Neogale vison (American mink): 122903076
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Entry
122903076 CDS
T08764
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvs03009
]
122903076 (DDX55)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122903076 (DDX55)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
Pre-60S particles
Helicases
122903076 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SGT1
Motif
Other DBs
NCBI-GeneID:
122903076
NCBI-ProteinID:
XP_044099438
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Position
3:197905860..197920886
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AA seq
600 aa
AA seq
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MEHVTEGSWESLPMRLHPRVLGALRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGALVITPTRELAIQIDEVLAHFTKHFPQFSQILWIGG
RNPGEDVARFKEQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENYYMVCKADEKFSQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKGVQIMCIH
GKMKHKRDKIFMGFRRLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVSFLEINQKCPLQEMKLQKNTGDLLPKLKSMALADRAMFEK
GMKAFVSYVQAYAKHECNLIFRIKDLDFASLARGFALLRMPKMPELRGRQFPDFVPADVN
TDTIPFKDKVREKQRQKLLEQQRKEKRENEGRKKFIKNKAWSKQKAKKEKKKKMNEKRKR
EEGSDIEDEDMEELLNDTRLLKKFKKGKITEEEFEKGLFSSGKRTVLRADTGMPDSEEDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtcgctgcccatgcggctgcacccgcgggtg
ctgggcgcgctgcgggagctgggcttcccgtacatgacgccggtgcagtctgcaaccatc
cctctgttcatgaaaaacaaagatgtcgctgcagaggcggtcacaggtagtggcaaaacg
ctcgcttttgtcatccccatcctggaaattcttctgagaagggaagagaagctaaaaaag
aatcaggtcggggcgctcgtcatcacacccacgcgggagctggctattcagatagatgaa
gtcctggcgcatttcacgaagcacttcccgcagttcagccagattctctggatcggaggc
aggaatcctggagaagatgttgcaaggtttaaggaacaaggtgggaacatcattgtggcc
actccaggccgcctggaggacatgttccggaggaaggcagaaggcttggatctggccagc
tgtgtgaggtcccttgacgtcctggtgttggatgaagcggacagacttctggacatgggg
tttgaggcaagcataaacaccatcctggagtttttgccaaagcagaggagaacaggcctt
ttctctgccactcagacccaggaagtggagagcctggtgcgagcagggctacggaacccc
gtccggatttcggtgaaggagaagggcgtcgcggccagcagcactcagaaaactccttcc
cgtctggagaactactacatggtatgtaaggcagatgagaaatttagccagttggtacat
tttcttcgaaatcataagcaggaaaaacacctggtcttcttcagcacctgtgcctgtgtg
gaatactacggaaaggctctggaggccctggtgaagggtgtgcagatcatgtgcattcac
gggaagatgaaacacaagcgcgataagatcttcatggggttccgcagattgcagagtggg
attttagtgtgcacggatgtcatggcccgaggaatagacattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcagcgcaagtgcctttgttcatcgctgtggccgtacagcc
cgcatcggccacggtggcagcgcgctcgtgttcctccttcctatggaagagtcctacgtc
agtttccttgaaattaaccaaaaatgccccctgcaggagatgaaactccagaaaaacaca
ggagacctccttccaaagctcaagtccatggccttggccgacagagcgatgtttgaaaag
ggcatgaaagcctttgtgtcctatgtccaggcttatgcgaagcacgaatgtaacctcatc
ttcagaataaaggatcttgattttgctagtcttgctcgaggatttgccctgctgaggatg
cccaagatgccagaactcagaggaaggcagtttccagatttcgtgcctgcggatgttaac
acagacaccattccatttaaagataaagttagagagaagcagaggcagaaactactggag
caacaaaggaaagagaaaagagaaaatgaagggagaaaaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggagaagaagaaaaaaatgaatgaaaaaaggaagagg
gaagagggttccgatattgaagacgaggacatggaggaacttctcaacgacacgaggctc
ttgaaaaagtttaagaaaggcaaaattactgaagaagaatttgagaaggggttgttttcg
agcggcaagagaacagtcctgagagcagatacggggatgcctgattcggaagaggactgc
tga
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