Nocardia terpenica: CRH09_04330 Help Entry CRH09_04330       CDS       T05168                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism ntp  Nocardia terpenica Pathway ntp03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:ntp00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     CRH09_04330  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ntp03400]     CRH09_04330 Enzymes [BR:ntp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CRH09_04330 DNA repair and recombination proteins [BR:ntp03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      CRH09_04330 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S Motif Other DBs NCBI-ProteinID:  ATL65549 UniProt:  A0A291RE15 LinkDB All DBs Position 917736..920027 Genome browser AA seq 763 aa AA seqDB search MVSRRDFGGIEVELNNLDKVLYPATGTTKGQVIDYFTEVAPALLPHIAGRAVTRKRWPNG VEEPSFFEKNLAAHAPRWIHRHTVAHSDRHVVYPVIDSVAGLAWLGQQAALEIHVPQWRF ADGERGPITRLVFDLDPGPDVELAQCARVALSIRDTVRDVGLEAYPVTSGSKGIHVYVPL DRVLSAKGASTVAKQVATGLEKLHPDLVTATMAKRARPGKVFVDWSQNNPSKTTIAPYSL RGRTHPTVAAPRTWAEIEDRKRLRQLTFDEVLARWRDRGDVIAGLDPPLPQRDSDRLDTY RARRDPARTPEPVPSGPPEGTGDRSSPLAEAAGDRFVIQEHHARRLHWDLRLERGGVLVS WAVPKGPPTSRDENRLAVHTEDHPLEYLDFHGTIPKGEYGGGTMTIWDSGTYETEKWRED EVIVRLHGHRLDGRYALIRTEGKQWLMHLMKSEPRQEVSIPGNGKSRQPTEMPRGLTPML ATPGDVSNLDADEWAFETKWDGFRLIAEIDSGAVVLRSRAGNVVTGRYPRLAALGTELAG HSAVLDGEAVVFDDHGAANLGLLQHDAARAVFVAFDVLYLDGTSLLRKRYSDRRRVLEAL AGRAPSLVVPPRIDGSGADALRYSQEHAMEGVIAKRKDSVYLPGRRGQSWLKTRNWRTQQ VVVGGWRRSDVRQFASLLIGVPHEGRLYYVGRVGTGFSEQEMTDLTTRLHRLDRKTSPFA NDLTPDERKGAVWVTPKINGTVRYMNWTEGGRMWHPAWIPASD NT seq 2292 nt NT seq  +upstreamnt  +downstreamnt atggtgtcgcgccgcgacttcgggggcatcgaggttgagctgaacaacctcgacaaggtg ctgtacccggccacgggcaccaccaaaggccaggtcatcgactatttcaccgaggtcgcg cccgccctgctgccgcatatcgccgggcgcgcggtcacccgcaagcgctggccgaacggt gtcgaggagccctcgttcttcgagaagaatctggccgcgcacgcccctcggtggatccac cgccacaccgtcgcgcattccgaccgccacgtggtgtacccggtcatcgattcggtcgcg ggcctggcctggctggggcagcaggcggcgctggaaatccatgtgccgcaatggcgtttc gccgacggcgagcgcgggccgatcacccgcctggtcttcgatctcgaccccggccccgat gtcgaactggcgcagtgcgcccgggtggccctgtccattcgcgacaccgtgcgcgatgtc gggttggaggcgtatccggtcaccagcggcagcaagggaattcacgtctacgtcccgctg gatcgggtgctgagcgcgaagggcgcgtccaccgtcgccaaacaggttgccaccggcctg gagaagctgcaccccgacctggtcaccgcgaccatggcgaagcgggcccgcccgggcaag gtcttcgtcgactggagccagaacaacccgtccaagaccaccatcgcgccgtattcgctg cgcggccgcacccacccgacggtggcggccccgcgcacctgggccgagatcgaggaccgc aaacgcctgcgccagctcaccttcgacgaggtgctggcccgctggcgcgaccgcggcgat gtcatcgccgggctcgatccgccgctgccgcagcgagattcggaccgactcgacacctat cgcgcccggcgcgacccggctcgcacccccgaaccggttccgtccggtccgcccgagggc acgggagacaggtccagcccgctcgccgaggccgcgggggacaggttcgtcatccaggag catcacgcccgtcgcctgcactgggatctgcggctcgagcgcggcggcgtgctggtgtcc tgggcggtgccgaagggcccgcccacctcccgcgacgagaatcgcctggccgtgcacacc gaggaccatccgctggagtacctcgacttccacggcaccatccccaagggcgaatacggc ggtgggaccatgaccatctgggactccggcacctacgagaccgagaagtggcgcgaggac gaggtcatcgtccgcctgcacggccatcgcctggacgggcgctacgcgctgatccggacc gagggcaagcagtggctcatgcacctgatgaaatccgagccccgccaggaggtgtcgata ccgggcaacggaaagtcgcggcagcccaccgaaatgccgcgcgggctcacccccatgctc gccacccccggcgacgtctcgaatctcgacgccgacgaatgggccttcgagaccaagtgg gacgggttccgcctgatcgccgagatcgattccggcgcggtcgttttgcgcagccgcgcc gggaacgtggtcaccggccgctatccgcgcctggccgcgctgggtaccgaattggccggg cacagcgccgttctcgacggcgaggcggtggtgttcgacgatcacggtgccgcgaatctc ggtctgctgcaacacgatgcggcgcgggcggtgttcgtcgccttcgacgtgctctatctg gacggcacttcgctactgcgcaaacgatattcggatcggcggcgggtgctcgaggcgctg gccgggcgcgcgccctcgctggtggtcccgccccgcatcgacgggtcgggcgccgacgcg ctgcgctacagccaggagcacgccatggagggggtgatcgccaagcgcaaggattcggtg tatctgccgggccgccgcggccaatcctggctcaagacccgcaactggcgcacccagcag gtggtggtcggcggctggcggcgcagcgatgtgcggcagttcgcctcgctgctcatcggc gtgccgcacgaggggcggctgtactacgtgggccgggtcggcacgggcttcagcgaacag gagatgaccgacctgaccacccgcctgcaccgcctggaccgcaagaccagcccgttcgcc aacgacctcacccccgacgaacgcaagggcgctgtctgggtgacccccaagatcaacggc acggtgcgctacatgaactggaccgaagggggccgaatgtggcacccggcctggatcccc gcctcggactga

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