Nonlabens ulvanivorans: R1T42_12010
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Entry
R1T42_12010 CDS
T09493
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul00521
Streptomycin biosynthesis
nul00523
Polyketide sugar unit biosynthesis
nul00541
O-Antigen nucleotide sugar biosynthesis
nul01100
Metabolic pathways
nul01110
Biosynthesis of secondary metabolites
nul01250
Biosynthesis of nucleotide sugars
Module
nul_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
R1T42_12010 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R1T42_12010 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R1T42_12010 (rfbC)
Enzymes [BR:
nul01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
R1T42_12010 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WOI22387
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Position
2648585..2649121
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AA seq
178 aa
AA seq
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MIVKETPLKDCYIIEPPVFGDDRGYFSIRHDKYAFAKAFPNHPPFVLHNESFSSYGVLRG
LHLQKGDAAQAKLVRCVQGKILDVAVDYRPDSPTFLKHFTIELSGDNHKQLLVPRGFLHG
FSVLSDTAIVNYQVDNTYQPETEFGIRYDDPTLNIDWQLPDSAVLLSEKDEKLDFLKL
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaaaagaaactccgttgaaagactgctacatcatcgagccacctgtttttggt
gatgatcgcggttatttcagtattagacatgataaatacgctttcgcgaaagcgtttcct
aatcacccaccatttgtattacataacgagtctttttcaagctatggagtgctgcgtggt
ttacatctacaaaaaggagatgctgcgcaagcaaagctagtgcgttgtgtacaaggtaaa
attcttgatgtagcagtagattacagaccagattctccaacctttttaaaacatttcacc
attgaattaagtggtgataatcataaacaactcttagttcctagaggattcctgcatggc
ttttctgtcctgtcagatacagcaatcgtaaattatcaagtagataacacttaccaacca
gagactgaatttgggatacgatatgacgacccaacgttaaatatagattggcaattacca
gatagtgctgttttactatctgaaaaagatgaaaaattagattttttaaaattataa
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