Nitrosomonas ureae: ATY38_13390
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Entry
ATY38_13390 CDS
T04188
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nur
Nitrosomonas ureae
Pathway
nur03030
DNA replication
nur03430
Mismatch repair
nur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATY38_13390 (dnaE)
03430 Mismatch repair
ATY38_13390 (dnaE)
03440 Homologous recombination
ATY38_13390 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nur03032
]
ATY38_13390 (dnaE)
03400 DNA repair and recombination proteins [BR:
nur03400
]
ATY38_13390 (dnaE)
Enzymes [BR:
nur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATY38_13390 (dnaE)
DNA replication proteins [BR:
nur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATY38_13390 (dnaE)
DNA repair and recombination proteins [BR:
nur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATY38_13390 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ALQ52644
UniProt:
A0A1H2FAL1
LinkDB
All DBs
Position
2877251..2880754
Genome browser
AA seq
1167 aa
AA seq
DB search
MPTKPAFIHLRMHSEYSILDSTIRIHDVVKKAVADQMPGLALTDLANLFGLVKFYQTTYK
NGIKPILGCDIWIANESDRSKPIRLLVLCQTHAGYLLLSRLLSRAYRENQFQNRAEIKES
WLQPDDWGTEGLIALSGARVGDIGLSLLQNNILQAEIQIQKWANLFPDRFYLEIQRDGHA
NETMLVQHSLALARKFSLPIVATQAVQFLNAEDYQAHEARVCIAEGYILEDKRRQKSFTE
QQYFKTQAEMTQLFADIPAALTNTIEIAKRCNLVLELGVNRLPLFPTPNNEGLDQYLRSQ
AEIGLIKRMTNLFPDTEVRNARIVQYQSRLEFEVNTIIQMGFAGYFLIVADFINWAKHNN
VPVGPGRGSGAGSLVAYSLGITDLDPLRYDLLFERFLNPERISMPDFDIDFCQDRRELVI
EYVKQRYGMGKVSQIATFGTMAAKAVIRDIGRVMDLPYNFVDQLAKLIPFEIGMTLKKAR
QLEPQLNQRAEEEEDVRNLLELAESLEGITRNVGMHAGGVLIASSEITDFCPIYCTESGD
SIVSQLDKDDVEKIGLVKFDFLGLRTLTILDRAVGYIRQLHPNIDSHESRPFSLETLPLD
DDATYALMRKGNAVGIFQFESRGMIDLLQKAKPDRFEDIIALVALYRPGPMDLIPEFIDR
KHGRKQIEYLDPRLEPILGSTYGIMIYQEQVMQIAQVIGGYSLGSADLLRRAMGKKKVEE
MAQQRDIFVSGAINNGLSEDKATELFGLMEKFAGYGFNKSHAAAYALIAFQTAYLKAHYP
AEFMAACLSADMDDTDKVHIFVEDSIANGIIILPPDINLSDYRFIPVDSKNIRFGLGAVK
GTGESAVNSIIAVRRQTGPFTDLFDFCSRVDRRIANRRVMESLIRVGAFDIINPNRASLM
ASVGLAIESAEQASRSSNQINLFGETSNDSQMQPQLIKAESWHDREKLHQEKIGLGYYFS
GHPFNTYASELRHFIGTRLDRLNPQREPQLLAGIIHSIRIQMTRRGKMGVISLDDGKARI
ELVIFSELFDANRTWLKEDQLLIAEAKIGMRGYNGDEEDGLRITAERLYNLAGIRSRFAK
QIKIYCSLLTLDQISGLKKLLIPFCTQTQKSIADFCPITVIYRNDIASGELDLGNDWRVH
LHDDLLQSLNTHFKTENVEIVYSKNNK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccaaaccagcttttattcatttacggatgcacagcgaatattccattctggat
agcaccatacgtattcatgatgtcgttaaaaaagccgtagccgaccaaatgccgggcctg
gcattgactgaccttgccaatcttttcggtttggtaaaattttaccaaactacatacaaa
aacgggattaaaccaatcctcggatgtgatatctggatcgcaaatgaatctgatcgaagc
aagccgattcgattactagtgctatgtcagacacatgcaggttatttgttattgtctcgc
ctgctgtcgcgtgcctaccgcgaaaaccaatttcaaaatagagcggagatcaaagaatcg
tggctgcaacccgatgattggggcacggaagggctcattgctttatcaggcgctcgtgta
ggtgacattggattatcgctgttacaaaataatatattacaagctgaaattcagatacaa
aaatgggcaaatctgtttcccgatcgtttttatcttgagatccagcgtgatggccatgcc
aatgaaacaatgctggttcagcattcgctcgcgctggccaggaaattcagtttgcccatc
gtagcgacgcaagcggtgcaatttctcaatgcggaagattatcaggcgcatgaagcgcgt
