Neodiprion virginianus: 124304774
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Entry
124304774 CDS
T09046
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124304774
04121 Ubiquitin system [BR:
nvg04121
]
124304774
Enzymes [BR:
nvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124304774
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124304774
Ubiquitin system [BR:
nvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124304774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
zf-B_box
Motif
Other DBs
NCBI-GeneID:
124304774
NCBI-ProteinID:
XP_046619348
LinkDB
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Position
5:complement(8028875..8031286)
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AA seq
613 aa
AA seq
DB search
MASRSSLSPTWTFPSRNSPGWVTREVCGNCNQSSSRNVPQVVAKCLDCTYLLCQPCLMAH
QRGRLTRNHGIQLDTRSNTPSPSSAVTSYSTPPTITFYCDVHREIIKLYCEPCEVVLCEV
CVNKDHRGHFVYQLWRATRGGEFTPLHILNEICSAISNILRGIELVEHTHENMERWVIQT
DPFLRIRISEGFPIHCEEQEKLLTAIQRIKLMRDERLERTLGIKETGAKEVLQIRQYQNS
VVPRDDDWMSFLDSNINLVNSFASVGPVTFGNPGPIGDRRSVRGRTAAIETPMGSSRIVS
NFPRHVIPRGRPVLGCDLVVSLKINRSLNSMGLRTVAICGSEGNKDGELCRPWGVCCDKN
GYIIVADRSNNRIQIFQENGTFVRKFGTQGSGPGQFDRPAGVATDSQSHIVVADKDNHRI
QILTIEGLFLHTFGEKGSRPGQFNYPWDVAVNSEGQIVVSDTRNHRIQLFTHQGVYLGKF
GFENTTGPSKHFDSPRGVAFSPEGNIIVTDFNNHRLVVIPPNLGTARFLGGEGTGSKQFL
RPQGVVVDDDGHIIVADSRNHRIQIFEPSGELMWRIGSSGKAPGELDRPAGITLTPNGAI
VVVDFGNNRIQIF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacgaagtagtttgagtcccacgtggacatttccttctcgtaatagtcctggg
tgggtcaccagggaggtctgtggcaactgcaatcaatcgagttccaggaatgttccccaa
gtggtggcaaagtgtctagattgcacgtaccttctttgccaaccatgtctgatggctcat
caaaggggtcgtctgacaagaaatcacggaattcaacttgacacaagaagcaatacacca
agtccatcttcagctgttacctcttactcaaccccaccaacaattaccttctattgcgat
gttcatcgggaaattataaaactttactgcgagccttgtgaagtggtattatgtgaagta
tgcgtaaacaaggatcacaggggtcattttgtgtaccaattgtggagggctactagaggt
ggtgaatttactccgctccatatattgaatgaaatttgcagtgcaatctcaaacattcta
cgagggattgaactagtcgagcatactcacgaaaatatggagagatgggtgattcagaca
gacccttttttgaggataaggatctctgaagggtttcctatacattgtgaagagcaagag
aaattgctgactgcaattcagagaataaagctgatgagagacgaaagactagagcgaact
ttgggtatcaaggaaacgggtgccaaagaggtgcttcagattcgtcaatatcagaattct
gtagtacccagggacgacgactggatgtcattcctagattcaaatatcaatttggtaaat
tcattcgcctccgtgggaccagtcacttttggaaatccaggccccataggagatcgtcga
tctgttagaggtcggacagcggcaatagaaactcccatgggcagtagtaggatagtatcc
aacttcccacggcatgtcatacctcgtggtagacctgtgctaggatgcgatcttgtcgta
tctttgaaaatcaatcgcagtttaaattctatgggactaagaacagttgctatttgtggt
tcagaagggaacaaagatggagagttatgcagaccctggggtgtttgctgcgacaagaat
ggatatatcatcgtagcagacagatcgaataatcgtattcaaatttttcaagaaaatggt
actttcgtaagaaaatttggtacccagggctctggtccgggtcaatttgatcgacccgcc
ggtgtagctacagactcgcaaagccacattgtggttgctgacaaagataaccatagaatt
caaattcttaccatcgaaggactatttctacatacatttggtgaaaagggctctaggcca
ggccaattcaattacccttgggatgtggctgttaattctgaaggccaaatagttgtctct
gacacacgaaatcatcgtattcaactattcacacaccaaggtgtatatttaggaaagttt
ggcttcgaaaataccactggtccttcaaagcactttgattcgcctcgaggtgttgctttc
tctccagagggcaacataattgtaaccgacttcaacaatcaccggctagtcgttattccg
ccgaacttgggaaccgcaaggttcttaggtggggaaggtactggttcaaagcaattcttg
agaccacagggtgttgtggtagacgacgacgggcacatcatagttgcagattctagaaat
cacaggatacagatatttgagccgtcaggagagttaatgtggaggataggaagttcgggt
aaagcacctggtgaactcgatagacccgcgggcataacattaacacccaatggagcaata
gttgtcgttgacttcggtaacaacagaattcaaatattctag
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