Neogale vison (American mink): 122897550
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Entry
122897550 CDS
T08764
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03013
Nucleocytoplasmic transport
nvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122897550 (UPF3B)
03015 mRNA surveillance pathway
122897550 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122897550 (UPF3B)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122897550 (UPF3B)
mRNA cycle factors
P-body specific factors
122897550 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
122897550
NCBI-ProteinID:
XP_044091732
LinkDB
All DBs
Position
X:29715775..29731991
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AA seq
483 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDSTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGEPKDEKPKRPEEESVRDYRERERDYERDQERIL
RERERLKRQEEERRRQKERYEKEKAFKRKEEELKKEKEALRDKGKKTESTESVSSSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAVEKKQESGISHRKEG
GEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcataggcctaaagagaagcgagtaaccctgttgactccccca
ggggccacaggcagcggcggtggggcttcgggcgactccaccaaaggggaagataagcag
gatcgaaataaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcaacttcaagagcatcttcagcctatgccggagcatgattatttt
gaatttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagtcgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaaggaaaagacaaagggaagaagagaggaggaaatggaaagaagaagaa
aaacgaaaaaggaaagacatagaaaagctgaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctactcaagaagccagaaaaaggagatgaaaaagaattagataaaagagaaaaa
gccaagaaactggacaaagagaatctgaatgatgaaagagccagtgggcagagttgtaca
ctgcccaagcgctctgatggtgaacctaaagatgaaaagcctaagaggcccgaagaggag
agtgtccgcgactaccgggagcgggagcgggactatgagcgagaccaagagcgcatcctg
cgggagagggagaggctgaagcggcaggaagaggagcgccgcaggcagaaggagcgctac
gagaaggagaaggcttttaaaagaaaggaagaagaattgaaaaaagagaaagaagccctt
cgggataaaggaaagaagactgaaagcacagaatcagtaagcagctcagaaaaaactgaa
aagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagcaatgcag
ctttaccaaccaggagctcgaagccgaaatcgactctgtccacctgatgacagcaccaag
tctggagattcagcagtagaaaaaaagcaggaaagtggtattagccatagaaaagaagga
ggagaggagtga
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