Nitrosopumilus ureiphilus: C5F50_08595
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Entry
C5F50_08595 CDS
T06690
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nue
Nitrosopumilus ureiphilus
Pathway
nue03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C5F50_08595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nue03400
]
C5F50_08595
DNA repair and recombination proteins [BR:
nue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C5F50_08595
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C5F50_08595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
Met_synt_B12
AAA_30
HEM4
UB2H
Motif
Other DBs
NCBI-ProteinID:
QLH07993
UniProt:
A0A7D5M6X4
LinkDB
All DBs
Position
complement(1490925..1492877)
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AA seq
650 aa
AA seq
DB search
MEQTSRFELVSDYSPTGDQPQAIGILVDGVKKKSVQTLLGVTGSGKTFSIANVIAITGKN
TLVISHNKTLAAQLYSELKQFFPKNNVGYFVSYYDYYQPESYLPQTDTYIEKDTQINEKI
EKLRLEATAMLLSGEPTIIVSTVSCIYSLGNPKDWEDLAITLKTGEEIKRTEIIRKFIDA
RYERNDTEVAPGNFRVKGDTIDVTPAYSEDLVRISLFGDEIEKIALLDHVSLQEKKKVSQ
MKIFPAKHYLIAKDVRQKAVNSIKKELQKRLPELNELEKQRLEMRTKYDLEMIEELGYCS
GIENYSRHFDGRSSGEKAFCLMDFFGDDYLLVIDESHVTLPQLHGMYKGDHSRKKELVTY
GFRLPSAYDNRPLKFEEFEEYIKNTIFVSATPSDYEKKISSKIVEQLVRPTGLLDPIVEI
RPTRGQMDDLINEINKRAAKSERVLVTTLTKRMAEDLAEYLSKKQVRVRYMHSEIEGLQR
TELIRQLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNFTSLIQTCGRAARN
ENGTVIMYADNNTQSMINTMNETKRRREKQIQYNLKHNITPKTIIKSVPEQETTLDESKL
KSTHDLNNDIIDLEAQMKKYSEELDFERAIECRDRIKRLEKEIQFKDGRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
ttggagcaaacatctagatttgaattggtgtctgactattctcctacaggggatcagcct
caagcaattggtattctagttgacggtgtaaagaaaaaatccgttcaaacattacttgga
gttacaggaagtggaaagacattctctattgcaaatgtaattgcaataacaggaaagaac
acccttgtaatttctcataacaaaactttggctgctcaactttattcggaactcaagcag
ttctttccaaaaaacaacgtgggttattttgtttcatattatgattattaccagccagaa
agttatcttcctcaaactgatacctatattgaaaaagatactcaaattaatgaaaaaatt
gaaaaattaagactagaagcaactgcaatgcttctatcaggagagcctaccataattgtc
tctactgtttcatgtatttactctctgggaaatccaaaggactgggaggacttggcaata
acattgaagactggagaagaaattaaacgaacagagataattagaaaattcattgatgca
agatatgaaagaaatgatactgaagtagcaccaggaaactttagagtaaaaggtgacacc
attgatgtaactcctgcatattctgaagacctagtgagaatttctctgtttggtgatgaa
atagaaaaaattgcattacttgatcatgtttctttacaagaaaaaaagaaagtatctcaa
atgaagattttccctgcaaaacactatcttattgcaaaagatgtccgtcaaaaagctgtt
aattcaattaaaaaagaattgcaaaaacgattgccggaattaaatgaattagaaaaacaa
aggcttgaaatgcgaacaaaatatgatttggaaatgattgaggaattaggatattgttct
ggaattgaaaattattctcgacattttgatggaagatcatctggggaaaaagcattctgt
ttgatggatttttttggagatgattatcttttggtaattgatgaatctcatgtaacattg
cctcaacttcatgggatgtacaaaggggatcactcaagaaaaaaagaacttgtaacttat
ggatttagactgccaagtgcatatgacaataggcccctaaaatttgaggagtttgaagaa
tacatcaaaaacacaatatttgtctctgcaactccatctgattacgagaaaaaaatctca
tcgaaaatcgtcgagcagcttgtaagacctactggtctacttgatccaatagtggaaatt
aggcccaccaggggccaaatggatgatttgattaatgaaatcaacaaaagggcagccaaa
tctgagcgtgttttggtgactactcttactaaaagaatggcagaagatttggcagaatat
ctctccaaaaaacaagtccgggtcagatacatgcattcagaaattgaagggttgcaaaga
actgaattaatcaggcagttacgccttggagaatttgatgttcttgttggaatcaatctg
cttcgagagggattggatattcctgaagtatcactagtagcaattttagatgcagataaa
gaaggattcttaagaaactttaccagtctaattcagacctgtggtcgtgcagcaagaaat
gaaaatgggactgtgataatgtatgctgataacaatacacaatctatgataaatacaatg
aatgaaacaaaacgtcgaagagaaaaacaaattcaatataatcttaaacacaatatcacg
cctaaaactatcataaaatcagtaccagaacaagaaactaccttagatgaatctaaatta
aaatccacacatgatctaaataacgacattattgatttggaagctcaaatgaaaaaatat
tctgaagaattggactttgagcgtgcaattgaatgcagagatagaataaaaagactagaa
aaggagattcaattcaaagatggcagaaaataa
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