Nonlabens ulvanivorans: R1T42_12240
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Entry
R1T42_12240 CDS
T09493
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
nul
Nonlabens ulvanivorans
Pathway
nul00860
Porphyrin metabolism
nul01100
Metabolic pathways
nul01110
Biosynthesis of secondary metabolites
nul01120
Microbial metabolism in diverse environments
nul01240
Biosynthesis of cofactors
Module
nul_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
R1T42_12240 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nul04147
]
R1T42_12240 (hemB)
Enzymes [BR:
nul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
R1T42_12240 (hemB)
Exosome [BR:
nul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
R1T42_12240 (hemB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF5685
Motif
Other DBs
NCBI-ProteinID:
WOI22432
LinkDB
All DBs
Position
complement(2706508..2707482)
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AA seq
324 aa
AA seq
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MYPLRRNRRLRTNNAIRSMVQETIISPNDFIVPLFIVEGTGIKEEIASMPDYYRYSLDLL
KDEVKTLWSMGLKSVLLFVKVPDNLKDNKGTEAINANGLMQRAIKTVKDVAPDMYVMTDV
ALDPFSSYGHDGIVENGEILNDETAEVLAQMSVSHAQAGADMVAPSDMMDGRILYIREAL
EEEGFKNTGIMSYSAKYASAFYGPFRDALDSAPGFGDKKTYQMDPANRSEAIRETLMDID
EGADIVMVKPGLCYLDIVRDLKNEVEAPISVYQVSGEYAMLKAAAEKGWLNHDAVMMEQV
TAIKRAGADLIASYFAKDVVKLLG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtacccattaagacgtaatagaagattaagaacaaacaacgctataagatcaatggtt
caagagaccataatatcacctaatgattttatcgttcctctgtttatagtagaaggaact
ggtataaaggaagaaatcgcctctatgccagattactatcgttatagtctagatttactt
aaggatgaagtaaaaacgctatggtctatgggattgaaaagtgtgttgctttttgtaaaa
gttcccgacaatctaaaagacaataaaggaactgaagctattaatgcaaacggtttaatg
caacgtgctattaaaactgtcaaagatgtagcgccagatatgtatgttatgacagatgtt
gcattggatcctttttcaagttatggccatgatggtatagtagaaaacggtgagattcta
aatgatgaaactgctgaagtgctggctcaaatgagcgtctcacatgcacaggctggagca
gatatggtggcgcctagcgatatgatggatggacgtattctttatatacgtgaagctcta
gaagaagaaggttttaaaaataccggaatcatgagttatagcgcaaagtatgctagtgca
ttttatggaccttttagagatgcactggatagcgcgcctggttttggagataaaaaaacc
tatcagatggatcctgcaaaccgtagtgaagccataagagaaacactcatggatatcgat
gaaggagcagacatagttatggtaaaaccaggattgtgttatctagatatcgtgcgtgat
ttaaaaaacgaagttgaagctcctattagcgtttatcaagtgagtggtgagtatgcgatg
cttaaagctgcggcagaaaaaggctggttgaaccacgacgccgtgatgatggaacaagtc
actgccattaaaagagctggagctgatcttatagcgagttattttgctaaagatgtagtt
aaattactaggttaa
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