Nicotiana tomentosiformis: 104105477
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Entry
104105477 CDS
T05025
Name
(RefSeq) protein ROS1-like isoform X1
Organism
nto
Nicotiana tomentosiformis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
104105477
NCBI-ProteinID:
XP_009612084
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MDGRQGSSIPQTEDFQIANSWLPTTPAKPSLSPICGNRQQNQLAQDNGLELKRISQGQGL
SQVNQLELRSFLQEPEGRHVPACPGSTNSATVTEYFDTWEAAPGIKSKMYGDNNIKMYNN
FSSTDDVDKWSNVSFGHLLALAHAAGSTAAAENAETNFTMSGSFNPLVSSQDADGSSICS
RFPLNLNSPTDEVLRSNNAVHFEPITPDQIKNKGGRASDESNLDINETPLPSHMQSCEHT
LKRAQANDPQQKKEQSGLVLNVSELQESHKPDKADEQDAEQNNTPQQKRRRKKHRPKVVI
EGQPRRTPKPKKNQQHRSKETTGEKRKYVRRNKVEEPLCTPSDKVDGMTSPQSQLPSSRE
IQRAKRRYVRRNKVNKPAPNPAEDETIDPPNISRPRRSCRKSLNFDSESRLSDESSSHWP
SSTVEDLHENQSRSSVHLGKDIEVTTGKTELGTVYDIACSRGKCKIIFSDETHDKQASIS
EMTPKNLYDSNCSSSACLIQETPERALKRQHSFRTNEAELYSTNVKGAYFNSMQAYQAIL
PANEPYAHSTQGMHFPTIYKKKRTEKGHPTATPFTCETNYLSLSQCNIGLSQASTSANDK
ANNRMWNPELVPAFVEAEGLRRKRSKGISKVRDLASLLEICKHFPTPAKEASISEFGERY
SYQPNTCMEALVADTRAIMKTKKRSKRSILVSSTASYMYAQQQFTTNARGFLPAITWRSP
IEEIAECLQHLDLNRESIQDQYQYGEITYQNKFQAENALVIYRRDGSIVPFAGSFIRRRK
PRPKVDLDDETARVWKLLLQDINSEGIDGTDEDKAKWWEEERGVFHGRVDSFVARMRLVQ
GDRRFSPWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAAQFPLKSKAGTEKHEERTGIII
EEPEVSGLEADDTIGWHDDQSSQPTLGQNFLRISGAESNDEKTVVNSIESSENSTNCTSP
TENSISQQPGSSRESSCVHHESAMYGSATANAATSFSEDQIGPDDLLSSQNSVLSSQNSV
NFPVVQPLEGIESSNFSGSTSFLKLLQMAGTSKSHGVQDQNSENILPETDVHGQLHVACC
SHFQKDEENHKSSLENACPRSYLDSCLMPNVGAQGTKCKDDLEEAAKFPDLSRKLSATEQ
SKLSAESTNQELHEEMRSEAKISRNHHENKVDIATIDDPVANFELQIQIEESNYNMQRVA
EAPTFSEAIVDVREEVSVVVDSCKSEHIALKSNSNNKKHHADSTLDRANDNPKAKRKRPG
KEKQNVDWDSLRLQAQNNGKKRKRTANIMDSLDWEAVRCADVNEIAHTIRERGMNNMLAE
RIKDFLNRIFREHGSIDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVD
TNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYHMI
TFGKVFCTKSKPNCNACPLRGECRHFASAFASARLALPAPEEKSIVSATENKAAGQNPFQ
NFSQLSLPLPQADQTPLEHSKLINSAPIIEVPATPEPIVEEPASPEPEQKAPEVDIEDAY
FEDPNEIPTITLNMAEFTQNVRKFMENNMELQQVEMSKALVALTPEAASIPVPKLKHISR
LRTEHQVYELSDSHPLLEGFDKREPDDPCSYLLAIWTPGETADSIHPPAIKCNSQEAGRL
CDDETCFACNSLREAHSQTVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPID
VPRDWLWNLPRRTVYFGTSIPTIFKGLTTESIQHCFWRGFVCVRGFDKKTRAPRPLMARL
HFPASRLSKTKGKPDEN
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggacggaagacaaggaagctcaattccacaaacagaagattttcagattgccaattca
tggttaccaacaactccagcaaaaccaagtttgtcaccaatctgtgggaataggcaacaa
aatcaactagctcaagataatgggttggagttgaaaagaatttcacaaggacaaggtcta
agccaagtgaaccagttagaattgaggagtttcttgcaagaacctgaaggtcgacacgtg
cctgcatgtcctggttcgacaaattcagcaacagtaacagagtattttgacacttgggaa
