Neodiprion virginianus: 124306309 Help Entry 124306309         CDS       T09046                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism nvg  Neodiprion virginianus Pathway nvg03030   DNA replication nvg03410   Base excision repair nvg03420   Nucleotide excision repair nvg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nvg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     124306309    03410 Base excision repair     124306309    03420 Nucleotide excision repair     124306309    03430 Mismatch repair     124306309  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:nvg03032]     124306309    03400 DNA repair and recombination proteins [BR:nvg03400]     124306309 Enzymes [BR:nvg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      124306309     6.5.1.6  DNA ligase (ATP or NAD+)      124306309     6.5.1.7  DNA ligase (ATP, ADP or GTP)      124306309 DNA replication proteins [BR:nvg03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     124306309  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      124306309 DNA repair and recombination proteins [BR:nvg03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      124306309    NER (nucleotide excision repair)     Other NER factors      124306309    MMR (mismatch excision repair)     Other MMR factors      124306309 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  124306309 NCBI-ProteinID:  XP_046622815 EnsemblRapid:  ENSNVRG00000013959 LinkDB All DBs Position 5:984023..989358 Genome browser AA seq 916 aa AA seqDB search MLKFNVIFTLFKSRTIILEQPVISLTRLLDSNGVSCSSFNWLHIGNSLSKKKDDDDSPSV AKRKRVDSSNGTESISPPPAKKISTSVNDAPSTSSSQKSPGSIQRRQIGKENENKTVVKD EDVKKTTPKRTTTKNDNRNSKNKINQSAKKRARIIPQDDSSDDDVHLALPDSPIKPDAKA FLKSPVKTEMESEDDISPKSKHASEEEEAESPKKAKVEKPKASPATKKSPKNVHSFFAVK QKNGSKPEEKKTSNGSAKTQTYSYNPGASKYHPIDDASWKQNEKVPYIALARTLEIIEST SARLKMIEFLSNYLRSVIVLSPDDFLASVYLCLNQLGPAYEGMELGIAETTLMRAIAQCT GRTVAQIKSDVQEVGDLGIVAEESRSNQRMMFQPAPLTVSGVFNKLKEISQMTGQASMTK KVDKIQSLFVACRFSEARYFIRSLSGKLRIGLAEQSILQAIALACATTPPGQDYPPKILD ASEKRSAESFKQDYDKKALILKTTYCECPNYDLIIPVILKEGIKALPERCKLTPGIPLKP MLAHPTKGVQEVLTRFDGLKFTCEWKYDGERAQIHIAENNHVSIYSRNQENNTSKYPDII GRLGNTRGENVKSCVLDCEAVAWDRENEQILPFQVLSTRKRKDASEANIKVQVCVFMFDL LYLNGTSLVKEPFIKRRELLKENFKEVKGEWQFATSLDTTTMEEVQDFLDESVKGNCEGL MVKTLEQDATYEIAKRSRNWLKLKKDYLDGVGDTLDVVVIGGYIGKGKRTGTYGGFLLAC YDQENEEYQSICKIGTGFSDEDLQTHTEFLKKHVISQPKSYYRYDVSHEPDHWFEPVQVW EIKCADLSLSPVHRAAAGIIDPEKGISLRFPRFIGIRNDKNCEDATSSQQVADLYNNQEH IKNQTSTTKVAEEDFY NT seq 2751 nt NT seq  +upstreamnt  +downstreamnt atgctcaagtttaacgtgattttcacgctgtttaaatctcgtaccattatcctcgagcaa ccggttatctcgttaacacgactgctagatagtaacggtgtatcgtgttcttcattcaat tggttacatatcggtaatagtttgtccaagaagaaagatgacgacgacagtccttcagtt