Neodiprion virginianus: 124297928
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Entry
124297928 CDS
T09046
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nvg01002
]
124297928
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvg04121
]
124297928
Enzymes [BR:
nvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124297928
Peptidases and inhibitors [BR:
nvg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124297928
Ubiquitin system [BR:
nvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124297928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
124297928
NCBI-ProteinID:
XP_046605318
EnsemblRapid:
ENSNVRG00000002316
LinkDB
All DBs
Position
2:complement(10396238..10409125)
Genome browser
AA seq
1295 aa
AA seq
DB search
MTVDFDAMVCAVEDCGVECVVRDCTSRDAQPKFKLSLHPSTTVIDIFNYVAQHYSYDVDS
FELVLQSARGEVVELNEVKEKNLMEIGLNFSNETKYTLVVSDVSRHTSKDAAANRTISSI
KTPLFSPSSGDYNRPAPAFQSQIQEFTFNHKSVIKSETSYVGLVNQAMTCYLNSLLQALY
MTPEFRNALYNWEYVDGSEKDEAKSIPYQLQKLFLNLQTSTKPAVETTSLTKSFGWDSTE
AWQQHDIQELCRVMFDALEQKFKNTQQADLINRLYEGKMIDYVKCLECSTEKSREDTFLD
IPLPVRPFGSNVAYNSVEEALRAFVQPETLDGTNQYHCEKCNKKCNAHKGLKFSKFPYLL
TLHLKRFDFDYNTLHRIKLNDKVTFPDVLNLNSFVASTSAHESPGREEDTGVGVKCDDSS
TTDSGTLDDECPPCDNSSASTNQSTNHDQDDDEGIDVSNGPSTSSCSNHNHENEKNSGNR
AIDKGPYQYELFSIMIHSGSASGGHYYAYIKDLMTQEWFCFNDQSVTRITYDDIQKTYGG
GPTRAYYSGAYSSSTNAYMLMYRQIDPHRNKLPMQAVNFPKHIQDLLKKMKESEENDRKN
REKQMSMCKLKVYCHHPEEGRLTDAKLYVLQDETLQETTEVAHRRLGLEGIVKLDQCRLV
SYDHNEDLIERSWEGSELMEPIGDIWRNNSRFDLLLQIRRKDEQFETYLPGGVATKVFVV
DIDKEEVVDGPISVRGLLTQTIREYKLELSKLLKLDAKQIKLVLQKYPSDSRLLDKDDNM
LQSEGFYGPNKIFVATALDTDETKPFHESKLQKIIENFEYIISLRVLLPDTSKETLDDLN
IPSLEETRKGQEKSIANGPIKSSLGDMMNTMMTKNSEQTKPSCGIEETPPKTNTSAQLGE
GEDWNTPEQSNSEDSSLSDSERTLMGDVPDYTNCVEPQFPNSGIVFDYAPPKLTRMENWD
IDDESDYYFKAIPHSEDSQKLLKVLVDKRMQLSTLKKDLEPLVGVPVEYFKVFRHSSDSG
ETECSRLTEQLSCYQDGERLSVKLGRALRSGEFKVKLFQLLIHSTEPFKFLCDWIVSNEM
TVGQAKKEILAEIKRKYNIDIPYEKCRLRRKNYKTASKVCLDEEKFEVLRLYTQCELFVQ
ELPDKETVKDYNQVVLFVRKWSPSQMQLTPFEEITMNGKSIEELKEKLSSISDIPAQYIE
VAKGRNAFPCDISVLQVQSELNWNHQATTIDTLPLNLEDGSVVYFRDSREEPKQLSSEEL
KEIASKESSRLTSLSSTSSYSPRRERALKIYLDTK
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggattttgatgctatggtgtgtgccgtcgaagactgtggtgtggagtgcgta
gttcgtgattgcacttcacgagatgcccagccaaagtttaagctttctcttcacccatcg
acgacagttattgatatcttcaactatgtagctcaacattattcctacgatgtggacagc
tttgagctggtgctacaaagtgcacgtggtgaagtggtcgagctaaacgaagtaaaggaa
aaaaacctgatggaaattggattgaattttagtaacgagacaaagtacacactggtcgtg
agtgacgtttctcgccatacttcaaaggatgcagcggccaacagaactatttcatccatc
aagactccattgtttagtccatcctctggagattacaaccgaccagctccagcattccag
tcacaaatccaggagttcacttttaatcataaaagtgtcatcaagtctgagactagttac
gtcggtctggtgaatcaggcaatgacgtgttacctaaacagccttttgcaagccctctac
atgaccccagagtttaggaatgctttgtacaactgggaatacgtcgatggttcagagaaa
gatgaggccaaaagtattccatatcaactgcagaaattatttctaaatttgcagacgtca
acaaagcctgcagtggagactacttctttaacgaaaagctttggttgggactcaacggaa
gcatggcaacagcacgatatacaagagctgtgccgagtgatgtttgatgccctggaacag
aagtttaaaaacacacagcaggctgacctgatcaataggctttacgaaggaaagatgatc
gactatgtaaagtgcctagaatgtagtactgaaaagtctagagaggatacttttctggac
attcctttacctgttcggccattcggcagcaatgtcgcgtacaatagcgtggaggaagcc
