KEGG   Nicotiana tomentosiformis: 104100471
Entry
104100471         CDS       T05025                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03082  ATP-dependent chromatin remodeling
nto03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104100471
   03083 Polycomb repressive complex
    104100471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nto03036]
    104100471
Enzymes [BR:nto01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104100471
Chromosome and associated proteins [BR:nto03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104100471
   HDAC complexes
    Sin3A-HDAC complex
     104100471
    BRAF-HDAC complex
     104100471
    REST complex
     104100471
    SHIP complex
     104100471
    MiDAC complex
     104100471
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104100471
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104100471
  Chromatin remodeling factors
   NuRD complex
    104100471
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104100471
NCBI-ProteinID: XP_009605994
LinkDB
Position
Unknown
AA seq 430 aa
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYGLHNKMEVYRPHKAYPVEL
AQFHSADYVEFLNRITPDTQHLFPSEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDMKDTGERDGRFYSINVPLKDGIDDGIFTRLFKT
IIAKVVETYSPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWALETGVLLDTELPNEIPDNDYIKYFGPDYSLKLPGGHIENLNSKSYIGTIK
MQVMENLRCIQHAPGVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKHIQRDDEYYEGD
HDNDNHMDDA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcggtccaaggacaaaatctcctacttctacgacggcgatgtcggaagcgtgtacttc
ggtccgaaccatccaatgaagccgcacaggttgtgtatgactcatcatctggttttagcc
tatggtcttcacaacaagatggaagtctataggcctcataaagcatacccagtggagcta
gcgcagtttcattcagctgattatgttgagttcttgaaccgaattacccctgatacccag
cacttgttccctagtgaaatggctagatataatcttggagaagattgccctgtatttgac
aacttattcgagttttgccaaatttatgctggcggaacaatagatgctgcacgcagattg
aataatcagctttgtgacattgctataaattgggctggtggattgcatcatgccaagaaa
tgtgctgcttcaggattttgctatataaatgacctagttctgggaatattggagctactg
aagtatcatgcgagggtgctgtatattgatattgatgtgcatcacggtgatggtgtagaa
gaggccttttatttcactgacagggttatgacagttagtttccacaagtatggagataag
ttctttcctggaactggtgatatgaaggatacaggggaaagagatggaagattctattcc
ataaatgtgcccctcaaggatggaatagatgatggcatcttcactagactcttcaaaaca
attattgcaaaggttgtggaaacatattcacctggtgcgatagttctgcaatgtggggca
gattcactagctggtgatcgtctgggctgcttcaacctctccattgatgggcatgctgaa
tgcgtaaggtttgtgaagaaatttaatttgccgttgctggtaactggaggtgggggatac
acaaaagagaacgttgcccgatgttgggcactggaaactggagttcttttagacacagaa
cttcccaatgaaattccagataatgattacatcaaatattttggccctgattattcattg
aagcttcctggcgggcacatagagaacttgaatagcaaatcatacattggcaccataaaa
atgcaagtaatggaaaatcttcgttgcatccagcatgctcctggtgtacaaatgcaagaa
gtaccacccgacttctatattcctgattttgatgaagatgagcaaaatccagacgagcgt
gtggatcagcacacccaagataagcatatccagcgtgacgatgaatattatgaaggcgac
catgacaatgataaccacatggatgatgcttaa

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