Nasonia vitripennis (jewel wasp): 100121739
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Entry
100121739 CDS
T01081
Name
(RefSeq) uncharacterized protein LOC100121739 isoform X5
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100121739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvi03021
]
100121739
03019 Messenger RNA biogenesis [BR:
nvi03019
]
100121739
Transcription machinery [BR:
nvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100121739
Messenger RNA biogenesis [BR:
nvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100121739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_helical
CID
CFIA_Pcf11
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
100121739
NCBI-ProteinID:
XP_008210968
NASONIABASE:
NV16870
LinkDB
All DBs
Position
1:15926084..15939997
Genome browser
AA seq
1864 aa
AA seq
DB search
MKNRIKNKSLDYIEEGENCANMAGGNSIKEHKSDEIVKEYNSSLMDLTINSKPLINMLTL
LAEDYIDHANAIVEAIEAHLQKVSSEIKLPVLYLIDSIVKNVNRAYLGLFTKNIVNTFCS
VFEKVDENTRASMWKLRQTWSEVFPPKKLFALDVKVHNIDPAWPIAPLPANNVSAAKSIH
VNPKFLTTQQHQERAAKTVSIPPCSTKISAVPSVKSVSTSEAEMREKLLQKQKELIELQK
KKVELELLQAKASLEQQRQQLDKQSVQLPTLPDGALEKSVAAISAPSQVLKPIEKQLPAA
AASLLKIDSNKSSVKIAPASSVAVASAKSVASRDPRLKMVASSATNSSLSPEELAKQQQL
MHQLQLHIQSKLSGEQKQSSLLNNPVIKTSSDSELHNNKSLDNKRAKDSSQKKEPTTTNI
TTSHRSNSIKDQSKSSSSKSSSSRGSSSSSSSKTSSSSSSSRKPGSKSRSKSSSSSSASP
NKVPKLEENSSLSPDKRSSSSSSTSSKKSKSRKTHSPSPVSSSTTTTSNGSSSQTSYRIP
RRAIAQEVTSSQVQTLAINCNNKSATSSGLDEEEKSGGSLIVSLAHLPATAAPTSFKEIR
ANTRMRNYVRRNKEGSRSPEVINHAKKDVVMPDASKDEDLRSPIVNVNVVAAGPAAALDT
KEDLDLRVLAVPNKRQSSEILESANPKKTKAEKFDALFGNEDVDLRTLTNPKAGRPPTPP
PPVISHEKSKDSWAKLKTPMKSDRDPPKPLSDNRNRDRLGRPRFFNKIGSSPEDQKDGRR
IRGLPMGRGDLDKHIERNADRNIEIIMKQAAEQLNQGQITKSQYNKLIQDVLHMSEDEKL
KAAQRKEQEIGMLVWEKDGPGGAQNFGNDENIRKDHSGIHPRISGPGGARWQNPWHQPWS
HGPPFPGGPHGFPSGPDGFRPMGPWQNHPRMFGGPMRPDFHPAFHPGGYNPRMGPPPMGP
NGPMMMSNGPMNQIGPMNSMGASMMMGNGPVRPDHAAKRNSPNLTGAAATNSGSVNSSNV
TTASATLETDKGALSAMKNSGELPPADPQVLEEIAKDTMKSINIDGVSREIRYYGNLGVV
FLSWDNPRDIGFQDGTRRIIIDGKDSIICSFNEDYKEFTYEGEIHRIKLGTPTRELYVDD
KWYECYFGGRPIMVDLGNKQVSMKLEGPPPQVKIGNTKRTDLVVGKINLIINARNMVPVF
LDSKPQMFEIEDRKFTLEFIDALQTVLLNGRPFKVEFGGLPKPILVGEKKHFIRFSVLPR
GFTAGYVKITGMKGEPAKESAAELAKQRAANKTMEETTTSIPAKAPSVTNLAQSMDMDTT
SQDGMDTTSGSKSSGLQLDVLSSVVPSAMAPSSGLSYQAEPVENLPVVAPLLATSVDLNT
LFQRLVETGIVPNLTETKKPEEEEKKEPEIISATFDKPETLRAKNAGVIAALYSGIQCSS
CGARFATEMAARYSHHLDWHFRQNRKEKDSTRKAHSRSWYYDQSDWIQFEEIEDLEDRAQ
SWFETEKQTAETDGAATEDNAADAQQPSVPTASDDDGFCQVCHEAFEQFYNEEKEEWHLR
PAVSFEEKNYHPLCLEDHKRALEKSALELEESITEMEEEVEGDNEENDDEKKEDLKDMEI
YIKEEKEDEDQIEDQDEDMKDENNEDEKPIIKTEKDDDEEKSSEPDNEEEKQQDMDVDDS
EPIEIIEPLPRKIELEEIDDSSDEENEDGTKKERPKITSAEKSEEKIPDDVPLIFENVKV
KEEPIDDDMPEAEESTIAEAAAVDTTQVAVKSSIDGNVELDSATPTIPTAPSKIKLNITK
TLVAPKETDESKKEEKKPAESPAEAAPAKPLIPAAIKPSLQGKKLSILPTVEKGHELSGL
CSIM
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatagaattaaaaacaaatcgttagattatatagaggaaggagagaattgtgca
