KEGG   Nasonia vitripennis (jewel wasp): 100116051
Entry
100116051         CDS       T01081                                 
Symbol
Rpd3
Name
(RefSeq) Rpd3 histone deacetylase
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nvi  Nasonia vitripennis (jewel wasp)
Pathway
nvi03082  ATP-dependent chromatin remodeling
nvi03083  Polycomb repressive complex
nvi04213  Longevity regulating pathway - multiple species
nvi04330  Notch signaling pathway
nvi04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:nvi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100116051 (Rpd3)
   03083 Polycomb repressive complex
    100116051 (Rpd3)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100116051 (Rpd3)
   04350 TGF-beta signaling pathway
    100116051 (Rpd3)
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    100116051 (Rpd3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nvi03036]
    100116051 (Rpd3)
Enzymes [BR:nvi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100116051 (Rpd3)
Chromosome and associated proteins [BR:nvi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100116051 (Rpd3)
   HDAC complexes
    Sin3A-HDAC complex
     100116051 (Rpd3)
    BRAF-HDAC complex
     100116051 (Rpd3)
    REST complex
     100116051 (Rpd3)
    SHIP complex
     100116051 (Rpd3)
    MiDAC complex
     100116051 (Rpd3)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100116051 (Rpd3)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100116051 (Rpd3)
  Chromatin remodeling factors
   NuRD complex
    100116051 (Rpd3)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 100116051
NCBI-ProteinID: NP_001161325
NASONIABASE: NV18066
UniProt: A0A7M6UDB5
LinkDB
Position
1:complement(16926292..16930645)
AA seq 492 aa
MSQLQHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDSYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEADEKVNPDERLPQRDIDKRLQHENE
FSDSEDEGEGGRRDNRSFKGSRKRPRLEKGQENAEGDVKKEDEIKSEVKENEKDEKSNST
NEETKKDGGANP
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtcccagttacagcatagccgcaagcgagtctgttattactacgacagcgatattggc
aactattactatggacaaggtcatccaatgaaaccacaccgcataaggatgacacataat
ttattattaaactatggactctatcgtaaaatggaaatttatcgaccacataaagctact
gccgatgaaatgactaagtttcatagtgatgaatatattagatttttaaggtcaatcagg
cctgataatatgactgaatacaacaaacaaatgcaaagatttaatgttggtgaggattgt
cccgtttttgatggtctctatgagttttgtcaattatctgctggtggatcagtagctgca
gctgtaaaattgaataagcaagcttctgaaatttgcattaactggggtggaggacttcat
cacgcgaaaaaaagtgaagcctcaggtttctgctatgttaatgatatagtgcttggcatt
ttagagttacttaaataccatcaaagagttttgtatattgatattgatgtccatcatggt
gatggagtcgaagaagccttctatacaacagatagagtaatgacagtttcattccataaa
tatggagaatatttccctggaactggtgatctcagagacattggcgctggaaagggaaaa
tattatgctgtcaatattcctcttagagatggcatggacgatgatagttatgagtctata
tttgtaccaataatttctaaagtgatggaaactttccagccatcagctgttgtacttcaa
tgtggagctgattctttgactggagacagattaggttgttttaatctcactgtaagaggg
catggaaagtgtgttgagtttgtgaagaaatacaacttgcctttcttaatggttggtggt
ggtggctacacaattaggaatgtttcaagatgctggacatatgaaacctcggtagcgctt
ggttcagagatagcaaatgaactaccatacaatgactattttgaatactttggaccagat
ttcaaattacacattagtccatcaaatatggcaaatcagaatactcctgaatatttagaa
aaaatcaaaactagattatttgaaaatcttaggatgttgcctcatgcgccaggagttcaa
gtacaagctattccagaagacggtgccgtcattgaagactctgaagctgatgagaaagta
aatcccgatgaaagacttcctcagcgcgacattgacaaaaggttacaacatgaaaatgaa
ttcagtgatagtgaagatgaaggtgaaggtggcagaagggataacagatcttttaagggt
tcaaggaaacgaccacgattagaaaagggtcaagaaaatgcagagggtgacgttaaaaaa
gaagacgaaatcaaatccgaagtgaaagaaaatgaaaaagatgagaaatcaaattctact
aatgaagaaactaaaaaagatggaggagcaaatccctga

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