gcagcaccaggcataaaatccaaaatgtatggagacaacaatattaaaatgtacaataac
ttctccagtactgatgatgtagacaaatggagcaatgtgtccttcggacatctcttggca
ctagcacatgctgctggatccacagccgccgctgaaaatgcagaaactaattttaccatg
agcggttctttcaatccccttgtcagttctcaggatgcagatggaagctctatttgctcg
agattccctttgaacctgaattcaccaacagatgaagtcttgagaagcaacaacgctgtc
cactttgaaccaataacaccagaccagatcaagaacaaagggggccgagcatctgatgag
tcaaatctagacattaacgagacaccgctaccaagccacatgcagtcatgtgaacataca
ttaaagagagcacaagcaaatgatcctcaacagaagaaagagcagtcagggctggtgttg
aacgtatcagaattgcaggagagtcacaagcctgacaaggcggacgaacaggatgctgaa
cagaataatacaccacagcagaaacgaagaaggaagaagcaccggcctaaagtggtaatt
gaaggccagcctagaaggactcctaaaccaaaaaaaaaccagcagcatcgttcaaaggaa
acaacaggagaaaagaggaaatatgtccgaaggaacaaggttgaggaacctctatgcaca
ccctcagacaaggtagacggtatgactagtccccagagccaacttcctagttccagagaa
atccaaagagcaaagaggaggtatgtcagaagaaataaagttaacaagcccgcaccaaat
cctgccgaagatgaaacaattgatccaccaaatatttctcgtccaagaagatcctgcagg
aaatcattgaattttgactcagaaagtagattaagtgatgaaagctcttcacactggccc
tcttcaactgtggaggacttgcatgagaatcaatcccgttctagtgtacatcttggaaag
gatattgaagtcacaacaggaaagacagaattgggcacagtttatgacatcgcatgttcc
agaggaaagtgtaaaatcattttctcagatgaaactcatgataaacaggcaagcatttca
gaaatgacaccaaagaatctgtatgattccaactgtagcagcagcgcatgcttgatccag
gaaacaccagaaagagccttgaaaagacaacattcttttagaactaatgaagcagaactt
tacagcacaaatgtcaagggagcctacttcaactccatgcaggcatatcaagcaatcctc
ccagcaaatgaaccttatgctcacagtacacaagggatgcattttcctacaatttacaag
aaaaagagaacagaaaagggccatcccacagcaacgccttttacatgtgaaactaactat
ctgtctttgtctcagtgcaacattggtctttcccaagccagtacgtctgcaaatgacaaa
gctaataatagaatgtggaatcccgaacttgtaccagcatttgtagaagcagaggggtta
agaagaaaaagatcaaaaggcataagtaaagtacgtgacttagcatcactgcttgaaatt
tgcaaacactttcctactcctgccaaagaagcatcgatatctgaatttggagaaagatat
tcatatcagcctaatacatgcatggaagccctagttgctgacacccgtgcaataatgaaa
acaaaaaagcggtcaaagagaagcatcctagtcagttccacagcatcctatatgtatgct
caacaacaattcacaacaaatgcaaggggtttcctaccagctataacatggagatcccca
attgaagaaattgcagaatgcttgcagcatcttgatttaaatagagaaagcatccaagat
caatatcaatatggggaaatcacctaccagaataagtttcaagcagaaaatgcccttgtt
atttatcgaagagatggaagtattgtcccttttgcaggatcattcattagaagacgaaaa
ccgcggcccaaggttgaccttgatgatgagaccgctagggtatggaagcttctgctgcaa
gatataaatagtgaaggcattgatggtacagatgaagataaggcaaaatggtgggaagaa
gaacgtggagtgtttcatggacgagtagactcatttgtcgcacggatgcgtcttgttcaa
ggagacaggcgattctctccttggaagggatctgttgtagactctgtagttggagttttc
ctgacacagaatgtctcagaccacctttctagctcggcattcatgtcgcttgctgctcaa
ttccctcttaagtcaaaagctggtactgaaaagcatgaagagagaacagggatcataatt
gaagaacctgaagtgagtggcctggaggctgatgatacaattggatggcatgatgatcaa
tcaagtcaaccaactcttggtcagaatttcttgagaatctctggtgcagaatcaaacgat
gaaaaaacagttgttaacagcattgaatcaagtgaaaatagcactaactgcactagtcca
actgaaaattccatatcgcagcaacctggttcttctagagaaagttcatgtgtgcatcat