aacatggccggaggcaacagtataaaagaacacaagtctgatgagattgtcaaggagtac
aactcatccctgatggatctcactattaacagtaaacctctgattaatatgcttacgctt
ttagcagaggattatattgaccatgccaacgccatagtagaagccattgaagcccacctg
cagaaggtgagcagcgagatcaaactaccagtactctacctcattgattcaattgtgaaa
aatgttaaccgggcctatctaggcctcttcacaaaaaatatagtgaataccttctgcagt
gtttttgaaaaggtggatgagaacacaagagccagcatgtggaagctacgtcaaacatgg
agtgaggtcttcccacctaaaaagttgtttgcgctggacgtgaaggttcacaatattgat
ccagcctggcccattgcaccattacctgccaacaacgtgtctgcagcaaaatctattcat
gtaaatcccaaatttcttactacgcaacaacaccaagagcgcgctgcaaaaacagtttca
ataccaccatgcagcacgaaaatttcagctgttccgtcggtcaagtccgtctcgacgtct
gaggcggagatgcgggagaaactgttgcagaagcagaaagagttgatcgagttacaaaaa
aagaaagttgagcttgagctactgcaggccaaggctagtctcgagcaacagcgacaacaa
ctcgataaacagagcgtgcaattgccaactttacccgatggtgccttagaaaagtcagtt
gcagccatttccgcgcctagtcaagtattgaagccgatagagaaacagttacccgctgca
gccgccagccttctcaaaatcgactcgaataaaagtagcgtcaagatagcgccggcgagc
agtgtagccgttgcttcagcgaagtctgttgcttctcgcgatcctcgcctgaagatggtt
gcctcttctgcgacaaatagcagcctcagccccgaggaactcgccaagcagcaacaactt
atgcatcaactgcagcttcacattcaatctaaactgagtggcgagcaaaaacaaagttcc
ttgttaaacaatccggtgataaagacgtcgagcgattccgaactccacaacaataaaagt
ctcgacaataaaagagcaaaagatagttcccaaaagaaagaacccaccaccacaaatatc
acaacctctcatcgtagtaatagcattaaagaccaatcgaagagctcttcatcaaagagt
tcttcgtcgcgtggtagtagttcctcctcatcctcgaaaacctcgtcctcttcttcttcc
tcgagaaaacccggtagcaagtctcgttcgaagtcgtcgtcatcttcctcggcatcgccc
aacaaagtacctaagcttgaggagaattcgtccctttcaccggacaaacgctcgtcctct
tcctcttctacctcttcgaaaaagtccaagtcccgcaagacccatagccccagcccagtt
tcttcctcgacgacgacgacgagcaacggctctagtagccaaacgtcttatcgcataccg
aggcgggctatcgctcaagaggtgacgtcaagccaagtacaaacactggctattaactgt
aataacaaatctgcaacatcttcgggtttggacgaagaggaaaaatcaggaggatcatta
atcgtatcgcttgcgcatctgcctgcgacagcggcgcccacaagcttcaaggagatcaga
gctaacacgagaatgaggaattacgtgaggagaaacaaggaaggcagccgcagccccgaa
gtcatcaatcatgcgaaaaaggatgtcgtcatgccagatgccagtaaagatgaagatttg
agatcaccaattgttaacgttaacgtcgtcgcagctggcccagccgctgctcttgatacg
aaagaagatttagatttgcgagttcttgctgttcctaataaaagacagtcatccgagatc
ctagaatcggcgaatccaaagaagacgaaggctgaaaagtttgatgcgctgtttggtaac
gaggatgtagatctgcgcactttaacaaacccgaaagccggtcgtccacctactcctccc
cctccggtcatttctcacgagaaaagcaaggacagctgggcaaaactgaagacccctatg
aaatctgatcgagacccacctaagcctttgtctgacaatcgcaatcgcgatcgtttgggc
cgaccgcgtttcttcaacaaaatcggcagctcgcccgaggaccaaaaagacggacgtcgc
atccgaggcttgccaatgggccgcggcgacctcgacaagcacatcgagcgcaatgccgac
agaaacatagaaatcatcatgaagcaagcggccgagcagttgaatcaaggtcagatcaca
aagtcccagtacaacaagctcatccaggacgtgttgcacatgagcgaggacgagaagctc
aaggcagctcaacgcaaggagcaggagattggcatgctcgtttgggagaaggacggacca
ggcggagcacagaacttcggcaacgacgagaacattcgtaaagaccattcgggaatacat
ccaagaatatcaggaccaggcggtgctaggtggcaaaatccttggcaccagccttggtct
cacggaccaccattccctggtggtccccatggattccccagtggacccgatggttttagg
cccatgggaccttggcagaaccatccgaggatgttcggcggacccatgaggcccgatttc
cacccagccttccaccctggaggttacaacccgagaatgggcccaccaccgatgggaccc
