Nicotiana tomentosiformis: 104100471
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Entry
104100471 CDS
T05025
Name
(RefSeq) histone deacetylase 9
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03082
ATP-dependent chromatin remodeling
nto03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104100471
03083 Polycomb repressive complex
104100471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104100471
Enzymes [BR:
nto01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104100471
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
104100471
HDAC complexes
Sin3A-HDAC complex
104100471
BRAF-HDAC complex
104100471
REST complex
104100471
SHIP complex
104100471
MiDAC complex
104100471
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
104100471
Heterochromatin formation proteins
Other heterochromatin formation proteins
104100471
Chromatin remodeling factors
NuRD complex
104100471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
104100471
NCBI-ProteinID:
XP_009605994
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYGLHNKMEVYRPHKAYPVEL
AQFHSADYVEFLNRITPDTQHLFPSEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDMKDTGERDGRFYSINVPLKDGIDDGIFTRLFKT
IIAKVVETYSPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWALETGVLLDTELPNEIPDNDYIKYFGPDYSLKLPGGHIENLNSKSYIGTIK
MQVMENLRCIQHAPGVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKHIQRDDEYYEGD
HDNDNHMDDA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccaaggacaaaatctcctacttctacgacggcgatgtcggaagcgtgtacttc
ggtccgaaccatccaatgaagccgcacaggttgtgtatgactcatcatctggttttagcc
tatggtcttcacaacaagatggaagtctataggcctcataaagcatacccagtggagcta
gcgcagtttcattcagctgattatgttgagttcttgaaccgaattacccctgatacccag
cacttgttccctagtgaaatggctagatataatcttggagaagattgccctgtatttgac
aacttattcgagttttgccaaatttatgctggcggaacaatagatgctgcacgcagattg
aataatcagctttgtgacattgctataaattgggctggtggattgcatcatgccaagaaa
tgtgctgcttcaggattttgctatataaatgacctagttctgggaatattggagctactg
aagtatcatgcgagggtgctgtatattgatattgatgtgcatcacggtgatggtgtagaa
gaggccttttatttcactgacagggttatgacagttagtttccacaagtatggagataag
ttctttcctggaactggtgatatgaaggatacaggggaaagagatggaagattctattcc
ataaatgtgcccctcaaggatggaatagatgatggcatcttcactagactcttcaaaaca
attattgcaaaggttgtggaaacatattcacctggtgcgatagttctgcaatgtggggca
gattcactagctggtgatcgtctgggctgcttcaacctctccattgatgggcatgctgaa
tgcgtaaggtttgtgaagaaatttaatttgccgttgctggtaactggaggtgggggatac
acaaaagagaacgttgcccgatgttgggcactggaaactggagttcttttagacacagaa
cttcccaatgaaattccagataatgattacatcaaatattttggccctgattattcattg
aagcttcctggcgggcacatagagaacttgaatagcaaatcatacattggcaccataaaa
atgcaagtaatggaaaatcttcgttgcatccagcatgctcctggtgtacaaatgcaagaa
gtaccacccgacttctatattcctgattttgatgaagatgagcaaaatccagacgagcgt
gtggatcagcacacccaagataagcatatccagcgtgacgatgaatattatgaaggcgac
catgacaatgataaccacatggatgatgcttaa
DBGET
integrated database retrieval system