Nicotiana tomentosiformis: 104089919
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Entry
104089919 CDS
T05025
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 9-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104089919
03036 Chromosome and associated proteins [BR:
nto03036
]
104089919
Enzymes [BR:
nto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104089919
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
Pre-60S particles
Helicases
104089919
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104089919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104089919
NCBI-ProteinID:
XP_009593230
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MASLSTPLRYSKMNSLFLLRNTSSSLTSKRVTLNSVSHIFSTDKFIPRNALKVSQIHSFT
TSVTPSAAVSNWVSGNFGYSVRAFNVAATAFADLEEECDVDNGVGLEISKLGISEEIVSA
LAQRGITSLFPIQKAVLEPAMQGSDMIGRARTGTGKTLAFGIPIMDKIIKFNNKKGRGRN
PLALILAPTRELARQVEKEFYESAPVLDTLCVYGGVPIQRQMSTLQRGADIVVGTPGRII
DLLKRGSLNLSEIQFVVLDEADQMLNVGFAEDVETILENVRQKHQTMMFSATMPSWIMKI
TNKFLKKPIHIDLVGDSDQKLADGISLYSIACEMRQKPAVLGPLISEHAKGGKCIVFTQT
KRDADRLASSMQKTLRCEALHGDITQSQRERTLSGFRQGQFNVLVATDVAARGLDVPNVD
LVIHYELPNSSEIFVHRSGRTGRAGKKGSAILMHSSKQHRDVKGIEHDAGCRFTELPSIK
VEAGAADMYSDMGKGSDRFGSYGGTMRSRSGDFGGGRSGGYGNKGSRFGGEGASSSRTGG
YSGTGSGRSGGGYGGTSSGRSGKFGGSGGSKRLGGFRNFGSGRSSRFGDSQSDRNNRSSR
FDDFGDGKDSGDQSSGRNSISRRRAPWDFSINR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctctccactcctttaagatacagcaaaatgaatagtctttttctactgaga
aacacttcatcttcactaacctcaaaaagggtcaccttaaattcagtttcccatatcttt
agtactgataaattcattccaagaaatgctcttaaagtttcacaaattcacagctttacc
acttctgtaactccatcagcagcagtgtcgaattgggttagtggtaattttgggtatagt
gtgagggcatttaatgtggctgctactgcatttgcagatttagaagaagagtgtgatgtt
gataatggggttgggcttgagatatcaaagcttggtatttctgaggaaattgtttctgct
ttggctcaaaggggaattacttctctttttcctattcagaaagctgttttggaaccagca
atgcaggggtcggacatgattggccgagctagaactggaactggaaaaacactagctttt
ggcattcctatcatggataagatcatcaaattcaacaataaaaaaggacggggaagaaac
cctttggcattgatcttggctcccactagagaacttgcacggcaggtggagaaagaattt
tatgagtctgctcctgttttggatacgctgtgtgtttatggtggtgtccccattcaacgc
caaatgagtactcttcaaaggggtgcagacattgttgttgggacacctggtcggatcatt
gatctgcttaagagggggtccttgaatttatcagaaatccagttcgttgttctagatgaa
gctgatcagatgcttaatgtgggcttcgcggaggatgttgaaaccattcttgaaaatgtt
cggcagaaacatcagacgatgatgttttcagccacaatgccaagttggataatgaaaatt
accaacaagttcttgaagaagccaattcacattgatcttgtaggggattctgaccagaaa
ttagccgatggcatttccttgtattcaattgcttgtgagatgcgtcagaaaccggcagtt
cttggacccttaatatcagagcatgcaaaaggaggcaagtgtattgtctttactcaaaca
aagcgtgatgctgataggttggcgagttcaatgcaaaaaactttgagatgtgaggctttg
catggggatatcacacaaagccagagggagagaactctgtccggttttcgacaaggtcaa
ttcaatgtattggtggccactgatgttgctgctcgagggcttgatgtacctaatgttgat
ctggtgatacattacgaacttccaaactcttcagagatctttgttcatcgatctggtcga
actggacgtgctgggaagaaaggaagtgccattctcatgcattcctcaaagcagcatagg
gatgtgaaaggtattgagcatgatgccggatgcagatttactgagctcccaagtattaaa
gtagaggctggagcagcagacatgtatagtgacatgggcaaaggcagcgaccgctttggt
tcctatggaggcaccatgcgtagtcgatctggtgattttggtggaggtcgttctggtggc
tatggaaataaaggcagcaggtttggtggagaaggtgcttcatcttctcgaacaggtgga
tacagtggaactggttcaggaagatcagggggtggctatggtggaactagctcgggccgc
tcaggaaagtttggtggttctggaggctcaaaacgtttgggtggtttccgtaattttggt
tcgggccgttctagtagatttggagattcacaatctgaccgcaataaccgttcaagccgt
tttgatgacttcggagatggcaaggatagtggtgatcagagttcagggaggaactccatt
tcaaggaggcgtgccccctgggacttctccattaatagatga
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