Neurospora tetrasperma: NEUTE1DRAFT87562
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Entry
NEUTE1DRAFT87562 CDS
T03451
Symbol
NEUTE1DRAFT_87562
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nte
Neurospora tetrasperma
Pathway
nte03022
Basal transcription factors
nte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NEUTE1DRAFT87562 (NEUTE1DRAFT_87562)
09124 Replication and repair
03420 Nucleotide excision repair
NEUTE1DRAFT87562 (NEUTE1DRAFT_87562)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nte03021
]
NEUTE1DRAFT87562 (NEUTE1DRAFT_87562)
03400 DNA repair and recombination proteins [BR:
nte03400
]
NEUTE1DRAFT87562 (NEUTE1DRAFT_87562)
Transcription machinery [BR:
nte03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NEUTE1DRAFT87562 (NEUTE1DRAFT_87562)
DNA repair and recombination proteins [BR:
nte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NEUTE1DRAFT87562 (NEUTE1DRAFT_87562)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
20831041
NCBI-ProteinID:
XP_009854295
JGI:
Neute_matA2_87562
UniProt:
F8MX58
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSLGGQQLLEYLEKLPGTAFRRLYQSPATALAIFRRMLSYHEGGGKIHCDRTIAALRSLH
ILQVSPPSKDRTQEIQITASFKKGLQLAFEGGGEDGSFGVPSSLPVDPSIDIAYLDKYAR
KKWDDILHYVVNSLGVHGSSEGVSGPKASVKELLLAGRLVERRPDTRTGIGITQAGFTFL
LQESNAQVWTLLLLWLEAADHTADSGMDSIDMLSFLFMLSSLELGTAYDTSALTETRRNM
LPSLVDFGLIYFPRDTRQFFPTRLATTLTSTASALRTVSSAFTAATANPSGEPGTTTSTS
GGPAATPDKTQTAAKGIIIETNYRIYAYTTSPLQIAVLALFCQLNMRFPNMVSGRLTRDS
IRQAIGFGITADQIISYLHAHAHQQMVREATVTGKPVLPPTVVDQIRLWQLENERMQTTA
GFLFKDFESTEEYAALSRYAEEIGVLVWKNDKRQLFFASKHEQLRDYLKSRKKGE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcggcggacaacagctcctcgagtacttggagaagctgccaggtacagctttt
aggagactgtaccagtcacctgcgacagctttggccatcttccgccgtatgctgtcttat
catgagggcggcggaaagatacattgcgatcgcaccattgccgctctccgatccctccac
atcctccaggtctcaccaccaagcaaggaccgaacccaagaaatccaaatcacggcgagc
ttcaagaaaggcctacaactggccttcgaaggcggcggcgaagatggcagctttggcgtc
cctagttctctccccgtcgatccctccattgacatcgcctacctcgataagtacgctcgg
aagaagtgggacgacatcctccactacgttgtcaacagtcttggggtccacggcagctca
gaaggggtcagcggacccaaggccagtgtgaaggaactgctcttggccggacgcctcgtc
gaacgacgccccgacacccgtacaggaatcggaattacgcaagccggtttcaccttcctc
ctccaggagtccaacgcccaagtatggacgctcctcctcctctggctcgaagcagccgac
cacacggccgactcgggcatggacagcattgacatgctctccttcctcttcatgctcagc
tcgcttgagctcggaactgcctatgacacatcagccctgaccgagacgcggcggaatatg
cttccctcgctcgtcgacttcgggctcatctacttcccgcgcgacacgcgccagtttttt
cccacccgcctggccaccacactgaccagcaccgcctcggccctgcgcaccgtctcctcg
gctttcaccgccgcgaccgccaacccctcgggcgagcccggcaccacgaccagcaccagc
ggcggccccgccgccacccccgacaaaacacagacagcagccaagggcatcatcatcgag
accaactatcgtatctacgcctacaccacctccccgctacaaatcgccgtcctagctctc
ttctgccagctcaacatgcgtttccccaacatggtttcgggccgcctaacccgcgactcc
atccgccaagcgattggcttcggcatcaccgccgaccaaatcatctcctacctacacgcg
catgctcatcaacaaatggtgcgcgaagccacggtcacgggtaaaccggtgcttcccccg
acggtggtggaccagattcgactttggcagctggagaacgaaaggatgcaaaccacggcg
ggtttcttgttcaaggactttgagagcacggaggagtacgcggcgctgagcaggtatgcg
gaggagattggcgtactggtgtggaagaacgataagaggcagctcttctttgccagcaag
catgaacagttgagggattatctgaagagtcggaagaagggggagtaa
DBGET
integrated database retrieval system
