Neodiprion virginianus: 124300740
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Entry
124300740 CDS
T09046
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124300740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124300740
03036 Chromosome and associated proteins [BR:
nvg03036
]
124300740
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124300740
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124300740
Chromatin remodeling factors
BAF complex
124300740
PBAF complex
124300740
GBAF(ncBAF) complex
124300740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
124300740
NCBI-ProteinID:
XP_046611028
EnsemblRapid:
ENSNVRG00000008246
LinkDB
All DBs
Position
3:complement(27192174..27275927)
Genome browser
AA seq
1918 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPQQAPSPSNPQGSPMGPPQHHPHSPTQGYQGGPPMPQQ
QQPPPQQQGYPPHPQQMPPNMGPQGPGGPGSGPQQGPATPMGPGGPGQMGPNGPQGGPHM
GQGGPVQMGPGGPGGMGPGGPGLMGPSGPGQMGPGGPGPMGPGGPGGQMGPSGPGGQMGP
GVPSQMGPGGPGPQMGHSGPGQMGPGGPGQMGPGGGPGQHGPGGPGQQMGPAGLGQQMGP
GGPGQQMGPVGPGQQMGPGGPGQQMVSGNPGQQMGPGGPSQQMTPAGPGQQMGPGGPVQQ
MGPGQQMGPSGPGQMGPGGPGQQMGPGQQMGPGGPNQMGPGGPNQMGPGGPNQMGPGGPN
QMGPGGPGQQMGPSGPQGGPHMGPGGPGQMGPGSGQGAPQGGPHIGQGAPQGGPHIGQGA
PQGGPHIGQGQMGPGGPQGGNQIGPGGPSHMSGPPGSLHMGPTGPGSHIGPGGPGQMTSS
SGHSMGPGGPNQMGPSGPSSIPGGPSPMGPGGQGSQIGQNPPGSMGPSSQGQGQMGPSGP
GQMGPTGPGQMGPSGPVNQLNQTAPGQMGPGGPPVPGSTSGPVQENLNALQRAIDSMEEK
GLQEDPRYSQLLALRARQGNSMGEKQAFSTQQLQQLRVQIMAYRLLARNQPLSQQLALAV
QGGAPPPGIGQRPVDQTQGPVTPGPSPQMAGPPVVGPSGPPRPGPQTPQQQQPQQPGAKT
NRVTSIAKPAGLDPLLILQERENRVAARISLRMEQLSNLPTNMPEDLRLQAQIELRALRV
LNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRR
QKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLNHHANAEREQKKEQERIEKERMRR
LMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIGNLTEMVKQHKMEQKRKQVEEQKRKKKK
KKLQESEGGEDGNGNGDRRVSVTETSTGRKLTGEDALPLSQLPAFLESHPGWEVLDSESE
EEDSEDEENEGKFECKDKYKGDSEDDKVKKTLHKAKVEDDEYKTEEQTYYSIAHTVHEVV
TEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTHLMEKKKV
NGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEY
VIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELW
ALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK
EVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQL
RKLCNHPFMFQAIEEKYCEHVGIQGSTVTGPDLYRASGKFELLDRILPKLKATDHRVLLF
CQMTQLMTIMEDYLGWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLG
LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKL
NMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARSEGEFE
KFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEERFLGRGSRQ
RKEVDYTDSLTEKEWLKAIDDDGNEFEEEEEDDKKKKKTRKRRKKGEEDEEPIMKKRRGG
SSGTSVDPKLKRSMKKLIAVVVNYTDSTNGRLLSEPFMKLPSRRELPDYYEIIRKPLTIN
KLRQKIDEGKYSDFDELEKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRIEAEG
DNSDGDDKGDGDDGSDGDSSVKMKIKFKGKKSGENRGGRRKRVTRKYISDDDEDGEDN
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccctcgccccaatcgtctcccatgccacccccacaagcaccaagtccaatg