gctaaaaggaaacgagtggacagttctaatggcactgaatctataagcccgccacctgcg aaaaaaatcagtactagtgtcaacgatgcaccatctacctcatcgtcacaaaaatcgcct ggatcaattcagcgtagacaaataggaaaagaaaatgagaacaaaactgttgtcaaagat gaggatgtcaagaaaactacacccaagagaaccacgacaaaaaatgataatcgtaattct aaaaacaaaattaatcagagtgccaaaaaacgagcgagaataatccctcaggatgattct agtgacgacgacgttcacttggcactcccagatagtccaattaaaccagatgctaaagca tttctgaaaagtcctgttaaaacagagatggaatcagaggatgatatatctccaaaaagt aagcatgcctcggaagaggaagaagcagaaagtcctaagaaagcaaaagtggaaaagcca aaagcctcgccagcgactaaaaagtctcccaaaaatgttcatagtttctttgcggtaaag cagaagaacggttcaaaacctgaagagaagaaaactagtaatggtagcgccaaaacacag acttattcgtataacccaggtgcgtcaaaatatcacccgatcgacgacgctagttggaaa cagaatgaaaaagtaccgtacatcgcattggctcgcactttggaaattattgaaagcact agtgcgaggctgaaaatgattgaatttctctcaaattatttgcgatccgtcattgttctc agccctgatgatttcctagccagtgtttatctttgtttgaatcaactgggcccagcctac gaaggcatggagttgggaatagccgagaccacacttatgagagcaattgcacagtgtacc ggcagaactgttgcacagattaaatctgacgtccaagaagtcggagacttgggaatagta gctgaagaaagtcgctctaatcagcgaatgatgtttcagccggcacctctgactgtttct ggtgtgtttaataaattgaaagaaatctcacagatgacaggacaagcctccatgaccaaa aaggttgacaagattcaatctctgtttgtcgcatgtcgtttttctgaggcaagatacttt atacgttctttatctggaaaattgagaataggtctggctgagcagtctatcttacaggca atagctttggcctgtgccacaactccacctggtcaggattatcctccaaagattttggat gctagtgaaaaaagatctgccgagtcattcaaacaggattacgataaaaaagccctgata cttaaaactacatactgtgaatgtccgaattacgatctcataattcctgttatactaaag gaaggcataaaagctttaccagagcgatgtaaattaactcctggcattccacttaagcct atgctggcacacccaacgaaaggtgttcaagaagtcttgacaagattcgacggactgaaa tttacttgtgaatggaaatatgatggcgaaagagcgcagattcatattgctgagaacaat cacgtgtcaatttacagcagaaatcaagaaaataataccagtaaatatccggacattatt ggaagattgggcaatacacgtggggaaaacgttaaaagttgtgtattggattgcgaagcg gttgcttgggacagagaaaatgagcagattctgccattccaagtgttaagcacgaggaaa cggaaggatgcaagtgaggcgaatatcaaagtacaggtttgtgttttcatgtttgatctg ctctatttgaacggcacatcactggtgaaggaacccttcataaaacgtagagaattgctg aaagaaaatttcaaggaagttaagggggaatggcaattcgcaacaagtcttgatacaacg actatggaagaggtccaagactttctagatgaatctgtaaaaggaaactgcgagggtttg atggtaaaaacattggagcaagatgcaacgtatgagatagctaaaagatctcgcaactgg ttgaagttgaaaaaggattatttagatggggtgggagatacgctggacgtagtagtgatc ggaggttacattggaaagggaaagaggactggtacttatggggggtttttattggcttgt tatgaccaagagaatgaagagtatcaaagcatctgtaagattggcactgggttcagtgac gaagatcttcaaacgcatacagaattcttaaagaagcatgtaatctcgcagcctaaatct tactaccgatatgacgttagccatgaacctgaccactggttcgaacctgtccaagtttgg gaaataaaatgtgccgatctctccctctcacctgtacacagagctgccgctggcattatt gatccagagaagggtatatctctgcggtttccgcgatttataggtatacgtaatgacaaa aattgcgaggatgcaacatcatctcaacaagttgctgatttgtacaataaccaggaacat attaaaaatcaaacgagtacgacaaaggttgctgaagaagatttttactag

DBGET integrated database retrieval system