Nasonia vitripennis (jewel wasp): 100116051
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Entry
100116051 CDS
T01081
Symbol
Rpd3
Name
(RefSeq) Rpd3 histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03082
ATP-dependent chromatin remodeling
nvi03083
Polycomb repressive complex
nvi04213
Longevity regulating pathway - multiple species
nvi04330
Notch signaling pathway
nvi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100116051 (Rpd3)
03083 Polycomb repressive complex
100116051 (Rpd3)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100116051 (Rpd3)
04350 TGF-beta signaling pathway
100116051 (Rpd3)
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
100116051 (Rpd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvi03036
]
100116051 (Rpd3)
Enzymes [BR:
nvi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100116051 (Rpd3)
Chromosome and associated proteins [BR:
nvi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100116051 (Rpd3)
HDAC complexes
Sin3A-HDAC complex
100116051 (Rpd3)
BRAF-HDAC complex
100116051 (Rpd3)
REST complex
100116051 (Rpd3)
SHIP complex
100116051 (Rpd3)
MiDAC complex
100116051 (Rpd3)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100116051 (Rpd3)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100116051 (Rpd3)
Chromatin remodeling factors
NuRD complex
100116051 (Rpd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100116051
NCBI-ProteinID:
NP_001161325
NASONIABASE:
NV18066
UniProt:
A0A7M6UDB5
LinkDB
All DBs
Position
1:complement(16926292..16930645)
Genome browser
AA seq
492 aa
AA seq
DB search
MSQLQHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDSYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEADEKVNPDERLPQRDIDKRLQHENE
FSDSEDEGEGGRRDNRSFKGSRKRPRLEKGQENAEGDVKKEDEIKSEVKENEKDEKSNST
NEETKKDGGANP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttacagcatagccgcaagcgagtctgttattactacgacagcgatattggc
aactattactatggacaaggtcatccaatgaaaccacaccgcataaggatgacacataat
ttattattaaactatggactctatcgtaaaatggaaatttatcgaccacataaagctact
gccgatgaaatgactaagtttcatagtgatgaatatattagatttttaaggtcaatcagg
cctgataatatgactgaatacaacaaacaaatgcaaagatttaatgttggtgaggattgt
cccgtttttgatggtctctatgagttttgtcaattatctgctggtggatcagtagctgca
gctgtaaaattgaataagcaagcttctgaaatttgcattaactggggtggaggacttcat
cacgcgaaaaaaagtgaagcctcaggtttctgctatgttaatgatatagtgcttggcatt
ttagagttacttaaataccatcaaagagttttgtatattgatattgatgtccatcatggt
gatggagtcgaagaagccttctatacaacagatagagtaatgacagtttcattccataaa
tatggagaatatttccctggaactggtgatctcagagacattggcgctggaaagggaaaa
tattatgctgtcaatattcctcttagagatggcatggacgatgatagttatgagtctata
tttgtaccaataatttctaaagtgatggaaactttccagccatcagctgttgtacttcaa
tgtggagctgattctttgactggagacagattaggttgttttaatctcactgtaagaggg
catggaaagtgtgttgagtttgtgaagaaatacaacttgcctttcttaatggttggtggt
ggtggctacacaattaggaatgtttcaagatgctggacatatgaaacctcggtagcgctt
ggttcagagatagcaaatgaactaccatacaatgactattttgaatactttggaccagat
ttcaaattacacattagtccatcaaatatggcaaatcagaatactcctgaatatttagaa
aaaatcaaaactagattatttgaaaatcttaggatgttgcctcatgcgccaggagttcaa
gtacaagctattccagaagacggtgccgtcattgaagactctgaagctgatgagaaagta
aatcccgatgaaagacttcctcagcgcgacattgacaaaaggttacaacatgaaaatgaa
ttcagtgatagtgaagatgaaggtgaaggtggcagaagggataacagatcttttaagggt
tcaaggaaacgaccacgattagaaaagggtcaagaaaatgcagagggtgacgttaaaaaa
gaagacgaaatcaaatccgaagtgaaagaaaatgaaaaagatgagaaatcaaattctact
aatgaagaaactaaaaaagatggaggagcaaatccctga
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