
ggaaatattttattggacaccattcccgaggaaatttctgcatcaatccctgccagccaa
gagcctaaatgtttggtggctgagtgggctcaccaacggttgcatcttcccttgcattgg
tttctcagtccactctcagtgctttgttctaccagccatgagactctcgattttcttaaa
gttgcaaaaggtggactcttctttctcttagggattgaactaatgtccacctcccttcct
gctgagttgcgtacgccagttcgaaatgtgcctattgtatggaaattgcacacgttgtct
gcaactttactttctggaatggacatttttgaggaggaaaatagcagggatctctacaaa
gctctgcaagatgtctatggacagctccttgatagggaagaaaaagttgatgcaatgaaa
ctgaaatttaagacggacatacatgagaactactccaccttcattgacaatctagtggag
caatttgctgcagtttcgtatggtgacatgatatttggtcgtcaagttggagtctatctg
catcactttgttgaagctcctgtgaggcttgctgcatggaatgcactgtctaatgcttgt
gctctcgagcttttgcctcctttggagaagtgcattgccgcaacttgtggatatcttgaa
cctgtcgaggatgacgagaggatgttggaagcttactgtaaatcatgggtttcaggagct
ctagacaaagcagcaagtcgaggatctgcctcgttcactttggccttgcaccatctgtca
tcatttgttttccagacttgctctaggaatatgcttcctttgcgaaacaagcttgccaaa
tctctgctacgagactactcccgtaagaagcaacatgagagcctttttgttaacttactg
gagtaccaaaggccaggcaccatatctgagatgccccagcacagttgcaatgtggaaaat
agattacagattttgaaagaagcttgtgaaggaaattcctcattgttgagtgaggttgag
aagctcagctctgtcattagaaggaaacagcatgtgggaagctaa
DBGET
integrated database retrieval system