gtttgtattgctgaagggtacattctggaagacaaacgtcgccaaaaaagttttacggaa
caacaatatttcaaaacccaagctgaaatgacacagctgttcgccgatattcctgcggcg
ttgacgaatacaattgaaattgccaagcgctgtaatctggtattggaattgggtgtgaat
cggcttccgctatttcctacgcctaataacgagggcttggatcagtacctgcgaagccag
gctgaaattggcttgataaaacgcatgacaaacttgtttcccgatacagaagtgcgtaat
gccagaatcgtccagtatcaatcccgcctcgaatttgaggtcaataccattatccagatg
gggtttgccggttattttctgatcgtcgctgattttatcaactgggccaagcataacaat
gttccggtaggacccgggcgcggttccggagcaggctcattggtagcttattcacttgga
attactgatcttgatccgttacggtatgacttgttatttgagcgttttctgaatcccgaa
cgtatctcgatgcccgattttgacattgacttttgccaggaccggcgcgagctggttatc
gaatatgtcaagcagcgttacggaatggggaaagtctctcaaatcgccacatttggtacg
atggctgccaaagccgtaatccgtgatatcggccgggttatggatttaccgtacaacttt
gtcgatcagctcgctaagctgataccgttcgagatcggtatgactttaaaaaaagcacgc
caactcgaaccacagctcaaccaacgtgccgaggaggaggaagatgtccgcaacctcctg
gaattagcggaaagcctcgaaggcatcacacgcaatgtcggtatgcatgccggaggggtg
cttatcgcctcaagcgaaatcaccgatttttgcccgatctactgcaccgaatccggtgat
tccatcgtcagccagctggataaggatgatgttgaaaaaatcggtctggtgaaatttgat
tttcttggattacgcacattgacaatcctggatcgtgcggtcgggtatatccgccaatta
catccaaatatcgactctcacgaatcccggcctttttcactggaaaccttaccattggat
gatgatgcaacttatgcattaatgcgtaaaggtaatgcggtaggcatctttcaattcgag
tcgcgtggcatgatcgatctgctacagaaggcaaaaccggatcgctttgaagatattatc
gcgctggttgcattataccgccctggcccgatggatctgattcctgaatttatcgatcgc
aaacatggtagaaaacagattgaatacctcgatccgcgcctggagccgattctggggtcg
acttatggcatcatgatttatcaggagcaagtcatgcagatcgcgcaagtcattggcggc
tacagtcttggcagcgccgatttactgcgccgcgcgatgggcaagaagaaggtcgaggaa
atggcgcaacagcgtgacatttttgtctccggtgcaatcaataacggtttgagtgaggat
aaagctactgaattgttcggtttaatggaaaaatttgccggctatggcttcaataaatcg
catgccgctgcttatgcgctcattgcgttccaaactgcttacctgaaagcgcattatccg
gcagaattcatggccgcttgtttgtccgccgatatggatgacacggataaagtacatatt
ttcgttgaagacagcattgccaatggaataataattctgccacccgatattaacctttcc
gactaccgtttcattccggtggatagcaaaaacatccgcttcggtcttggcgcagttaaa
ggtaccggagaatccgcagtcaattccatcatcgcagtacgcaggcaaactgggccattc
accgatttatttgatttctgcagtcgtgtcgaccgacggatcgccaatcgccgtgtgatg
gaatcgctaatccgtgtgggtgcgtttgatatcatcaatcccaaccgcgccagcttaatg
gcttcagtcggtttagccatagaatccgccgaacaggcaagccgatcttccaatcaaatt
aatttatttggtgaaacaagcaacgattcacagatgcaaccacaattgattaaggcggaa
tcatggcacgatcgagaaaaactgcatcaggagaaaatcggcctaggctattatttcagc
ggtcatccttttaacacctatgcttcagaactgagacactttattggtacccgacttgac
cggctaaacccgcaacgtgagccgcaactgctcgctggcatcattcactcgattcgcata
caaatgacgcgccgcggaaaaatgggagtcatcagtctggacgatggaaaagcacgaata
gaattggttatttttagcgaactctttgatgcgaatcgtacttggctaaaagaggatcaa
cttttaatcgcagaagcgaaaataggcatgcgcggatacaacggagacgaagaagatgga
ttgagaattaccgccgagcggctgtataatctcgccgggatccgctcgcgtttcgcaaaa
caaatcaagatttactgcagtctcctcaccctcgaccaaatatccggccttaaaaaattg
ttaataccgttttgcactcaaacgcaaaaatctattgcagatttttgcccgattactgtc
atctatcgcaatgacatagccagcggtgaactggacttgggaaatgactggcgggtacat
ttgcatgatgatctgctgcagtcattaaatacgcattttaaaactgagaacgtggagatt
gtttattcaaaaaacaataaataa
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