Nicotiana tomentosiformis: 104112736
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Entry
104112736 CDS
T05025
Name
(RefSeq) WD repeat-containing protein 3-like isoform X1
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104112736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104112736
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104112736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Utp12
NBCH_WD40
WDR54
Ge1_WD40
Nup160
PALB2_WD40
eIF2A
PROPPIN
Rhamnogal_lyase
Motif
Other DBs
NCBI-GeneID:
104112736
NCBI-ProteinID:
XP_009621040
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MVKGYHRYEPAVSFGVISSGVIAYDSSGKHLLAAALEKIGVWHVRQGVCTKTLAPSSNLK
KGPSLAVTSIASSSSSSHIASGYAEGSIRIWDSEKGICETTLNGHKGAVTALRYSKLGSL
LASGSKDNDVILWDVVGETGLFRLRGHRDQVTDLVFLDSGKKLATASKDKFLRVWDLDTQ
HCMQIISGHHTEIWSIDIDPEERYLVTGSADPELRFYTIKRDFADGQLIAKKSETNVNKD
LPTDNKWEVLKSFGEIQRQSKDRVATVRFNKCGNLLACQVAGKMVEIFRVLDESESKRKA
KRRVSRKKQKKAAKEGLEATDKGEADIGGSNPVVTVLDIFKLHQTLRAGKKISSISFSPV
TSKNSLATLALSLNNNLLEFHAIESSSTTELSAIELQGHRAVVTSVTLSSDNALLMSTSH
SGIKIWNPTTGSCLHTIDSGYGLCGLFVPGNKYAVVGTKGGTLEFIDVRSATCVEVVEAH
GGAVQSIALTSDGTGFLTSSADQDIKFWEFQMVQKAGEIQGSKHLTASPTRSLKLHDDVQ
VVAASPDGKFIAAALLDNMVKVYYMDSLKLFLSLYGHNLPVLCMDISSDGDLLVSGSADK
NVKIWGLDFGDCHKSLFAHADSVTGVKFVRKTHYFFTAGRDRLVKYWDADKFELLLTLEG
HHAEVCCLAMSNLGDFIVTGSHDRSIRRWDRTEQLFFLEEEKEKRLEEMFESDIDNGFEN
KYGLKEELPEEGAVALAGKKTQETLTATDSIIEALDMADAELKRIAQHEEDKSKGRVSEF
RPNILMLGLSPSDYLLRTLSSVHTNDLEQAFQPLPFSYALKLMSYLENWASIPDKLELVI
RVATLLLQLYHHQLVSTLSARPLLTKLKDIRARVKERKDILGVNLAAMDHHRAQLMYSRS
DAPFGNAKTKLWEIHTKGIEAREDTKQEKKRKKKQKKVDGGHVWS
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagggttaccacaggtacgagccggcggtctcgtttggagttatatcatcggga
gttatagcctatgacagctcaggcaaacacctgctagctgcggcgttagagaaaatcggt
gtatggcatgtgaggcaaggtgtttgtaccaaaaccctagctccgtcatctaacttaaaa
aaaggaccttcccttgccgttacatcaattgcttcctcttcttcatcatcccatatagca
agtggttatgctgaaggaagcattagaatctgggattccgagaaagggatatgtgaaaca
acactgaatgggcataaaggggctgtgacggccctacgatacagtaagcttggatcatta
ctagcatctggaagcaaagataatgacgttattttatgggatgtggtgggtgagactggc
ctgtttcgccttcggggacatcgtgatcaggttactgatcttgttttcttagattctggc
aaaaaactggcaacagcttctaaggacaaatttttaagggtatgggatcttgatactcaa
cattgcatgcagattataagtggccatcatactgaaatttggtccatagatattgaccct
gaggaaagatatctagtcactggttctgctgaccccgagcttcgcttttacactataaag
cgtgattttgctgatggacaattgatagctaaaaaaagcgaaacaaatgtaaataaggac
ttgcctactgataacaaatgggaagtactcaagtcatttggtgaaattcaacgccaaagc
aaggatagagttgcaacagtgaggtttaacaagtgtggaaacctgttggcttgtcaagtt
gcagggaagatggtggaaatattccgtgtgctggacgagtctgaatctaaacgcaaagcg
aaaagaagagtcagtagaaagaagcagaagaaagctgccaaagaaggccttgaggcaacg
gataaaggagaggcagatattggaggcagcaatcctgttgttacagttctggatatcttc
aagcttcatcagactctacgggctggaaagaagatctcctcaatttctttctccccagtt
acttcaaagaattcactggctaccttagcattgtcgttgaacaataatttattggaattt
catgctatagaaagcagttcaactactgaattgagcgctattgagcttcaggggcatcgt
gctgttgtcacaagtgttactctcagctcagataacgctcttttgatgtcgactagtcac
agtggaattaaaatatggaaccctactactggttcttgcctccacacaattgattcagga
tatggtctctgtggactatttgttccaggtaacaagtatgcggttgttggtacaaaaggt
gggaccctggaatttattgacgttaggagcgctacttgtgtggaagtagtggaagcccat
ggcggtgctgttcagtcaattgctttaacttcagatggaacaggttttctcaccagcagt
gccgatcaggacattaaattctgggaatttcaaatggtgcaaaaggctggtgaaatacag
gggtctaagcatttaactgcatctcccacaaggagcttaaaactgcatgatgatgttcaa
gtggttgctgcgagccctgatggtaaatttattgctgctgccttgttggataacatggta
aaggtctactatatggattcactcaagttatttctttcactctacggtcacaacctgcct
gtattgtgtatggatatttcttcagatggggatctgcttgtcagtgggtctgcggacaaa
aatgtgaagatttggggtctagacttcggggattgtcataagtcactttttgcgcatgct
gatagcgttacgggagttaagtttgtgcgcaaaacccattacttttttactgcggggaga
gatcgcttggtgaagtactgggatgctgacaagtttgagttgcttttaacccttgaaggt
caccatgctgaagtttgctgtcttgctatgagcaaccttggtgattttattgtcacagga
tctcatgatcggtccatacgccgttgggatcgtactgaacaactattttttcttgaggaa
gagaaagagaagagattggaagagatgtttgaatcagacattgacaatggatttgagaat
aagtacggactaaaggaagaacttccagaggagggagctgtggcattagcggggaaaaag
actcaagaaactcttactgctacagattctatcattgaagcactggacatggcagatgcg
gaactgaagcgaattgctcaacatgaggaggataaatcaaagggcagagtttcagaattc
aggccgaatattctcatgcttgggctttctccgtctgattatcttcttcgtacattatct
agtgttcatactaatgatctggagcaagctttccagcctttacccttttcttatgctttg
aagctcatgtcatacctggagaattgggcctctataccagataagctggagcttgttatt
agggtagcaacactgttattgcaactttatcatcaccaactggtttcaactctctctgct
agacccctcttgaccaaactaaaagacattcgtgcaagagttaaggaacgcaaagatatc
ctcggtgtcaacttagctgcaatggatcatcatcgcgcgcaattgatgtattcacggtcg
gatgctccatttggaaatgcaaagactaaattatgggaaatacacacaaaaggtattgaa
gcaagggaagacacaaaacaagaaaagaagagaaagaagaaacagaagaaggttgacgga
ggacatgtttggtcataa
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