Nitrososphaera viennensis: NVIE_010450
Help
Entry
NVIE_010450 CDS
T03200
Name
(GenBank) exported or cell surface associated protein of unknown function containing glycoside hydrolase/deacetylase and HYR-domains
Organism
nvn
Nitrososphaera viennensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHB_HEX_C_1
Fn3_assoc
Polysacc_deac_1
CHB_HEX_C
HYR
DUF2334
Big_13
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
AIC15270
UniProt:
A0A060HIX8
LinkDB
All DBs
Position
complement(879063..883538)
Genome browser
AA seq
1491 aa
AA seq
DB search
MTPGTCLSTARLTRHLAFALIATMMIIAVVVNAPIRASALSVDACNCVIFRLDDIQDFWL
VPVQSAIIDKFIERNENLDLGVIMNFVGNDPAIVNKVRQGVATGLIETVLHGWNHVPYDT
LSLQEQHDTLQMANAKLQDLFGRKTTIFIPPYNAYNEDTLEATSQLGLKIISSEFDQELP
SIYDPDDPNSPNNKVYKAIAGSDIKDQFGVYHLPQVVGYYTYDSEPPTKTPLSFIQSQIN
DTIANYGYAVITLHPQDFTVKDANGNPTPVLSQEEMNDLDALITWIGDQEYHIRTFSSVT
NVPLPPIIDNIPPNITAPADKAVVSTSELTPVDLGTPAVSDNVDTSPTVTNDAPAGGFPQ
GLTVVTWTATDDAGNGATANQYVMVSSTADTVRPTVSVSNPVAGTAVSGPAAGVNILVEG
TASDGQSGVKIVEVRPNNGGYKPAKQKSPGSWSEWSFVLNIKQSGNREVVARSTDFFGNM
QWAVIPITVSLSGPDTVAPQLTPPPDITVEAVGNITAVNLGAPVVFDNSDPAPVVKNDSP
GATESTGFPLGTTVVTWTATDASGNSATAEQRVTVVDTSSPGIPELLSPSDGMATSNGAI
TFSWSQVTDATSGTAYDLLVSSSPDFSPAVIDQQGLTGLSYTLATPLADGTYYWKVRSSD
ELGNASPYSPARTVTVDTLAPAVAASPPGGTYSSARSVTLTASEPGATIYYTIDGSVPTT
GSTVYSSPVSISINTSLKFFAVDPAGNGGQVATESYVFASVSASPPGGVYNAPQSVTLSS
GVPGSTIYYTTDGSTPTTGSTVYTAPIAISANTTLRFFDVDGGGNAGSVVTEAYAFDTVA
PTVTATPPGGTYSAAQSVALAASEPAMIYYTTDGSVPTTSSTVYTAPIAISADTILRFFG
VDSAGNAGSTVTAEYIIDTVLPTVTADPAGGLYNAAISVTLTASEPGATIYYTTDGSVPT
TGSTVYTAPISLSANTDLKFFAKDAVGNTGAVGSQTYLFDLQVPTVIASPTGGVFTSPQS
VTLIASEPATVYYTTDGTDPTTSSPVYSSPISIAATATLKFFARDGAGNSGPIGTETYSI
NASTLPATHMSDTTATFGQSMYSAQQAHAEFVSPASQLVGKTIDEITLKLRKTGAPTGTA
QVGVFNTDLTVKKLFGEKDTTTISSTYTDYVFSLTGSDVYVIQSGDRIGIKYAGGDASNF
VAVMLDQDGVDPFDGTNTYRQVYTSSWLNSLPNDLYMTLRQTHAGADILPPTVTASPPGG
AFPAAPSVTLSADETATIYYTLDGSTPTQSSSVYSSPITVSSGTTLRFFAKDTAGNIGSI
KTEIYTVDPSLLPATYMSDTTATSGQSTYSAQQAHTEFVTPSSQLIGKSIDQITLKLRKT
GVPTGIAEIGIFNTDLTVKKLFGTQNASAITSTYTDYVFSLTGSELYTIQSGDRIGIKYA
GGDASNFVAVMLDRDAADPFDGTNTYRQVYTSSWLSSTSDDLYMILKQTHG
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgactccgggtacttgcttgtcaaccgccagattgacaaggcatctggcgtttgccttg
attgcaacaatgatgattatagctgtcgtcgtaaacgcgccaatacgcgcaagtgccctg