aacggacctatgatgatgtccaacggtccaatgaatcagataggacctatgaactctatg
ggtgccagtatgatgatgggcaacgggcctgtgagacctgatcatgcggcgaaacggaac
tcgccgaacctaactggtgctgctgcaacgaatagcggtagtgtcaactcgtcgaacgtg
accactgctagtgctacattagagactgataaaggcgctttaagcgcgatgaaaaacagt
ggtgaattgccccccgctgaccctcaagttcttgaggaaattgcgaaggatacaatgaaa
tcgatcaacatagatggtgtatctagagaaattaggtactacggaaaccttggtgttgta
ttcctaagttgggataacccgcgagacatcggtttccaagacggaaccagacgaatcata
attgatggaaaggactcaattatatgcagttttaatgaagattacaaagaattcacgtac
gaaggagaaattcacagaattaaacttggcactccaacaagggaactgtacgtggatgac
aagtggtacgaatgctactttggcggacgtccgattatggttgacctcggtaacaaacaa
gtcagtatgaagttagaaggacctcctccgcaagtgaaaatcggtaatacgaagcgcaca
gatcttgtcgtaggaaaaatcaatcttataatcaacgcaagaaacatggttccagtcttc
cttgattccaaacctcaaatgttcgagatcgaagataggaaattcactctagaatttatt
gacgctcttcaaactgtcttgctaaatggtcgtccatttaaagtagagtttggcggatta
cctaaaccgattctcgttggcgagaaaaagcattttattcgattctctgtattaccacgt
ggttttacggccggttacgttaaaatcactggtatgaagggtgaacctgcaaaagaatct
gcggccgaactagccaaacaacgagcagccaacaagaccatggaggaaacaaccacgtcg
attcccgctaaagcaccatcagtgacgaatttggcccagtccatggacatggacacaacg
tcgcaggatggtatggataccacatctggttccaaatcatcaggtttgcaattggatgta
ctgtcatcggttgtgccttcagctatggctccgtcctctggattatcgtaccaagctgag
cccgttgaaaacctgccagtggtggcaccgcttctggctacgtcggttgatcttaacacg
ctgtttcagagattagtggaaacgggtatagttccaaacctcactgaaacgaaaaaaccc
gaggaagaagaaaagaaagagccggagatcatttcagcgacattcgataaaccagagaca
ctaagagcaaaaaatgcgggcgtaatcgctgcgctttatagtggtatacaatgcagctcg
tgcggtgcgaggtttgctacagaaatggctgctcgttatagtcaccatttagattggcac
tttaggcagaatcgcaaggaaaaagattcgacaagaaaagcacattctaggtcgtggtat
tacgatcaaagcgactggattcagttcgaggaaattgaggatcttgaagatagagcgcaa
agttggtttgaaaccgaaaagcaaacagcagaaaccgatggcgctgctaccgaagacaat
gccgcagacgcgcaacaacctagtgttccgacggcctctgacgatgatggtttctgccaa
gtatgtcacgaggcattcgagcagttctataatgaggagaaagaagaatggcacctcagg
ccggctgtttctttcgaggaaaagaactaccatccactctgtctcgaagatcataagaga
gcgttggaaaagtcagctttggagctagaggaaagcataactgaaatggaagaagaggtt
gaaggagataacgaagagaacgatgacgaaaaaaaggaggatttgaaggatatggaaatc
tatataaaggaagaaaaagaagatgaagaccaaattgaagatcaagatgaagatatgaag
gacgaaaataacgaagatgagaaaccaattattaaaacagaaaaagatgatgatgaagaa
aaatcatcagaaccagacaatgaagaagagaagcaacaagacatggatgtagatgattca
gagcccatagaaattatagaaccactgccaagaaaaatagagctagaagaaattgacgat
tcttctgatgaggagaatgaagatggcacaaagaaagaacgtcccaagatcacatctgct
gaaaaatccgaagaaaaaatcccggatgatgtgcccctgattttcgaaaacgtcaaagtc
aaagaagaaccgattgatgatgatatgccagaagccgaagaaagcaccattgctgaagct
gcagcagtagacacaacgcaggttgcagtgaagagttcaattgacggcaatgtagagttg
gattcagcaacaccaacaatacctactgcgccttccaaaattaagctcaatattaccaag
actttggtagctccgaaagaaacggacgaatcgaagaaagaggaaaagaaaccagccgag
agtcccgcagaagctgcaccagcaaagcctctgatacccgcggcgatcaagccttcgtta
caaggcaagaaactgtcgatacttcctacggtagaaaaaggtcacgaactctcagggctc
tgctcgattatgtaa
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