Nicotiana tabacum (common tobacco): 107808652
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Entry
107808652 CDS
T04643
Name
(RefSeq) DNA glycosylase/AP lyase ROS1 isoform X1
Organism
nta
Nicotiana tabacum (common tobacco)
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Paralog
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
107808652
NCBI-ProteinID:
XP_075110135
UniProt:
A0AC58UKW5
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Position
5:complement(125789978..125800317)
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AA seq
1816 aa
AA seq
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MWGEKIGFLPVFQSCKMDVGQGSSIEEMKDLQTNTSWIPATPGKPGFATLPPISKSRQEN
QPAQVDWSELQMKKAAVAHAADATAEAQNASAYNGSTSSVTVDQCFASWEAAVGTKSEMY
GGGIKMCNNFSSDNVDMWTNVSFGDLLAMAHAAGTTPAAENAKDDTAYSARSYFKPLVSS
QSADGSSTFPSSPFNLNSPLRMTDAISSNIAFQFEPVTPDLIKSKGQASNASNLDINVTT
LPRGVQSNEDTIKRTEANELQQSREQSELVLNQSELQENHKLDMEGKQDSELNNTPEQKP
RRRKHRPKVVVEGKPKRTPKPRTEKQPGSVETKTEKRKYVRRNKVGSPAPTSAEEVHNTI
DNGKTPSSKETPPAKRKYVRRNQVKKSTEQPSEEGSSGTTDQKKVSPPRKSCRKTLNFEF
ERQASDENSSYRPSTLDLHANQTESTAQCVQSAQLGQGMEAPHEKTGVGTTYNIKCSLNQ
ELRNYLSQHEVQYLGSPSLDKVGWNHDEVMVGNQNESTRGNYRINFSDLTRDKQASILQM
TPQSLNCSNCSSSTCLPHGKGLKRQHSYRTNEAQFYSLNARGVYFNSMQAYQAILPANEP
EVYSNLGMHCPATYKKKRTEEGHSSAASYIKHFTSEINHVPSSRCNISGSPSNNSSTNIA
YNRLQNSDFVPAVVEAGKLRKGRSKGATQVHELASVHEIYKQFQTSTSKYATKCRLGERY
KTSHLSNACMEAPTADTRAPMKTKKQSKKSTFVSSTASSMYIHQQFTANARGPPPALTWR
GMSPIDEIAEHLQRLDLNRESSQIQGQHGNVTYHTKFQGESALVLYQRDGSIVPFGSSLV
RKRKPRPKVDVDDETDRVWKLLLQDINSEGVDGTDEDKAKWWEEERRVFNSRADSFIARM
RLVQGDRRFSPWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAAHFPLKTKSSTQKHEGRT
AVIIEEPEVCATDPIVSIRWHEDQANQSSRCQDSWRVYNTDSNEEKTAVNSSESSENSTD
CIKSAEHSVILQSDSSREGSDLYHESTLMGFRDKKELNDLPSSPSSVVSSENSAVVQTSE
RTDTSSFCSSTSFLKLLQMAGTSGARGTTCTEYLQEGGNFPVLRKERSALEQPGSLVECA
HPERYTTLRSETYISCNNPQNKLDTETVNNAEVNVELQFQTEDRNCNVPQVPEAPTSSET
NIEVTERASIVFDSCKYEQRAVESNLKNVSDHACSKVDSVNENPSKAKKGQLGKEKENID
WDSLRLEAQANGKKRERTANTMDSLDWEAVRCANVNEIAHTIKERGMNNKLAERIKNFLN
RIVSEHGSIDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIA
VRLGWVPLQPLPESLQLHLLELYPILESIQKYLWPRLCKLDQRTLYELHYHMITFGKVFC
TKSKPNCNACPLRGECRHFASAFASARLALPAQEEKSIVSATENKASNNNPREKFTHLPL
PLPPGNQQPVEHQKLINSAPIIEVPATPEPIVELPATPEQEQIQAPEIDIEDTYYEDPCE
IPTIEVNMAEFTQNLKKYVENNMELHQVEMSNALVALTSEAASIPVPKLKNVSRLRTEHQ
VYELPDSHPLLEGLDKREPDDPCSYLLAIWTPGETANSFQPPETQCNSQESGKLCENETC
SSCNSIREAHSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPINVPRDWL
WNLPRRTVYFGTSIPTIFKGLTTESIQHCFWRGFVCVRGFDQKTRAPRPLMARLHFPASK
LNKTKGKTNEDHGAAH
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtggggagaaaagattggatttttaccagttttccagagctgcaaaatggatgtaggc
caaggcagctcgattgaagaaatgaaggatttacagaccaacacttcatggattccagcg
actccagggaagccagggtttgcgacattgccaccaattagcaagagtaggcaggaaaac