tctgttgacgcatgcaactgtgtgatatttcgccttgacgacatccaggacttctggctc
gtccctgtgcaaagcgccatcatcgacaagttcatcgagagaaacgagaaccttgacctc
ggcgtgataatgaactttgtcggaaacgatcctgccatagtaaacaaagtaagacagggc
gtggcgacgggcttgattgaaacggtgctgcacggatggaaccacgtgccttacgacacg
ctttctttgcaggagcagcatgacaccttgcagatggccaatgcaaagctgcaggacctg
tttgggaggaagaccacgatattcataccgccgtacaacgcgtacaacgaggatacgctt
gaggcaacaagccagctgggactaaagatcataagctccgagtttgaccaggaactccca
agcatatacgacccggacgacccaaacagcccaaacaacaaggtctacaaggcaatagcc
ggctctgacatcaaggaccagtttggcgtgtaccaccttccgcaggtggtgggctactat
acctacgattccgagccgcctacaaagaccccgctttcttttatccaaagccagattaac
gacacaattgccaactatggctatgcagtgataacactccacccgcaggatttcacggta
aaggacgcaaacggcaatccgacgcctgtcctctcgcaggaagagatgaacgaccttgac
gccctgataacttggattggcgaccaggaataccacataaggactttttccagcgtgacc
aacgttccgctgcctccgattatagacaacatccctccgaacataacggcgcctgcggac
aaggcagtcgtctctacatcggagctgacccctgtcgaccttgggactcctgccgtatca
gacaacgtggataccagcccgacggtgaccaacgacgctcctgccggaggctttccgcag
ggcctgacagtggtgacctggacggctaccgacgacgcaggcaacggtgcaactgcaaac
cagtacgtgatggtgtcttccaccgcagacactgtcaggcccaccgtcagcgtcagcaac
cccgtggccgggaccgcagtcagcgggcctgccgccggggtaaatattctggtggaaggg
acagcctctgatggacagtctggcgtcaagatagttgaagtgcgcccgaacaatggcgga
tacaagcccgccaaacaaaagtcgccgggcagctggtccgaatggtccttcgtgctgaac
ataaagcagtcgggcaacagagaagtcgttgcaaggtcgacagactttttcggcaacatg
cagtgggccgtaatcccgattactgtttcgctgagcggacctgataccgtggccccgcag
ctgacgcctcctccagacattaccgtggaggcggtagggaacatcacggcagtgaacctg
ggagcgcccgtggtgtttgacaattccgatcccgcgcccgtagtaaagaatgactctccc
ggtgcaaccgagtcgacaggctttccgcttgggaccaccgtcgtaacgtggactgctaca
gacgcgtcaggcaattccgcgactgcagagcagcgagtcaccgtagtggatacgtcgtcg
cctggaatccccgaactgctttcgccatctgacgggatggcgacaagcaacggagccata
acgttcagctggtcgcaagtcactgacgccacgtcgggcaccgcttatgaccttctcgta
tcttcaagccctgacttttcgcctgccgtgatagaccagcagggcctgacggggttgagc
tacacgctcgctaccccgctagctgacggcacgtactactggaaggtcaggtcgtcagac
gagctgggcaacgcaagcccgtacagcccggcccggacagttacggtagacacgcttgct
ccagccgtcgccgcatcgccgcctggcggaacctactcatctgcccggtcggtaactctg
actgcaagcgagccgggagcaacaatatactacaccatcgacggcagcgtgccgactacg
ggcagcaccgtgtacagctcgccggtgtccatatccataaacaccagcctaaagttcttt
gcggtcgaccctgcaggcaacggcggccaggtggcaaccgagtcgtacgtctttgcaagc
gtttctgcttccccgccgggaggggtgtacaacgcaccgcaatccgtgacactctcaagc
