Nematostella vectensis (starlet sea anemone): 5522239
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Entry
5522239 CDS
T01037
Name
(RefSeq) probable histone deacetylase 1-B isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03082
ATP-dependent chromatin remodeling
nve03083
Polycomb repressive complex
nve04330
Notch signaling pathway
nve04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
5522239
03083 Polycomb repressive complex
5522239
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
5522239
04350 TGF-beta signaling pathway
5522239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nve03036
]
5522239
Enzymes [BR:
nve01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
5522239
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
5522239
HDAC complexes
Sin3A-HDAC complex
5522239
BRAF-HDAC complex
5522239
REST complex
5522239
SHIP complex
5522239
MiDAC complex
5522239
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
5522239
Heterochromatin formation proteins
Other heterochromatin formation proteins
5522239
Chromatin remodeling factors
NuRD complex
5522239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
5522239
NCBI-ProteinID:
XP_001641983
UniProt:
A7RFA3
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MAYTSAGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
AMEEITRYHSDDYIKFLKSIRPDNMSDYTKQMQRFNVGEDCPVFDGLYEFCQLSTGGSIA
GAVKLNKQHTDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGRGKYYAVNFPLRDGIEDESYQQ
IFQPIITKVIEIYQPNAVVLQCGADSLAGDRLGCFNLSLKGHAKCVEFVKSFNLPLLILG
GGGYTIRNVARCWTYETSVALDSDIANELPYNDYFEYFGPDFKLHISPSNMTNQNTPDYL
DKIKQRLFENLRMIPHAPGVQMQPIPEDAFPAESDNEDEEDPNQRISIRASDKRIACEEE
FSDSEDEGEGRRDVRENRPHKRPRGYASDKAVTNGNAENANGGSDEAKSTSSNSGNTPAS
KPAPDAEDKPKSSSGTSTPKEGVPKTIGSTTAADTTAQASPAQDVNRKSPVSEAEAPKPS
AAKEEAEPEQMDTSEPEPAKEPSSEIKPEASKPETAKPEATSPTVDGEPAKPEPAEESSA
KPSEEAEIMEE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacacatcggctggcggcaagaaaaaagtttgctattattacgatggtgacatc
gggaactactactatggccaagggcatcccatgaaaccgcatcgtattcgtatgacacac
aaccttctgcttaactatggcttgtacagaaagatggagatataccgacctcacaaggct
gcgatggaagaaataaccagatatcactcagatgactacattaaatttcttaaatcaatc
cgtccggacaacatgtccgactatacgaagcagatgcaaagatttaatgttggtgaggat
tgccctgtatttgatggactgtacgagttctgtcaactatcaactggaggttctatagct
ggtgcagtaaagctcaataagcaacacacagatatcgctataaactggtcaggaggcctg
catcacgccaagaagtctgaggcttctggcttctgttatgtgaacgatattgtgctggct
atcttagaactgctcaagtatcaccagcgtgtgctgtacatagacatagacattcatcat
ggcgatggggtggaggaggcgttctacaccactgacagggttatgacagtatctttccac
aagtacggcgagtatttcccagggacgggagacttgagggatattggagcagggcgtgga
aagtactatgccgtcaactttcctcttcgagatgggattgaagacgagtcgtaccaacaa
atctttcaacctattatcactaaagtgatagagatctatcaaccaaatgctgtagttctg
cagtgtggtgctgactccctggctggcgacaggcttggctgcttcaatctctccctcaaa
ggccatgcaaagtgtgttgaatttgtcaagagcttcaacctgccgttactcatcctcggt
ggtggcggttacaccatcagaaatgttgctcgttgctggacctacgagacatcagtggcc
ctggactcggatattgccaacgagttgccatacaacgactactttgagtacttcggtcct
gactttaagctacacatcagtccgtcaaacatgaccaatcagaacacacccgattacctg
gataaaatcaagcaaagactgtttgagaatctgaggatgattccacatgctcctggtgtt
cagatgcaacctattcctgaagatgcctttccagcagagagtgacaatgaagatgaagaa
gacccaaatcagaggataagcatccgagcctctgacaaaagaattgcttgtgaagaggag
ttctcagattctgaggacgaaggtgagggtcgtcgggatgtccgggaaaacaggccacac
aaacgacctcgaggctatgcttctgacaaggcggtcaccaatggcaatgcagaaaatgcc
aatggtggcagtgatgaggcaaaatccacatcctcaaactctggtaatacccctgcttct
aagcctgctcctgatgctgaggacaagcccaagagctccagtgggactagcacgcctaag
gagggtgtgcccaagactattggtagcacaacagccgctgacaccaccgcccaggctagc
cctgcccaagatgtcaataggaaaagccctgtgtcagaggccgaggcccctaaaccgagt
gcagccaaagaggaagctgaaccagaacaaatggacacctccgagccagagcctgcaaaa
gaaccctcaagtgagattaaacccgaagcatctaaaccagaaactgccaaaccggaagcg
acctcccctacagtagacggagaaccagcaaaaccggagccggcagaagagtctagcgct
aaacccagcgaagaagccgagattatggaggaatag
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