Nicotiana tabacum (common tobacco): 107823650
Help
Entry
107823650 CDS
T04643
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03022
Basal transcription factors
nta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107823650
09124 Replication and repair
03420 Nucleotide excision repair
107823650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107823650
03400 DNA repair and recombination proteins [BR:
nta03400
]
107823650
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107823650
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107823650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
Motif
Other DBs
NCBI-GeneID:
107823650
NCBI-ProteinID:
XP_016505821
UniProt:
A0A1S4CXH7
LinkDB
All DBs
Position
Un
AA seq
413 aa
AA seq
DB search
MNNEEKRFNREEEDEDEESGRGREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQY
RRRLRTATAARVQKGLIRYLYIIIDFSRAAAEMDYKPSRMVVVAKQVEAFVREFFDQNPL
SQIGLVILKDGVAQCLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLNQIPSYG
HREVLILYSALSTCDPGDILETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYYVAL
DEPHLKELVLEHAPPPPAIAEFAVANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPR
CKARVCELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSLLKDIHKLPKNCFGCQ
QSLLNPGNLPGLQVACPNCKHHFCLDCDIYIHESLHNCPGCESLNSKTISDME
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgaagaaaaacgatttaaccgagaagaagaagatgaggatgaggaaagtggg
agaggtcgagaagcatgggaaagaacttatgcagatgaaagatcatgggagtctttgcag
gaggatgaatctggtctccttcgtccaattgacaacaaaactctatcccatgctcagtat
cgacgacgtctccgcactgcaaccgctgcacgagttcagaagggcctgattcgctacctt
tacattatcattgatttctccagggcagctgcagaaatggattataagccaagccgaatg
gttgtagttgctaagcaagtggaggcttttgtaagagaattttttgatcagaatcccctc
agtcagattggcttggtgatcttgaaagatggagtagctcagtgtttaacagatcttggt
ggcagtccggaggctcatatcaaagcattgatgggtaaattggggacctcaggtgatgca
tcccttcagaatggcctagatcttgtgtgtgacctcctaaaccagatcccatcatatggt
catcgtgaagtccttatcttgtattctgctcttagcacatgtgatccgggggatatactc
gaaaccatccagaaatgtaaagcgtctaagataaggtgctcagtaattggtctctctgcc
gaactctatatatgcaagcatctctgccaagagactggtggaatgtattatgttgcgttg
gatgagccccatttaaaagagttggtattagagcatgctccacctcctccagcgattgca
gagtttgctgttgcaaatttgatcaagatgggattcccccaaagagcagcagagggtgtc
atttcaatttgttcatgtcataaagaggctaaggttggtggtggatacacttgtccgaga
tgcaaagcacgcgtatgtgagctgcctactgaatgttgtatctgtggactgacccttgtg
tcttctccacatttggcaaggtcatatcaccacctgttcccaataaggccatttgatgat
gtttcaccttcacttctgaaagatattcacaagttaccaaagaattgctttggttgccag
caaagtctcctaaatcctggaaatttgccaggtctacaggttgcttgtccaaactgcaaa
caccacttctgccttgattgtgatatttatatacatgagagcttgcacaattgtccaggt
tgtgagagcttaaattccaagaccattagtgatatggaatga
DBGET
integrated database retrieval system