ggtgtgccgggctcgactatctactacaccacagacggcagcacaccgactacaggcagc
accgtctacaccgcgccaatcgcgatatctgcaaacaccacgttgagattctttgacgtg
gatggcggaggaaacgctggctctgtcgtgacagaggcgtacgcctttgacactgtggct
ccgaccgtgacggccacgccgcctggcgggacatactctgccgcccagtccgtggccttg
gccgcaagcgagcctgcaatgatatactataccaccgacggctctgtacctacaacgtct
agcaccgtctacaccgcgccaatcgcgatatctgctgacaccatactccggttctttgga
gtggacagcgcaggcaatgccggctcgacggtaaccgcagaatatatcatagacaccgtc
ctgcccacagtgactgccgaccctgcaggaggtctgtacaacgcggcgataagcgtaact
ctgactgcaagcgagccgggagcaacaatatactacaccacagacgggagcgtgccgact
acgggcagcaccgtctacaccgcgccaatctcgctgtctgcaaacactgatctaaagttc
tttgcaaaagacgccgtcggcaacaccggcgcggtagggtcgcagacgtacctctttgac
ctgcaagtgccgactgtcattgcttcgccgaccggcggggtctttacgtcgccgcagtcg
gtaacgctgatagcaagcgagcctgccaccgtctactacacgacggacgggaccgacccg
accacgtcaagcccggtgtactcgtcgccgatcagcatcgccgctactgccacgctaaag
ttctttgcgagggatggcgcagggaactctggaccgattggcactgaaacctacagcatc
aatgcctcaacgctccctgccacccacatgtcagacactactgcaacctttggacagagc
atgtactctgcgcagcaggcacacgcagaattcgtctcgccggcgtcccagcttgtgggc
aagaccatagacgagataacgctgaagctgagaaagacgggcgccccgacgggaacggcc
caagtcggcgtctttaacacagacctgacagtgaaaaagctgtttggcgaaaaggacact
accacgatctcctcgacctacacggactatgtcttttcgctgaccggctctgacgtctat
gtcatccagtccggcgacaggatagggataaagtacgcgggaggagacgccagcaacttt
gtcgcagttatgctcgaccaggatggagttgacccgtttgacggcacaaacacgtaccgg
caggtctacaccagttcgtggctcaactccttgccaaacgacctgtacatgaccctgcgg
cagacgcatgcaggcgcagacatactccctccgaccgtcacggcatcgccgccaggcggc
gctttccctgccgccccgtcagtaactctgtctgccgacgagactgcgaccatatactac
acgctggacggcagcacgccgacccagtcaagctccgtgtactcgtctccaatcaccgtc
tcctctggcaccacgctgaggttctttgcaaaagacactgcaggaaacattggctccatc
aagaccgaaatctataccgtcgacccctcgctgttgcctgcaacctacatgtccgacacc
actgcaacctctggccagagcacctactctgcccagcaggcgcacaccgagtttgtgacg
ccgtcctcgcagctgataggcaagagcatagaccagataaccctcaagctccgaaaaaca
ggcgtcccgacgggcattgcagagattggcatctttaacacagacctgacagtgaaaaag
ctgtttggcacccagaatgcttccgccatcacttcgacctacacggactatgtcttttcg
ctgaccggaagcgaactgtacaccatccagtccggcgacaggatagggataaagtacgcg
ggaggagacgccagcaactttgtcgcagtgatgcttgaccgcgatgcggcagacccgttt
gacggcacaaacacgtaccggcaggtctacaccagttcgtggctcagctctacatccgac
gacctgtacatgatactgaagcagacacatggatag
DBGET
integrated database retrieval system
