Caenibius tardaugens: EGO55_14715
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Entry
EGO55_14715 CDS
T05741
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ntd
Caenibius tardaugens
Pathway
ntd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EGO55_14715 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntd03400
]
EGO55_14715 (uvrB)
DNA repair and recombination proteins [BR:
ntd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EGO55_14715 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EGO55_14715 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_16
UB2H
SWI2_SNF2
Microtub_bd
AAA_33
DUF87
SRP54
Motif
Other DBs
NCBI-ProteinID:
AZI37057
UniProt:
U2YI44
LinkDB
All DBs
Position
complement(3139259..3141445)
Genome browser
AA seq
728 aa
AA seq
DB search
MAELVIRRGLEEPDTSGTFVPHKPARPEKTDGGKPFRIVSEYAPSGDQPTAIAELVQAVG
DGEKTQVLLGVTGSGKTFTMAKVIEHVQRPALILAPNKILAAQLYGEFKSFFPDNAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMIFDLKKGDTADQREIIRKLVALQYKRNDAAFARGNFRVRGDNLEIFPSHYED
MAWRISFFGDDIEEIAEFDPLTGKKGASLDKVRIYANSHYVTPGPTMKQASEAIKFELSE
RLKELNAEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNALLFVDESHQTVPQVGAMARGDHRRKLTLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
VAVSATPGNWEMEQTGGVFAEQVIRPTGLIDPPVEIRPVEDQVQDCINECRETAARGYRT
LVTTLTKRMAEDLTEFMHEAGVRVRYMHSDVETLERIELIRDLRMGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLVQTIGRAARNVDGRVILYADRMTGSMERAIAETD
RRRDKQRAYNEEHGITPQTIRRGIADIVAHTAAQDGVTVDIDAEGRNNLVGHNLRAYIEE
LEAKMRAAAADLEFEEAGRLRDEIRRLEAEELGLPEAERKAPVAGRSNEGKPGTRKMRYG
KVQRKWGR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacttgtaatccgtcgcgggctggaagagccggatacctccggcacctttgtc
ccccacaaaccggcacggcccgagaagacagacggcggcaagccgttccggatcgtgtcc
gaatacgcgccatcaggcgatcagcccaccgccattgccgaactggtgcaggcggtcggc
gacggggaaaagacgcaggtgctgctgggcgtcaccggatcgggcaagaccttcacgatg
gccaaagtcatcgaacatgttcagcgccccgccctgattcttgccccgaacaagattctc
gctgcccaactttatggcgaattcaaaagcttcttccccgataatgcggtggagtacttc
gtcagctattacgattattaccagccggaagcctacgttccgcgcagcgacacctatatc
gagaaggaaagctcggtgaacgaggcgatcgaccggatgcgccactccgccacccgtgca
cttctcgaacgcgatgacgtgatcatcgtggcgtcggtctcgtgcctttacggtatcggt
tcggtcgaaacctattccgcgatgattttcgatctcaagaaaggggatacggccgaccag
cgcgagatcatccgcaagcttgttgccctgcagtacaagcgcaatgatgccgcgtttgcc
cgcggcaatttccgcgtgcgcggcgacaatctcgaaatttttcccagccactatgaggat
atggcgtggcggatcagtttcttcggtgacgatatcgaggaaatcgccgaattcgatccc
ctgaccggcaagaagggggccagcctcgacaaagtccggatttacgccaattcgcactac
gtcacgcccggtccgacaatgaaacaggcgagcgaggccatcaagttcgaactctccgaa
cggctcaaggaacttaatgccgaagggcgtctgctcgaagcacaaaggctggaacagcgc
accaatttcgatctcgaaatgatcgccgccaccgggtcttgcgcggggatcgagaattac
agccggtttctcaccggccgccttcccggagaaccgccgccgacgctgttcgaatatctg
ccggataacgcgctgctgtttgtcgatgaaagccaccagaccgtgccgcaggtcggcgcc
atggcgcgcggggaccatcgccgcaaactgactctggccgaatacgggtttcgtctgccc
agctgtatcgacaaccgcccattgcggttcaacgaatgggatgcgatgcgcccgcaaacc
gtcgccgtttccgccacccccggcaattgggaaatggaacagaccggcggcgtcttcgcc
gaacaggtgatccgccccaccggcctgatcgacccgccggtggaaatccgcccggtggaa
gatcaggtccaggactgtatcaacgaatgccgcgaaacggcggcgcgcggctatcgcaca
ctggttaccacgctgaccaagcgcatggccgaagatctgaccgaattcatgcacgaagcc
ggtgtgcgcgtacgctacatgcattccgatgtggaaacgctggaacgcatcgaactgatc
cgcgatttgcgcatgggggtttacgatgtgcttgtgggcatcaacctcctgcgcgaaggg
ctggatattcccgaatgcgggctggtctgcattctcgacgccgacaaggaagggttcctg
cgcagcgaaacctcgctggtgcagacgattggccgcgccgcgcgcaatgtcgatggccgg
gtaatcctctatgctgaccgtatgaccggcagcatggaacgggccatcgcggaaaccgac
cggcgccgggataaacagcgcgcctacaacgaagaacacgggatcaccccgcaaacaatc
cggcgcggcattgccgatatcgtggcgcataccgcggcgcaggacggggttactgtcgat
atcgatgcagaaggccgcaacaatctcgtcgggcacaatctgcgtgcctatatcgaagaa
ctggaagcgaaaatgcgcgccgccgccgctgatctggaattcgaagaggccgggcgattg
cgcgatgaaatccgccgtctggaagcggaagaacttggtttgccagaagccgaacgcaag
gctcctgtcgccgggcgcagcaacgaaggcaaacccggcacgcgcaaaatgcgttacggc
aaggtacagcgcaaatgggggcggtag
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