ggccctccccaacaagctccatccccgtccaatcctcaaggcagtccaatgggtcctcca
caacatcatcctcatagtccaactcaaggatatcagggcggtccaccaatgccgcagcaa
cagcagcctcccccacagcaacaagggtatcctccacacccgcagcaaatgccaccaaat
atgggacctcagggccctggtggtccaggatcaggaccacaacaaggtccagctacgcca
atgggacctggtggcccaggacaaatgggtccaaatggtccgcagggtggacctcacatg
ggtcaaggcggtcctgtgcaaatgggacctggtgggcccggtgggatgggtccgggaggt
ccgggcttgatgggtccaagtgggcctggtcaaatgggccccggaggcccagggccgatg
ggtcccggaggacctgggggtcagatgggtcctagcggaccgggaggtcaaatgggccct
ggggtaccaagtcaaatgggtcctggaggaccaggtcctcagatgggccatagtgggcct
ggacaaatgggcccaggaggtccaggtcagatgggtccgggaggagggcctggacagcat
ggacctggaggtccgggacagcaaatgggacctgctggcctaggtcaacagatgggccct
ggggggcctggacaacaaatgggacctgtagggcctggtcaacaaatgggtccaggaggg
ccagggcaacaaatggtttccggaaatcctggtcaacaaatgggaccgggaggccccagt
cagcagatgacccctgcaggccctggccagcaaatgggcccaggcggacctgttcaacag
atggggcctggacaacaaatgggtcccagtgggcctggacaaatgggccctggtggacct
ggacagcaaatgggacctggacaacagatgggaccaggtgggcccaaccaaatgggtcct
ggtggtcctaatcaaatgggccctggtggtcctaatcaaatgggccctggtggtcctaat
caaatgggtcctggcggacctggacagcaaatgggtccaagtggccctcagggtggaccc
catatgggacctggaggtcctggacagatgggaccgggaagcggacaaggagcgccacag
ggtggaccacatataggacaaggagcaccacagggcggaccacatataggacaaggtgcc
ccacagggtggaccacatataggacaaggacaaatggggcctggtgggccacaaggaggt
aatcaaatcggaccaggtggccctagtcacatgagtggtcctccagggtcattgcacatg
ggtcccactggacccggcagtcatattggtccaggtggaccaggacaaatgacttcaagc
agcggacactcgatgggacctggaggaccaaatcaaatgggtcctagtggtccaagctca
atacccggaggtccgagtcccatgggaccaggaggacagggatcacagataggacaaaat
cctcctggatcgatgggaccaagcagtcagggtcaaggccaaatgggcccgagtggacca
ggacaaatgggaccgacaggtcctgggcaaatgggtccaagtggcccagtcaatcagctg
aatcagacagcaccaggacagatgggacctggagggccccccgttccgggcagtacatca
ggacccgtacaagagaacttgaatgctttacagagggcgattgattccatggaagaaaaa
ggacttcaggaagatccacgttattcgcagctgcttgcgctgagagctcggcagggcaat
agtatgggagaaaaacaggctttcagtactcagcaattgcaacaacttcgcgttcaaatt
atggcatacagattattagcaaggaatcaacctttgtctcaacaattagcactcgctgtt
caaggcggagctcctcctccaggtattggccaacgtccagttgatcaaacccaaggtcct
gtcacgccgggtcccagcccacaaatggctggcccacccgttgttggacccagtggtcct
ccaagacctggaccacaaacaccacagcaacagcaacctcaacaacctggagccaagact
aacagagttactagcatcgcaaaaccagctggacttgatcctctgctgatattgcaagag
cgtgagaatagagttgctgcgcgtatcagtcttcggatggaacaactcagtaatctacca
actaatatgccagaagatcttcgtcttcaagcacaaattgaattgagagcattgcgtgtt
ctcaacttccagcgtcagcttagatctgagataatagcctgtactcgtaaagatactact
ttggaaacagcggtaaatgttaaggcctacaaaagaacgaaacggcagggtttgcgggaa
gctagagctacggaaaagttggaaaagcaacagaagttagaagccgagcgtaagcgcaga
cagaaacatcaggaatttttgagctctgttctccagcatggcaaggactttaaggaattc
catcgcaataatgttgcaaaattggcacgtttgaacaaagctgtactgaatcatcatgcc
aacgccgagcgagagcaaaagaaggaacaagaacgcatcgaaaaggaacgtatgcgtcgt
ttgatggctgaggacgaagagggttacagaaaattgatcgatcagaaaaaagacaaacgt
ttggcatttttgctctcgcaaactgacgaatatattggaaaccttaccgaaatggttaag
caacataaaatggaacaaaaaagaaaacaagttgaagaacaaaaacgtaaaaagaagaaa
aagaagctccaagaaagtgaaggcggtgaagatggtaatgggaacggtgacagacgagta
