Neogale vison (American mink): 122902996
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Entry
122902996 CDS
T08764
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03013
Nucleocytoplasmic transport
nvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122902996 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
122902996 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122902996 (THOC1)
03041 Spliceosome [BR:
nvs03041
]
122902996 (THOC1)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122902996 (THOC1)
Spliceosome [BR:
nvs03041
]
Complex C
Other components
EJC/TREX
122902996 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122902996 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
122902996
NCBI-ProteinID:
XP_044099245
LinkDB
All DBs
Position
3:complement(173309555..173362956)
Genome browser
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgcttttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggctctaaacaacaaaaatatcaagccattgttgagtaccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcactcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcctctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaacacattctattctgctgggaaaaactatttactacgtatgtgc
aatgacctcctgagaagattatcaaaatcccagaatacagtcttctgtggacgaattcag
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgttactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcacactgaggatagagaagaaggaatggatgtagaagaaggtgagatgggagacgat
gaagctccaacaacttgctccattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaagaagttctagctgtctttaagagttataaattagatgatactcag
gcctccaggaaaaaaatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgtcgacac
atcctgttgcaatatctcattttattccagtatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtg
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaatactgaggaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacgtcagacaccaagccaacaagagtagctcgcaagagaacagcaccagaa
gacttcctagggaaaggacccaacaaaaagattttgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcttgcaaatcagagacaagggaatacatg
ccaactttggaggaattttttgaagaagccattgaacaggcagaccctgagaacatggtt
gaaaatgaatacaaggctgtgaacaattcaaattatggttggagagccctgagactatta
gcacggagaagccctcacttcttccagccaaccaaccagcaatttaaaagtttgccagag
tatctcgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcgacgagacaaacctgtaacaggggaacaaatagaggtgtttgccagtaaa
ctaggcgagcaatggaagatcctggctccctacttggaaatgaaagactcggaaattaga
caaattgagtgtgacagcgaagacatgaagatgagagctaagcagctactggtcgcctgg
caagatcaggagggagtacatgcaacacctgagaatctgatgaacgcactgaataagtcc
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
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