Neodiprion virginianus: 124299470
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Entry
124299470 CDS
T09046
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvg03009
]
124299470
Enzymes [BR:
nvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124299470
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
124299470
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
124299470
NCBI-ProteinID:
XP_046608619
EnsemblRapid:
ENSNVRG00000010346
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All DBs
Position
3:35179646..35183205
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AA seq
584 aa
AA seq
DB search
MKSQKWEDLEVPLSKPILETLKVQNFQTMTPVQTACIPLLLKGKDVAAEAVTGSGKTLAF
LIPMLEMLQRREDGWKKLEIGSIIVSPTRELATQINEVLANFLIRIPTLKQVLLVGGTTV
DEDVIKLKNGANIIVATPGRLEDILSNCKDINLASSVKALELLVLDEADRLLDLGFTATI
NTILSYLPRLRRTGLFSATQTKELQQLIRAGLRNPVVVSVKEKASTSTPSMLINSCVIVT
AENKLATMYNFIKKKGTDLKYMIFFSTCACVDYFSHVLKMLFQSSNIFALHGKMKDKRYK
IFEQFRSSDNGLLLCTDVMARGVDIPEVDWVLQYDPPSNASSFVHRCGRTARIGNEGNAL
LFLLESEDAYIDFIRRNQKVDLNKIELELPTSVVKCLKVMRSIQQSDRLIFDKANRAFVS
YIQAYQKHECSLILRLKDLNLGKVAMGFGLLKMPRMPELKKQDTSLFQDPAVDVNSIAYK
DKQRESKRLEKLKVFRQTGIWPTKNKRPAKQTEPWSETKKKKLDTKDKRNKRKEKKALTG
PVKKKRKKVCQEDIEELAKDIALMKKLKKKKISQEQFDSAFGVN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctcaaaaatgggaagacttggaagtcccactaagcaaacctattctggaaact
ctaaaagtacaaaactttcaaacgatgacacctgtccagactgcttgcataccgttgcta
ctaaaaggaaaggatgttgctgcagaggctgtaacgggcagtggcaaaacactggcattc
ttaattccaatgctagaaatgttacagagacgtgaggacggttggaaaaagttggaaatt
ggtagcattattgtatcaccaacacgggaattagctacacagataaacgaagtccttgcc
aactttctgatccgcattccaactttaaaacaagtgttgctagtcggtgggacaactgtt
gatgaagatgtaataaagctcaagaatggtgctaatattattgtagccacccctggaaga
ttggaagatattctgtcgaattgcaaagatatcaatttagcctcaagcgtgaaagctttg
gaattactggtactagatgaagctgataggcttctagatttgggatttacagcgacgata
aatacaattttgagctatttacctagattacggagaactggattgttctcagcgactcaa
acaaaagaattacagcaattgataagagctggcttacgtaatccagttgtagtgtcagtc
aaagaaaaagctagtacttctaccccttctatgttgattaacagttgcgtgattgtcacc
gcagaaaataaacttgctaccatgtacaactttatcaaaaagaaaggaactgatctgaag
tacatgatatttttttcgacatgcgcctgtgtcgattattttagtcatgttcttaaaatg
ctctttcaatcttcaaatatatttgcacttcatgggaaaatgaaagataaacgatataaa
atttttgaacagtttcgaagctccgataatggtttattattatgcaccgatgttatggca
cgtggagttgatataccagaagttgattgggttttacaatatgatccgccatcgaatgcc
agtagctttgtacacagatgcggccgcacagccagaatcggtaacgagggaaatgctcta
ttatttctgttggagtccgaagatgcttacatagatttcatcaggaggaatcagaaagta
gatttaaataaaatcgaattagaactacctacaagtgtggtgaagtgtttaaaagtcatg
agaagtatacagcaaagtgatagacttatatttgataaagctaacagggcatttgtatca
tatatacaagcttaccaaaaacatgaatgcagtcttatactcaggttaaaggatctcaac
ttaggaaaagttgctatgggttttgggttattgaaaatgccccgaatgccagaacttaaa
aaacaggacacgtcattgtttcaagatcctgcagttgacgtaaattcaattgcttacaaa
gacaagcagcgcgaatctaaaagattggagaaattgaaagtcttccgacaaacaggtatt
tggccaacaaagaataagcgtcctgccaagcaaactgaaccctggtctgaaactaagaag
aaaaaattagatacaaaggataaacgtaataagcgtaaagaaaaaaaagctcttactgga
ccagtcaagaaaaaacgcaaaaaagtatgccaagaagatatagaagaattggcaaaagat
atagcattgatgaagaaattaaaaaagaaaaagatctcacaagaacaatttgattcagct
ttcggagtcaattga
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