cagccagctcaggttgattggtcagagttgcagatgaaaaaagcagcagtggcacatgct
gctgacgccacagccgaagctcaaaatgcatctgcttacaatggttcaacaagttcagta
acagtagatcagtgcttcgccagctgggaagcagcagtaggcacaaaatcggaaatgtat
ggaggtggtataaagatgtgcaataacttctctagtgataacgtagacatgtggactaat
gtgtctttcggagatctcttggcgatggcacatgctgctggcaccacgcccgcagctgaa
aatgcaaaagatgatacagcttatagtgccaggagttatttcaaaccgctcgtcagttct
cagagtgcagatggaagctctacttttcccagctcccctttcaacttgaattcaccccta
agaatgacggatgcaatctcgagcaacatcgcattccagttcgaaccagtaacaccagat
ctgatcaagagtaaagggcaagcatctaatgcgtcaaacctagacattaatgttactaca
ttaccaagaggtgtacagtcaaatgaagatacaataaagagaactgaagcaaatgaactc
caacagagcagagagcagtcggagctggtcttaaatcaatcagaattgcaggagaatcac
aagcttgacatggaaggcaaacaggatagtgaactgaataatacaccagagcaaaaacca
agaagaagaaaacacaggcccaaggtggttgtagaaggcaagcctaaaaggactcctaaa
ccaagaaccgaaaagcagcctggttcagtggagacaaaaacagaaaagaggaagtatgtc
cgaagaaacaaggttggcagccctgcacccacttctgctgaagaggtacacaatacaatt
gacaatggaaagactcctagttccaaagaaaccccaccagcaaagaggaagtacgtcaga
agaaatcaagttaagaagagcacagaacaaccctctgaagaggggagcagtggaacaact
gatcagaaaaaagtttctcctcctagaaaatcctgcaggaaaacgttgaattttgaattt
gaaagacaagcaagtgatgaaaactcatcatacaggccctcaactttggatttgcatgca
aatcaaaccgaatcaactgcacaatgtgtacagtctgcacaacttggacaaggtatggaa
gccccccatgaaaagacaggagtgggaacaacttataacatcaaatgttccctgaaccag
gagctgagaaattacttgtcacagcatgaagtgcagtaccttggttctccgtctctggac
aaggttggctggaatcatgatgaagtcatggttggtaatcaaaatgaaagcacaagagga
aattatagaatcaatttttcagatttaactcgtgacaaacaggcaagcatactacaaatg
acaccacagagcctgaattgttccaactgtagcagcagcacatgcttgccacatgggaaa
ggcttgaagagacagcattcgtatagaactaatgaagcacaattctacagcttaaatgcc
agaggagtgtatttcaattccatgcaggcttatcaagcaatccttccagcaaatgaacct
gaagtttatagtaacctagggatgcattgtcctgcaacttacaagaaaaagagaacagaa
gagggccacagctcagcagcatcttacattaagcattttactagcgaaattaaccatgtg
ccttcatcgcggtgcaatatcagtggttcccctagcaacaattcttcaaccaatatagcc
tacaacagactgcagaactccgattttgtgccagcagttgtggaagcagggaagttaagg
aaggggagatcaaaaggcgcaactcaagtgcatgagttagcatctgtgcatgaaatttac
aaacaatttcagacttctacatccaaatacgcaacaaaatgcagacttggagaaagatac
aagacttcacatctatccaatgcatgcatggaagctccaactgcggacacccgagcacca
atgaagacaaaaaagcaatcaaagaaaagcacctttgtcagctcaacagcttccagcatg
tacatccatcaacaattcacagcaaatgcaaggggtcccccaccagctttaacatggaga
ggcatgtctccaattgatgaaattgcagaacacttgcagcgtcttgatttaaacagagaa
agcagccaaattcaaggtcaacatggaaatgtcacctaccacaccaagtttcaaggggag
agtgcccttgttctttatcaaagagatggaagtattgttcctttcggaagttcattggtt
aggaaacgaaaaccacggccaaaagttgatgttgatgatgagactgatagggtatggaag
cttttgctgcaagatataaacagtgaaggcgttgatggaacagatgaagacaaggcaaaa
tggtgggaagaagaacgtagagtgtttaatagtagagcagactcatttattgcgcgaatg
cgtcttgtccaaggagacaggcgcttctcaccttggaagggatctgttgtggactctgta
gttggagtatttcttacacagaatgtttcagatcacctttccagttctgcattcatgtca
ctcgctgctcactttcctctgaagacaaagagcagtactcagaagcatgaagggagaaca