tcagttactgaaacttctactggccgtaaattgacgggcgaagacgcactacccttgagt
cagctgccagcatttttagaatctcatcctggatgggaagtactagattctgagagcgaa
gaggaagatagtgaagatgaggaaaacgagggcaagtttgagtgcaaagataaatataaa
ggagattctgaggatgataaagttaagaaaactcttcataaagctaaagtcgaagacgac
gaatacaaaactgaggaacaaacttactacagtatagctcatactgtacatgaagttgtg
actgaacaagcttctatcatggttaatggaaagttgaaagaatatcaaattaagggcttg
gagtggttggtatctttgttcaataacaatctaaatggaattttggctgatgagatgggt
ttgggtaaaactattcagactatcgctctagttacgcatcttatggaaaagaaaaaagtc
aatggtcctttcttgatcattgttcctctctcgacattgtccaattgggtgttggaattt
gaaaaatgggcacctagcgtggtagtggtttcttataaaggttctcctgctggtcgtagg
gctatacaatcacaaatgagagcaaccaagtttaatgttcttttgactacctacgagtat
gttatcaaagacaaaggtgttctagctaagctgcaatggaagtacatgattattgacgaa
ggtcacagaatgaagaatcatcattgcaaactgacacaagtactgaacactcattacctt
gcgccacatcgtttgttgctaactggtaccccattgcaaaataaactcccagaattgtgg
gcattactgaactttttactaccatcaattttcaagtcttgtagcacatttgaacaatgg
ttcaacgcgcctttcgctacgactggtgaaaaagtcgaactgaatgaagaagaaactatt
ttgatcattcgtcgtttgcacaaagtattgcgtccgttcttgcttcgtcgtctaaagaag
gaagtcgaatcccagttgccagataaagttgaatatattattaagtgcgatatgtcaggt
ttacagaaggttctttacaaacacatgcagagcaagggggttctactgacagatggctca
gagaaaggaaagcaaggcaagggtggcgctaaggctctcatgaatacaattgtgcaattg
aggaaactatgcaatcatccattcatgttccaagccatagaagaaaagtattgcgaacat
gtcggaattcaaggatctacagttactggaccggatctgtatcgagcgtctggaaagttt
gagctgttggatcgcattcttccgaaattgaaggccacggatcacagagtattgttgttc
tgtcaaatgacacaattgatgacaattatggaggattatttgggctggagaggtttcatg
tatctgcgtctagatggtactaccaaggctgaagaccgaggggatctgctaaaaaaattt
aatgatcctggatccgaatattttctctttctcttatccaccagagctggaggtcttggt
cttaatctgcaggccgcagatactgtcatcatattcgattctgattggaatccacaccag
gatttgcaagctcaagacagagctcatagaattggacaaaagaacgaggttcgcgtgtta
aggttaatgaccgtcaactctgtcgaggaacgaatattggctgctgccaggtacaaattg
aacatggacgaaaaagtcattcaggctggaatgtttgatcagaagtccacagggtcagaa
cgacaacaatttctccagagtatattgcatcaagatgacgccgatgacgaggaggaaaac
gaagtgccggatgacgaaaccgtgaatcaaatgatagcacgttcggaaggagagtttgaa
aaattccaaaaactggacttagaacgaagaagagaagaagcaaaattagggcccaaccgc
aaatcacgtcttttggaagaagcagagctgcctgactggctggtgaaagacgatgacgag
gtagaaaggtggacttatgaagaggatgaagaaagatttttaggcagaggatctcgtcag
cgtaaagaggttgattacactgatagtttaacagaaaaagaatggttgaaagctatcgat
gacgacggtaatgagtttgaagaagaagaagaagatgataagaagaaaaagaagacacgc
aaacgtaggaaaaaaggtgaagaagacgaggaaccgataatgaaaaaacggcgtggtggt
agctctggtacatctgttgatccgaaattgaaacgtagtatgaaaaaattgattgctgtt
gttgtcaattacactgacagtacaaacggccgattattgagcgaaccttttatgaaatta
ccttcaagacgtgaattacctgattactacgaaataattagaaagcctctaacaataaat
aaactacggcaaaaaattgatgagggaaaatattccgactttgatgaacttgaaaaagac
ttcatgcagttatgtaaaaatgcccaaatatataacgaagaggcatcacttattcacgag
gattcaatagttttacaatctgtttttacaaatgcaagacagagaatagaagctgagggt
gacaattccgatggagatgataaaggtgatggagatgatggttcagacggcgattcaagc
gtaaaaatgaagataaaatttaaaggtaagaaaagtggggagaatcgtggggggcgtaga
aaaagagtgacgagaaaatatatctcggatgatgatgaggatggtgaggataactga
DBGET
integrated database retrieval system
