Nicotiana tomentosiformis: 104094564
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Entry
104094564 CDS
T05025
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104094564
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104094564
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104094564
NCBI-ProteinID:
XP_009598821
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MSSLALVLTLLFLGISTLQAEYYAPLPYSYAPNTKKTMNVIDSCWRTKSNWAKNRRALAD
CAVGYGKAAIGGKFGAIYVVTNPLDDPVNPKPGTLRYGVIQSKPLWITFAKNMVITLKNE
LMINSYKTIDGRGAKVEIAYGPCITIAHVSHVIIHGISIHDCKPGKKGIVRDSPVHAGHR
GGADGDGIDIFQSSHIWIDHCYLARCTDGLIDVIHASTAVTISNNYFTQHDKVMLFGHND
NNIEDKVMKVTVAFNYFGPGLIERMPRVRLGYAHVANNRYEKWLMYAIGGSANPTIFSEG
NYFMAYKSTQVTKREAKNGWKNWKWRSSKDKFMNGAYFIPSGYGSTNPYYSKAQSFPVAD
GSMVPSLTADAGPLRCTSYKC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttagcacttgtacttactcttctttttttgggtatctcaactttacaagct
gagtattatgcacctcttccttatagttatgcacctaataccaaaaaaactatgaatgtg
attgattcttgttggcgtaccaaatcaaattgggccaagaaccgccgtgcattggctgat
tgtgccgtcggctacggcaaagctgctatcggaggtaaatttggtgccatatatgtcgtt
actaatccattggacgaccccgtaaaccctaaaccaggtacactaagatatggtgtaatc
caatccaaaccactatggattactttcgccaaaaacatggttataacactaaagaatgag
cttatgataaatagttacaagactatagatggaagaggagctaaagtggagattgcatat
ggaccttgtatcacaattgcacatgttagccatgtgattatacatgggattagcatccat
gattgtaagcctggtaagaagggcattgtgcgggatagtccggtgcatgccggccatcgt
ggcggtgctgacggagacggtattgatatttttcaatcttctcatatttggatcgaccat
tgctatcttgcacgttgcaccgatggtcttattgacgttattcatgcttctactgctgtt
accatttccaacaactacttcactcagcatgacaaagttatgttatttgggcacaatgat
aacaatatagaagacaaggttatgaaagtcacggtagccttcaactactttggccctggt
ttaatagaacgaatgccaagagttaggctaggttatgctcatgtggccaacaatcgctac
gaaaaatggttgatgtatgctattggtggaagtgcaaatccaaccatcttcagtgaagga
aattatttcatggcatataaatccacacaagttacgaagagggaagcaaagaatgggtgg
aagaattggaagtggaggtcttcaaaggataaattcatgaatggagcatattttatacca
tctggatatggaagtacaaatccatattactcaaaggctcagtcatttcctgtggctgat
ggatctatggttccttctttaactgctgatgccggacctttacgttgcacatcctataaa
tgttaa
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