ttgcgagcgtttgtgcaacctgaaacactggacgggacaaatcagtatcattgtgaaaag
tgtaacaaaaaatgtaacgcacataaggggttgaaattttcaaaatttccgtaccttctt
acattacatttgaagcgatttgactttgactacaatactctccacagaatcaagctgaat
gataaggtaacgtttcccgatgttttaaatctcaattcctttgtcgcatcaacatctgct
cacgagtctccaggtagagaggaggacactggcgttggagtaaagtgtgatgatagttca
acgacagacagtggaacattagacgacgaatgtcccccgtgtgataacagcagtgcaagt
actaatcaatctacaaatcacgatcaagatgatgatgaaggtatagatgtaagcaatgga
ccctcaacctcaagttgcagcaatcacaatcatgaaaatgaaaagaattctggaaatcgt
gcaattgataaaggtccatatcagtacgaactcttctccatcatgattcacagtgggagt
gcaagcgggggtcattactacgcgtatatcaaagatctcatgactcaagaatggttttgc
tttaatgatcagagtgtcacgaggataacttatgacgatattcaaaagacatatggtggt
ggacctactcgagcttactatagtggagcatacagcagcagtacaaatgcttatatgctt
atgtatagacaaatagatccacatcgtaacaagctgccgatgcaagcagtaaactttccc
aaacacatacaggatcttttgaagaaaatgaaagaaagtgaagaaaacgaccgaaagaac
agagaaaaacagatgtctatgtgcaagcttaaagtgtattgtcatcacccggaagagggc
aggctcacagatgcaaaactttacgtattgcaagatgaaacgttacaagaaacgacagag
gtggctcacagaaggcttggtttagaaggaatagtaaagctagatcaatgtcgattagtt
agttacgatcataacgaagatttgatcgaacgaagctgggaaggatccgagttgatggaa
ccgatcggtgacatttggcgtaataacagccgattcgatctcctgcttcaaatacgtcgg
aaggacgagcagtttgagacttatttgccaggaggtgttgcaacgaaagtatttgttgtt
gatattgataaagaagaagttgttgacggtccgataagtgtgcgaggtttattaactcag
accatcagggaatacaaactcgagttgtcaaaactgttaaaattggatgccaagcagata
aaattggtcctacaaaaatatccttcagacagccggttgctagataaagatgacaatatg
cttcaatctgagggattttatggtccgaataaaattttcgttgccacagctttggacaca
gacgaaacgaaacctttccacgaatctaaactccaaaagattattgaaaatttcgagtac
atcatctcccttcgcgtattgttacctgacacaagcaaagaaacattagacgatttgaat
attccatccctcgaggagacacgcaaggggcaagaaaaatcgatagcgaatggtccgata
aaatcatctcttggtgacatgatgaacacgatgatgacaaagaacagcgaacaaaccaaa
cccagttgcggaatcgaggaaacacctccgaagactaatacatctgcgcagcttggagag
ggcgaagattggaatacacctgagcagagcaacagcgaggatagcagtctgagtgatagt
gaacgaacgttaatgggggatgttcccgattatactaattgcgtagaacctcaattcccc
aattctggaatagtttttgattacgccccacccaaattgactcgtatggaaaattgggat
atcgatgatgaatctgattactatttcaaagctattcctcactcagaagattcgcaaaaa
ttacttaaagtactggtggataagagaatgcagttgagcaccctgaagaaggaccttgag
ccgctcgtgggtgttccagtagagtatttcaaagtcttccggcactcgtcggactccggg
gaaacagagtgcagtagactaactgaacaattaagttgttatcaagacggcgagagactc
agtgtgaaattaggacgtgctttacgcagcggagagttcaaagtcaagctgttccagcta
cttattcattccactgagccatttaaatttttgtgcgattggatagtatctaatgaaatg
acagttggtcaggcaaagaaggaaattctagccgaaataaaaagaaagtataatattgac
ataccgtacgaaaagtgtcgtttgaggaggaaaaattacaagacagcgtcaaaagtatgt
ttagacgaagaaaagttcgaagtattacgtttatatacacaatgcgaattattcgtacaa
gaactacctgacaaggagacagtcaaagattacaaccaggttgttctgtttgtgaggaag
tggtcaccttcccaaatgcaactaactccattcgaagaaatcacgatgaatggaaagtcc
attgaagaactgaaagaaaagttatcctcgatatcagatataccggcgcagtacatagag
gtagccaagggtagaaacgcatttccctgtgatatctctgtacttcaggtgcaaagtgaa
ctaaactggaatcaccaagcaacaactatagataccttaccacttaatcttgaagacggc
tcagttgtctactttagggatagcagagaagaacctaagcagttgagctccgaagagctc
aaggagatcgcaagcaaagagagttcgcgtctgacgtcactctcatcgacgtcaagttat
agtccgcggcgagagcgagcgctaaaaatatatttggacaccaaatga
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integrated database retrieval system