gctgtcataattgaagaacctgaagtgtgtgcaacagatcccattgtttctatcagatgg
catgaagatcaagcaaatcagtcaagtcgatgtcaggattcctggagagtctataataca
gattcaaatgaagaaaaaacagctgtcaacagctctgaatcaagtgaaaatagcacagat
tgcataaagtcagcagaacattcagtaattctgcaatcagattcttctagagaaggttca
gatctgtatcatgaatcaacacttatgggtttcagagataaaaaagaattgaatgatttg
ccttcttctccgagttctgtagtttcttctgagaactctgcggttgttcaaacttcagaa
agaactgacacaagcagcttttgcagctccacttcttttttgaagctattacagatggca
ggaacttcaggagcacgaggaaccacgtgcactgaatacttacaagaaggtggaaacttc
ccagtccttcgcaaggaacgtagtgccctcgaacaacctggatcattggtagaatgtgca
catccagaacggtacacaacactgaggagtgaaacttatatctcatgcaataaccctcaa
aataagttggacacagagacagttaataatgcagaagtcaatgtcgaactacagtttcaa
actgaagatagaaattgcaatgtaccccaagttccagaagcaccaacctcttcagaaacc
aatatagaagtcacagaaagagccagcatagtttttgattcatgtaagtatgagcaaaga
gctgtggagtcaaacttgaaaaatgtcagtgatcatgcttgtagcaaagtagacagtgta
aatgaaaatccttctaaagcaaaaaagggacagctcgggaaggagaaagagaacattgat
tgggacagcttacggttagaggcccaggccaacggcaagaaaagagaaaggacagcgaac
acaatggattcactggactgggaagcagtgaggtgcgcaaatgtcaatgagatagcccac
acaattaaagaacgaggaatgaacaacaagctggcagagaggatcaagaattttcttaac
cggattgttagtgaacatggaagcattgatcttgaatggctgagagatgttccaccagac
aaagcaaaagagtatctattgagcataaggggcttgggtctgaagagcgtggagtgtgtg
agacttttaacacttcaccacctagctttcccagttgacacaaatgtagggcgtattgct
gttaggctagggtgggtgcccctgcagccgttgcccgagtcactacaattgcatcttctt
gagctgtacccaatactggagtcaatccaaaagtacctatggccacgtctctgcaagctt
gatcaaagaacattatatgagctacattaccatatgatcaccttcggaaaggtcttctgt
acaaaaagcaaacccaattgcaacgcatgtccactgagaggagaatgcagacactttgca
agtgcctttgcaagtgcgaggcttgcccttcccgcgcaggaagaaaaaagcattgtgtct
gcaacagaaaacaaagcctctaacaacaatccaagggaaaaattcactcacctgcctctg
ccattacctccgggtaatcaacaaccagtggagcatcagaagttgatcaactcagctcct
attattgaagtgccagcaacaccagagcccattgttgaacttcctgccacacctgagcaa
gagcaaatacaagcaccagaaattgacatagaggacacttactatgaagatccttgtgaa
attcctacaattgaagtgaatatggcagagttcactcaaaatttaaagaagtatgtcgaa
aacaatatggagcttcatcaggtagaaatgtcgaatgccttagtagccttaacttcagaa
gctgcatcaattcccgtgcctaaacttaagaatgtcagcaggctgagaactgaacatcaa
gtatatgaacttccagattctcatccacttttggaagggttggacaaaagagaaccagat
gatccttgctcctatcttcttgctatttggacaccgggtgaaacagcaaattcttttcaa
cctccagaaacacagtgcaactctcaagaatctggcaaactgtgtgaaaatgagacatgt
tcctcatgcaacagcatacgtgaagcacattctcagacagtaagagggactcttctgata
ccatgtagaacagctatgagaggaagctttccactcaatggtacctattttcaggtcaat
gaggtgttcgcagaccatgactccagcctcaacccaattaatgtcccaagggattggctg
tggaatctcccacggcggactgtctactttggaacctcaataccgacgatattcaaagga
ttaaccacagaaagtatccaacactgcttttggagagggtttgtctgtgtgcggggattt
gatcagaagacacgagcacctcgaccactgatggcacggttgcactttccagccagcaag
ttaaacaagactaaaggaaaaacaaatgaagaccatggagcagcacactga
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integrated database retrieval system
