Nematostella vectensis (starlet sea anemone): 5525240
Help
Entry
5525240 CDS
T01037
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
5525240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nve03400
]
5525240
Enzymes [BR:
nve01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
5525240
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
5525240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
DNA_ligase_IV
RNA_ligase
BRCT
mRNA_cap_enzyme
BRCT_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
5525240
NCBI-ProteinID:
XP_032231571
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MADSRSPSVASQVPFFNFCMAMERICEAKGSIEKKRDPLRKLISSWREAHRRIHGSTKTT
DSLFPLLRLLLPHLDKDRPAYGMKENIFARYIIDVMSLGKDSSSGRKLLNYRHPSSSKQD
SQGDFASVAYFVLKDRCPEKGSLNIEEVNKLLDDMANANLEKKRDNVKMSIQMLLRESSA
KEVKWLIRIILKELKMGLGENSVFAVFHPDALDHYNTCNNLSKVCMDLHDPSVRMNEAEI
TIFSAFRPMLAQWSPLNQVEDLMKNQPFYIETKMDGERFILHKDGDKYRYFSRGGNDFTH
TFGENSREGCLTPKINDCFERSIHSCILDGEMLVYDTSNEIFITKAMHVDVKSAATFNAV
RQPCFVVFDVLLYNGKKLANTPLHERLKLLETVFKPCLGFLQFVERQNASSNEEVIKSLN
EAIDRREEGLVVKSRDSVYKPNVRNGGGWLKIKPEYVASLSDDLDVVIVGGYFGVGRRQG
MVSHFLCAVAVPSDRRGEKPSQFYSLCKVGSGYTMNELDELGQQLKPHWQPFNQAKPPKS
VCFTPGFKEKPDVWIEPSKSKVVQIKAAEITPSEKYRAGFTLRFPRLECVRHDKSWYDCL
DLSGLEQLLKKAEGKLTSRHTSLGEESAPAKKRSRTTQKRAEQMRMSVAPQFKPSEVSTV
AKVSKLFEGKEFCIVTGPATHPKPSLEKMITQIISYFIVCRDGRFDVVQAAWLIDCMNQA
KLLPWQPAQMLHTSSATTAKFREEYDRHGDSFTCDATADSLKTVFHNIANDDISITAKEI
ADIEQRYFPASTPHNLFRTCRVYLDKLKDIDNPDTVIPDCSLELTALELRCHGAHIQERF
DETVTHVVFDDRDLSRLPTYQQIMRNRPKKHHFVTEKWVTQSIGNERILSERQFAPRAYT
SAS
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccaggagcccgtctgtagcttcacaagtcccatttttcaacttttgcatg
gcgatggagaggatctgtgaagccaaaggaagcatagaaaagaaaagggatcctttaagg
aagcttatttctagctggagagaagctcatcgcaggattcacggtagcacaaaaactaca
gactcattgtttccattgttgcgtctactgttgccacatctggataaggatcgccctgct
tatggcatgaaagaaaacatcttcgctaggtacattattgatgtcatgagccttggtaag
gatagcagcagtggacgcaaattactgaactatcgacatccatcctcctccaaacaggat
agccagggtgactttgcaagtgttgcatattttgttttaaaggaccgttgtccagaaaag
ggaagtttgaatattgaagaggtaaacaagctgttagatgacatggccaatgctaatctt
gagaagaagagagacaatgtcaagatgtccattcagatgctactgcgggaatctagtgcc
aaagaagtgaaatggctcatcagaatcattctaaaggagctgaagatgggtttgggagaa
aattcggtatttgctgtctttcatcctgatgcccttgatcattacaatacctgtaacaac
ttatccaaggtttgcatggatcttcatgatcctagtgtccgcatgaacgaagcagaaata
actattttctcagcattcaggcccatgcttgcacagtggagtcccctgaatcaggtagag
gatttgatgaagaatcaaccattttacattgagaccaagatggatggagaaaggttcatc
cttcacaaggatggtgacaaataccggtatttcagcagagggggaaatgacttcactcat
acttttggagagaattcccgtgagggttgcctcactccaaagatcaatgactgttttgaa
aggtcaatccattcatgcattctggatggagagatgttggtttatgacacatccaatgaa
atttttattactaaagcaatgcatgtggatgtcaagtcagcagctacctttaatgctgtt
cgtcagccctgctttgttgtctttgatgttctcctgtacaatggaaaaaagcttgccaac
acaccattgcatgaacgcctcaaactccttgaaacggtttttaagccttgtctagggttc
cttcaatttgttgaaagacaaaatgcatcatcaaatgaagaagtgatcaagtctttgaat
gaagcaattgatcgacgcgaggaaggcttggtagttaagtcacgagactctgtctacaaa
cccaacgtcagaaacggtggtgggtggctcaagataaagccggagtatgtcgcgagccta
agtgatgacctcgatgttgtcatcgttggaggatatttcggtgttgggcgtcgccaagga
atggtgtctcacttcttatgcgcagttgcagtgccgagcgaccgtcgcggcgaaaaacca
tctcaattctattccctctgtaaagttgggtcaggttatacgatgaatgagttggatgag
ctgggacaacagctgaagccgcactggcagccattcaatcaggctaaaccccccaagagt
gtctgcttcacaccaggatttaaggaaaagcctgacgtgtggatcgaaccctcaaagtct
aaagttgttcagatcaaagcagctgagatcacacccagcgaaaaatacagggcaggattc
acgctacgatttccgcggttggaatgtgttagacacgataaatcctggtacgactgcctg
gacctatcaggactggaacaactcctaaagaaagcggaaggcaagctaacctctcgtcac
accagtctgggagaggagtccgctccagccaaaaagagaagccgcaccacgcaaaagcgc
gcagaacaaatgcgcatgagtgtcgcgccgcagtttaaaccttcggaggtatcaaccgtg
gcaaaggtatcgaagcttttcgaaggaaaggagttctgtattgtgactggacctgccact
cacccaaaaccctccctggagaaaatgataacacagataatttcatattttattgtttgt
agagacgggcgatttgacgtcgtacaagcagcatggcttatcgattgtatgaaccaggcc
aagctgctgccatggcaacctgctcagatgctacatacgtcatcagcaacaaccgcaaag
ttccgagaggagtatgatcgccatggtgacagcttcacgtgtgatgcaaccgcggattcg
ctaaagacagttttccacaatatcgccaatgatgacattagtataactgcaaaggagatt
gctgacatagagcagcggtattttcccgccagcacaccacacaacttgttccgtacatgc
agggtctaccttgacaagctcaaagatattgataacccagacacggtgatccccgactgt
agtctagagctgacagctcttgagcttcgttgccatggcgcccacatacaagagcggttt
gacgagacagtgacacatgtggtgtttgatgaccgagatttgtcaagattaccgacatac
cagcaaataatgcgaaatcgaccgaagaaacaccacttcgtcacagagaaatgggtaacg
caatcaattggcaacgagagaatcttgtccgaaaggcaatttgcacctcgagcgtatact
tcagctagctag
DBGET
integrated database retrieval system
