Nematostella vectensis (starlet sea anemone): 5510514
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Entry
5510514 CDS
T01037
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03022
Basal transcription factors
nve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
5510514
09124 Replication and repair
03420 Nucleotide excision repair
5510514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5510514
03400 DNA repair and recombination proteins [BR:
nve03400
]
5510514
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
5510514
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
5510514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
SinI
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
5510514
NCBI-ProteinID:
XP_001630974
UniProt:
A7SBP9
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MAAVDSDKWGCSFFRHLQRKDLYEYLSGLPVGILDRLFCHPATCLTVFRELPELAKHFVM
RTLFADQPVPESIVSTWVKSAYYKYNIGSLNTLKQLRIWREVPSGVHKRYEMNATFRTNM
KAALCGGGKSWMGSTQHLGPDKHTREPDFLDKYAIERWESVLHFMTGSTEMADNAGGVSQ
DVVKVLVLSGLMKCESPGSNPIISPAGFQFLLLDRPSQVWYFMLQCLETVEARGMDLVEC
LSLLFQLSFSSPGKDYPTDGLTDSQMKFLQQLREIGLVFQRKRKSRRYYPTKLSVNLTAA
GKGINTTDSQIEAGFIIIETNYRVYAYTESCLQVSLIGLFCEILCRFPNLCVASLTRESC
QQALASGISAEQILNFLQTRAHPEMLKRTPIIPSTISDQVRLWEMERSRMKFTEGVLYNQ
FLSQADFEMLRKYAEDLGVLIWANSTKRVVVVSRSGHDDVKRFWKRQRQGP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggatagtgataaatggggttgctccttctttcgccatttgcagcgaaag
gatctttatgagtatttatctgggcttccagttgggattctagacagattattttgtcac
ccagcaacttgccttaccgtattcagagagcttcctgaacttgcaaaacactttgtgatg
agaacgttgtttgctgatcagccggtacctgaaagcatagttagtacatgggtgaagagt
gcatattacaagtataacataggttccctgaatacgctgaagcagttgagaatctggcgt
gaggtacctagtggagtgcataagcgatatgagatgaacgcaaccttcaggacaaatatg
aaggctgcattatgtggagggggaaagtcatggatgggctcaacccagcaccttggtcca
gataaacacacaagagagccagatttcttggataaatatgctatcgagagatgggagagt
gttcttcatttcatgacgggctccacagagatggcagacaatgcaggaggtgtcagccaa
gatgttgtgaaagttcttgttttgagtggactcatgaaatgtgagtcccctggctcaaat
cctattatcagtcctgctggcttccagttccttctcttggacagaccctcacaagtctgg
tacttcatgcttcaatgtctagaaacagtggaggccagaggcatggaccttgtagagtgt
ctgtctttgctttttcagctcagcttctcatctcctggaaaggactatcctactgatggg
ctcactgatagccagatgaagtttcttcaacaattaagagaaataggcttagtattccaa
agaaagagaaagtcaaggagatattatcccacaaaattatctgttaatttaacagcagca
gggaaaggaattaatactacagattcacaaatagaagctgggtttattattattgagaca
aactacagagtatatgcatacacagagtcttgccttcaagtgtccctcatcggattgttc
tgtgagatactctgtagattcccaaacttatgtgtggcaagtttaacacgagaaagctgt
cagcaggctctagcaagtggaatttctgcagaacagattctgaattttctgcaaacgcga
gctcaccccgagatgttaaaaagaaccccaattataccatcgaccatcagtgatcaagtc
cgcctgtgggaaatggaacgcagcagaatgaagttcaccgaaggtgtgttatacaaccag
tttctttcacaagcggactttgaaatgctccgcaaatatgccgaggacctcggcgtactc
atctgggcgaactcgaccaaaagagtcgtggtcgtcagtcgctcaggacacgacgacgtc
aagcgattctggaagagacagcggcaaggcccatga
DBGET
integrated database retrieval system
