Nicotiana tomentosiformis: 104109741
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Entry
104109741 CDS
T05025
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104109741
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nto01007
]
104109741
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nto03016
]
104109741
Enzymes [BR:
nto01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
104109741
Amino acid related enzymes [BR:
nto01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104109741
Transfer RNA biogenesis [BR:
nto03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104109741
Prokaryotic type
Other AARSs
104109741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
104109741
NCBI-ProteinID:
XP_009617388
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MEDVCEGKDFSFPNQEEKILQWWDSVKAFETQLEKTKNQPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDEKLEIKTKQQVLDMGIDTYNEA
CRAVVTRYVGEWEKTVVRMGRWIDFKNGYKTMDLKFMESVWWVFAQLFQKGLVYRGFKVM
PYSTGLKTPLSNFEANSNYKEVSDPEIMVSFPIVDDPEGASFVAWTTTPWTLPSNLALCV
NANIVYVKVRNKFNGKIYVVAESRLAELPVEKAKKVTPNEPAADTQNPNPKSKPSGGKSQ
NVETYEVVDKFSGSSLVGKKYIPLFDYFKDFSDTAFIVVADDYVTSDSGTGIVHCAPAFG
EDDYRVCIGNHIIKKGESLIVAVDENGYFTDRITDFRGKYVKEADNDITQAVKEKGRLVK
SGKFMHSYPFCWRSDTPLIYRAVPSWFIMVEKIKDQLLENNKQTYWVPDFVKEKRFHNWL
ENARDWAVSRSRFWGTPLPVWISEDGEEIVVMDSIDKLEKLSGAKVTDLHRHNIDHITIP
SSRGPEYGVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFENNFPGHFVAEGLDQTRGW
FYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPQPSEVINDYGADALRLYL
INSPVVRAEPLRFKKDGVFAVVKDVFLPWYNAYRFLVQNAKRLEIDGFGPFIPTDQKTLQ
SSSNVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRT
GEGDCRTALSTLYYVLLTSCKVMAPLTPFFTEVLYQNLRKVCKGSEESIHYCSYPEVEGT
RWERIEQSVNRMMTIIDLARNIRDRHNKPLKTPLREMVVVHPDSEFLDDIAGKLREYVLE
ELNIKSLVPCNDTLKYASLRAEPDFSVLGKRLGKSMGVVSKEVKAMSTEDIIAFEKAGEI
TVASHTLKLSDIKIVRGFKRPDNRKENEMDAAGDGDVLVILDLRTDDSLFEAGVAREVVN
RIQKLRKKAALEPTDLVEVFFKSLDEDKTVSQQILESQESYIREALGSPLLPADPIPSHA
MTIGEESFHGISSLSFVITLARPSLVFDSDAITALYGGNTQFSQGLKTYLLMRDHHNLKS
EFQQGKGKITVKCIENQPPVEVVLGKHVFLSVGDYFLNRKLQ
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtctgcgaaggcaaagatttcagctttccaaatcaagaagagaaaattctc
caatggtgggattcagtaaaagcattcgaaacccagctcgaaaaaaccaaaaatcaaccc
gaatacatcttctacgacggtccgccatttgcgacgggtttgccgcattacgggcatatt
ttagcgggtacaattaaggacattgtgacccggtaccaatccatgacgggtcatcatgtg
acccgaagattcggttgggattgtcatggattaccagttgaacatgagattgatgagaaa
cttgagattaagactaaacaacaagtgcttgacatggggattgatacatataacgaggca
tgtagagctgttgttacgaggtatgttggggaatgggaaaagacagtggtgagaatgggg
aggtggattgattttaagaatgggtataagactatggatttgaagttcatggaaagtgtt
tggtgggtttttgctcagttgtttcaaaagggtcttgtttatagaggtttcaaggttatg
ccttatagtactggtttgaagactccattatccaattttgaagctaattctaattataag
gaagtaagtgaccctgaaatcatggtttccttcccgatagttgatgatcccgagggtgcg
tcctttgttgcgtggacaacaactccttggacccttcctagtaatcttgctctttgtgtc
aacgccaatattgtatatgtcaaggttcgcaataaattcaatgggaagatttatgtggtg
