Neogale vison (American mink): 122902115
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Entry
122902115 CDS
T08764
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122902115 (PMS1)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122902115 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122902115
NCBI-ProteinID:
XP_044097084
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All DBs
Position
3:2841803..2928903
Genome browser
AA seq
1007 aa
AA seq
DB search
MERRSGCSDLPRRSSLVAVAVHDADRLAEAPRGPPATLRDGLFQASSVPCRRVWTETDAG
CAPATLLKARMKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFD
KIEVRDNGEGIKAIDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAECFFFI
FQVLITTRTASDNFSTQYVLDGSGHIISQKPSHLGQGTTVTALKLFKNLPVRKQFYSTTK
KCKDEIKKVQDLLISYGLLKPDLRIVFIHNKAVIWQKNRVSDHKMALMSVLGTGVMGNME
PFQYRAKESQIYLSGFLPKHDADHSLTSLSTPERSFIFINQRPIHQKDILKLIRHHYNLK
CLKEPTRLYPIFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGSLPST
DSYENNKTDVSSADIVVSNTTETDVLFNKMESSGNNYPNVDTSAIPFQNDVHNDKSGKNT
NYCLNHQIHVDDHYDDQYNSENSNIARNSRNTFQEIPVNNLSCEDVRKECSETCFVGSVK
HTQSENSNKSNSAGSGKNEEAAVPEKSLEICADDWSKGNTLKNSMGENIEPVKILVPRES
SACELNNKAYPSPEQKNLSEGSCNKKSNVLDNKSGQLTAYDLISNRVVRKPMSASALFIQ
DHRAQFLTENSKTNLEDTTVQIEELWKTLSEEKKLKYEEKATKDLERYNKQIKRATEQEL
QTSFKDGRKKIKPTSAWNLAQKHKLKTSLSNQPKLDELFQSQIEKKNQNIKIVQIPFSME
NLKKNFEKHKFDLEEKEELCLLHNLKFPDAWLITSKTEVMLLNPYRVEEALLFKRLIENH
KLPAEPLEKPIILTESLFNGSHYLEILCKMTTDDQRYSGSAYLSDPRLTANGFKIKWIPG
ISIAEDYLEIEEMANCLPFYGVMDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLS
RQLPMYLSKEDVQDIIYRMKDQFGNEIKGCVHGRPFFHHLTHIPEDT
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaggtcaggctgttcggatttacctcggagatccagcctcgtcgccgtggcc
gttcacgacgccgatcgcctcgcggaggcacctcgcgggcctccagcgactttgcgggac
ggtctcttccaggcgagttcggttccctgccggcgagtgtggacggagacggacgccggg
tgcgcgcccgctactctactaaaagctagaatgaaacagttgcctgcagcaacagtgcgc
ctcctttcaagttctcaaataatcacttcagtggtcagtgtggtgaaagagctcattgaa
aactccttggatgcaggtgccacaagcatagatgttaaactggagaactatggatttgat
aaaattgaggtacgagacaatggtgagggtatcaaggccattgatgcacctgtaatggca
gtgaaatactatacttcaaaaataaatagtcatgaagatcttgaaaatttgacaacttac
ggttttcgtggagaagccttgggatcaatttgttgtgtagctgagtgttttttttttata
ttccaggttttaattactacaaggacagcttccgataattttagcacccagtatgtttta
gatggcagcggccacataatttctcaaaaaccttcacatcttggtcaaggtacaactgta
actgctttaaaattgtttaagaatctccctgtaagaaagcagttctactcaactactaaa
aaatgtaaagatgaaattaaaaaggtccaggatctcctcataagctatggtttacttaag
cctgacttacggattgtttttatacataacaaggcagttatttggcagaaaaatagagta
tctgatcataagatggctctcatgtctgttctggggactggcgttatgggcaatatggaa
ccctttcagtaccgcgctaaagaatctcagatttatctaagtggatttcttccaaagcat
gatgcagaccactctttaacaagtctttcaaccccagaaaggagttttatctttataaac
caacgaccaatacatcaaaaagacatattaaagttaatccgacatcattacaatctgaag
tgcctaaaggaaccaactcgtttgtatcccattttctttctgaaaattgacgttcctaca
gctgatgtggacgtaaatttaacaccagataaaagtcaagtattattacagaataaggaa
tctgttttaattgctcttgaaaatctgatgacgacttgttatggatcactacctagtaca
gattcttacgaaaataataaaacagatgtttcctcagctgacatcgttgttagtaataca
acagaaacagatgtgctttttaataagatggaatcatctggaaataattatccaaatgtt
gatacttcagccattcctttccaaaatgatgtgcataatgataaatctgggaaaaatact
aattattgtttaaatcatcagatacatgttgatgaccattatgatgatcagtataatagt
gaaaattccaacattgctagaaacagtagaaatacatttcaagagatcccagtgaataat
ttatcttgtgaggatgtccggaaggaatgtagtgagacttgttttgtaggttccgttaag
catacccaatcagaaaatagcaataaaagcaatagcgctgggagtgggaaaaatgaggaa
gcagcagttcctgagaagtctttggaaatctgtgcagatgactggagcaagggaaataca
cttaaaaattcaatgggagaaaacattgaacctgtgaaaattttagtgcctcgagaaagt
tcggcatgtgaactcaataataaagcttatccaagccctgaacaaaagaatctcagtgaa
ggttcctgtaacaaaaaatcaaatgtgctagataacaaatctggacagcttacagcatat
gatttaattagcaatcgggtagtcagaaaacccatgtcagcaagcgccctttttattcaa
gatcatcgtgctcagtttctcacagaaaattctaagaccaatttggaggatacaacagta
caaattgaagaactgtggaagacattgagtgaagagaagaaactgaaatacgaagagaaa
gctactaaagatttggaacgatacaataagcaaatcaagagagccactgaacaggaatta
caaacatcatttaaggatggcagaaaaaagataaagcccaccagtgcatggaatttggca
cagaagcacaaattgaaaacttcattatctaatcagcctaaacttgatgagctctttcag
tcccaaattgaaaaaaagaaccaaaacattaaaatagttcagatccccttttctatggaa
aacttaaaaaaaaattttgagaaacataaatttgacttagaagagaaggaggaactttgc
ttgctccacaatctcaagtttcctgatgcgtggttaattacatccaaaacagaggtaatg
ctattaaatccttacagagtggaagaagccctgctatttaaaagacttattgagaatcat
aaacttcctgcagagccactggaaaagccaattatattaacagagagtctttttaatgga
tctcattatttagagattttatgtaaaatgaccacagatgatcagagatacagtggatca
gcttacctgtccgatcctcgtctaacagcaaatggtttcaagataaaatggataccaggc
atttccattgctgaagactacttggaaatagaagaaatggctaattgtctcccattctat
ggagtgatggacttaaaagaaattcttaatgctatattaaacaaaaatgcaaaggaagtt
tatgaatgtagacctcgcaaagtgataagctacttagagggagaagcagtgcgtctatct
agacagttgcccatgtacttatccaaagaggatgtccaagacattatctacagaatgaag
gaccaatttggaaatgaaattaaagggtgtgttcatggtcgcccattttttcatcattta
acccatattccagaagatacctga
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