gaatcagcaatgtatggatcggctacagctaatgcagcaacaagtttttcggaggatcaa
ataggaccagacgatttgctctcttctcagaattctgtactttcttctcaaaattctgtt
aactttccggttgttcaacctttggaaggaattgaatcaagcaacttttctggctccaca
tcatttttgaagttactacagatggcaggaacttcgaaatcacatggagtccaggatcag
aacagtgaaaacatcttaccagaaacagatgtacatggccaactacatgtggcatgttgt
tcacacttccagaaggatgaggagaatcacaaaagctcactagaaaatgcttgtcctcgt
agctatttggactcatgtctgatgcctaatgtaggagcacaaggaaccaagtgcaaagac
gacttggaagaagctgcaaaatttccagatctctcaaggaaactcagtgcaactgaacaa
agtaaattatcagcagaatctacaaatcaagaactgcatgaagagatgaggagtgaggct
aaaatctcacgcaatcaccatgaaaacaaggtggatatagcaacaattgatgatccagta
gccaactttgagctacaaatccaaattgaagagagcaactacaatatgcagcgagtagca
gaagcaccaacattttcagaagccattgtagatgtcagagaggaggtcagtgtagttgtc
gattcatgcaagtctgagcacatagctttgaagtcgaactcaaacaacaaaaaacatcat
gctgatagcacattagacagagcaaatgacaatcctaaagcaaaaaggaaacggcctgga
aaagagaaacagaatgttgactgggacagtttaaggttacaggctcagaacaatggtaag
aaaagaaaaaggacagcaaacataatggattcactggactgggaagcagtgaggtgtgca
gatgtcaatgagatagcccataccatcagagaacggggaatgaacaatatgctagcagag
agaatcaaggatttccttaatcggatttttagagaacatggaagtattgatcttgaatgg
ctgagagacgttccaccagacaaagcaaaagagtatctattaagcatcaggggcttgggc
ctgaagagcgtagagtgtgtgcgacttttaacacttcaccaccttgctttccctgtcgac
acaaacgttggccgtatagccgttagactgggatgggtgcccctgcagccattgccggaa
tcgctacagttgcatcttctggaattgtacccagtgctggagtcaattcaaaagtacctc
tggccacgtctctgcaagctcgatcagagaacattatatgagttgcattaccatatgatc
acttttggaaaggtcttctgtacaaaaagcaaacccaactgcaatgcatgtccattgaga
ggagaatgtagacacttcgcaagtgcttttgcaagcgcaaggcttgcccttccagcacca
gaagagaaaagcattgtgagtgcaacagaaaacaaagcagctggccagaatccattccag
aacttcagccaactgtcgctgcccttacctcaggctgatcaaacaccattagagcattcc
aaattgatcaactccgcacctattattgaagtgccagcaacaccagagcccattgtagaa
gagcctgcctcgcctgagccagagcaaaaagctcccgaagttgacattgaagatgcttac
tttgaagatcctaatgaaattcctacaattacattgaatatggcagagttcactcaaaat
gtgaggaaatttatggaaaacaatatggagcttcaacaggtagaaatgtcaaaagccttg
gtcgctttaactccagaagctgcatcgattcccgtgcctaaacttaagcatataagccgg
ctcagaactgaacatcaagtatatgaactttcggattctcatcctctcctagaagggttc
gacaaaagagaaccagatgatccatgctcctatcttctggcaatatggacacctggtgaa
acagcggattctattcatccacctgcaataaagtgcaactcccaagaggctggtaggcta
tgtgatgatgaaacatgctttgcatgcaacagcctacgtgaagcacattctcaaacagtg
agagggacaattctgataccatgtcgaacggcaatgagaggaagctttccgctcaatggt
acatactttcaagttaacgaggtgtttgcagaccatgactccagcctcaacccaattgac
gtcccacgagattggctatggaatctgccgcgacgaacagtttactttggaacctcaata
ccaacaatatttaaaggcctaaccacagaaagtatccaacattgcttttggagagggttt
gtttgtgtgaggggttttgacaagaagacacgggcaccaagaccactgatggcacggttg
cattttccagccagcagattgagtaagactaaaggaaagccagatgaaaactag
DBGET
integrated database retrieval system