gcagaatctcgattggccgagctaccagttgagaaggcgaaaaaggtcaccccaaatgaa
cctgctgctgacactcaaaatccaaatcctaagtcaaagccttctggtggtaaatcacag
aatgtcgaaacttacgaggtggtggataaattctccgggtcgtcccttgtggggaagaag
tatattccactatttgattacttcaaggatttttctgacacagcattcatagtcgttgcg
gatgattatgtgacttctgacagtggtactggaattgttcattgtgctcccgcctttggt
gaggacgattatcgtgtttgtattggaaatcacataataaaaaagggggagagcctgatt
gtggcggtagatgaaaatggctactttactgatagaattacggacttcagaggaaaatat
gttaaggaggcagataatgatatcactcaagcagtgaaggagaaaggaaggcttgtcaaa
tctggaaagtttatgcattcataccctttttgctggagatctgacacacctctgatttac
agagcagttcctagctggtttattatggtggaaaagattaaggatcaattgctagagaac
aataaacaaacctactgggttcctgattttgtgaaggaaaaacgcttccacaattggtta
gaaaatgcaagagactgggctgttagccgaagtaggttctggggtactcctcttcctgtg
tggattagtgaggatggtgaggagattgttgttatggactccattgacaaactggaaaag
ctttctggtgctaaggtgacagacttgcatcgtcacaacattgatcacattacaattccg
tccagccgggggcctgaatacggcgttcttcgacgcgtggaggatgtatttgattgctgg
tttgagagtgggtcaatgccttatgcttatatccactatccttttgagaatgttgaactt
ttcgagaacaatttcccaggtcattttgtggcagaaggtcttgatcaaactcgtggatgg
ttctacacccttatggtcctttctactgcccttttcgggaaacctgcttttagaaacctc
atttgcaatggtcttgtcctggctgaggatgggaagaagatgagtaaacgattaaaaaac
tatcctcaaccatcagaagttatcaatgattatggagctgatgcattacgtttatacctg
ataaactctcccgtcgtccgtgctgaacctctgcgttttaagaaagacggagtttttgct
gtggtgaaagatgttttcttgccatggtacaatgcatataggttccttgttcagaatgca
aaaagacttgaaattgatgggtttggaccattcattcccactgatcagaaaactttgcag
agttcatccaatgtcctagatcaatggatcaattctgcaactcagagcttagtgcatttc
gtccggcaggaaatggatgcttatagattgtacacggtggttccgtatctcctaaaattt
cttgataatttaacgaatatctatgtgcggttcaatcggaagaggctaaaaggccgtact
ggtgagggggactgcagaactgctctttcaactctgtactatgtgcttctgacttcatgt
aaagtaatggcaccgttaactccttttttcactgaggttctttaccaaaacttgcggaaa
gtttgcaaaggatcagaggagagcattcactattgcagctatcctgaagtggaaggaacg
aggtgggagcgtattgagcagagtgttaataggatgatgacaattattgaccttgcacgc
aatattcgtgatcgtcacaataagcctcttaaaactccgctcagggaaatggtggttgta
catccagattcagaattccttgatgatattgcgggcaaacttagagagtatgtgctagag
gagctaaacattaagtctttggtcccatgcaatgacacgttgaagtatgcttctttgcgt
gcagagccagatttcagtgtgttaggaaaaaggctgggaaagtcgatgggagttgtttcc
aaggaagttaaggccatgtcaacagaagatattattgcttttgagaaagcaggagaaatt
actgtcgcttcgcacactttgaagcttagtgatatcaagattgttcggggtttcaaacgt
cctgataataggaaagagaatgaaatggatgcggcaggggatggtgatgttttagtgata
ctggatttgcgtactgatgattcactgtttgaggctggagttgctcgggaggttgtgaat
aggatacagaaactgagaaagaaagccgcgcttgaacccactgacttggtagaggtcttc
ttcaagtctttggatgaggataaaacagtctctcagcagattttggagtcccaggaatca
tatattagagaagcccttggatctcctttgcttcctgctgacccgatcccttcacatgca
atgacaattggtgaagagagtttccatggaatatcaagcttgtcctttgtgattacgtta
gcaagacccagtctagtttttgattcagatgccatcactgctttatatggaggaaacaca
cagttttctcaaggcttaaaaacttacctgctgatgagggatcaccataacttgaagtcg
gagtttcaacaaggaaagggcaagataacagtaaagtgcattgagaatcagcctccagtt
gaggtggttctgggaaagcatgtcttcttgagtgttggagattatttcttgaacaggaaa
ttacagtaa
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