Neogale vison (American mink): 122904777
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Entry
122904777 CDS
T08764
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs02010
ABC transporters
nvs04976
Bile secretion
nvs05206
MicroRNAs in cancer
nvs05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122904777 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
122904777 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122904777 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
122904777 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nvs02000
]
122904777 (ABCB1)
04147 Exosome [BR:
nvs04147
]
122904777 (ABCB1)
04090 CD molecules [BR:
nvs04090
]
122904777 (ABCB1)
Enzymes [BR:
nvs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122904777 (ABCB1)
Transporters [BR:
nvs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122904777 (ABCB1)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122904777 (ABCB1)
CD molecules [BR:
nvs04090
]
Proteins
122904777 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_16
Rad17
RsgA_GTPase
AAA_5
G-alpha
AAA_29
AAA_7
AAA_30
PRK
APS_kinase
NTPase_1
AAA_15
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
122904777
NCBI-ProteinID:
XP_044101879
LinkDB
All DBs
Position
4:complement(155391148..155497321)
Genome browser
AA seq
1280 aa
AA seq
DB search
MDPEGDRNGRAEKNFLKMGKKSKKDEKKEKKPTVSTFAMFRYSNWLDKLYMLVGTMAAII
HGAALPLMMLVFGDMTDSFANAGIPGNVTFINTTNGSNPNEPPFVNILEEEMTTYAYYYS
GIGAGVLVAAYIQVSFWCLAAGRQILRIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDDV
SKINEGIGDKIGMFFQSIATFFIGFIVGFTRGWKLTLVILAISPVLGLSAAIWAKILSSF
TDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISI
GAAFLLIYASYALAFWYGTSLVLSHEYSIGQVLTVFFSVLIGAFSIGQASPSIEAFANAR
GAAYEIFKIIDNKPSIDSYSKNGHKPDNIKGNLEFKNVHFSYPSRKEVKILKGLNLTVES
GQTVALVGNSGCGKSTTVQLMQRLYDPTDGTVCIDGQDIRAINVRYLREIIGVVSQEPVL
FATTIAENIRYGRENVTMEEIEKAVKEANAYDFIMKLPNKFDTLVGERGAQLSGGQKQRI
AIARALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIA
GFDDGVIVEKGNHDELMKEKGIYFKLVTMQTRGNEIELENAISESKSEIDAFEMPPKDSG
SSLIRRRSTLKSIHASQGQDRKLGTEEDLNENVPPVSFWRILKLNITEWPYFVVGIFCAI
INGGLQPAFSVIFSRIIGVFTRDEDPETKRQNSNMFSLLFLVLGIISFITFFLQGFTFGK
AGEILTKRLRYLVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQN
IANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGAGKIATE
AIENFRTVVSLTQEQKFEYMYAQSLQVPYRNSLRKAHIFGISFSITQAMMYFSYAGCFRF
GAYLVANGFMNFPDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSAAHVIMIIEKTPLID
SYSTGGLQPNTLEGNVTFNEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTV
VQLLERFYDPLAGTVLIDGEEIKSLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRV
VSQEEIVQAAKEANIHPFIETLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLL
DEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGKVKEHGTHQQ
LLAQKGIYFSMVSVQAGAKR
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggatccggaaggtgaccgtaatggaagagcagagaagaacttcttgaaaatgggcaaa
aaaagtaaaaaagatgagaagaaagaaaagaaaccaactgtcagtacatttgcaatgttt
cgctactcaaattggcttgataagttgtatatgctggtggggacaatggctgccatcatc
catggagctgcactccccctcatgatgctggtgtttggagacatgacagatagctttgca
aatgcaggaattccaggaaacgtaactttcataaatacaactaatggaagtaatccaaat
gagccacctttcgtcaacattctggaggaggaaatgaccacgtatgcctattattacagt
gggatcggggctggagtgctggtggctgcttacatccaggtgtccttctggtgcctggct
gctggaagacagatactcaggattaggaaacagttttttcacgctatcatgcgacaggag
attggctggtttgatgtgcatgacgtgggggagcttaacacccggctcacggatgatgtc
tccaaaatcaacgaaggaattggtgacaaaattggaatgttctttcagtcaatagcaacg
tttttcatcggttttatagtgggatttacacgtggttggaagctaacccttgtgatcttg
gccatcagtcctgttcttggactgtcagctgctatctgggcaaagatactgtcttcgttt
actgataaagaactcttggcatatgcaaaagctggagcagtagctgaagaggtattagca
gccatcagaactgtgattgcttttggaggacaaaagaaagaacttgaaaggtacaacaaa
aacttagaagaagctaaaagaattgggatcaagaaagctatcacggccaacatttctatt
ggtgctgctttcctgttgatctatgcatcatatgctctggcattctggtatgggacctcc
ttggtcctctcccatgaatattctattggacaagtactcactgtcttcttttctgtgtta
atcggggcttttagtattggacaggcatctccaagcattgaagcatttgcaaacgcaaga
ggagccgcttatgaaatctttaagataattgacaataagccaagcattgacagctattcg
aagaatggacataaaccagataatattaagggaaatttggaattcaaaaatgttcacttc
agttacccatctcgaaaggaagttaagatcttgaagggccttaacctgacggtggagagc
gggcagacagtggcgctggtcgggaacagcggctgcgggaaaagcacaacggtgcagcta
atgcaaaggctctacgaccccacagacggcacggtctgtattgatggacaggacattagg
gccatcaatgtaaggtaccttcgggaaattattggtgtggtgagtcaggaacctgtgctg
tttgccaccacaatagctgaaaacattcgctatggccgcgagaatgtcaccatggaagag
attgagaaagctgttaaggaagccaacgcctatgactttatcatgaaactacccaataaa
tttgacactctggttggagagagaggggcccagctgagtggtggacagaagcagaggatc
gctatcgctcgggccctggttcgaaaccccaagatcctcctgctggacgaggccacatca
gccctggacactgaaagcgaagcagtggttcaggtggccctggataaggccagaaaaggc
cggaccaccattgtgatagctcatcgtttgtctacagttcgtaatgctgatgtcatcgct
ggctttgatgatggagtcattgtggagaaaggaaatcatgatgaactcatgaaagagaaa
ggcatttacttcaaactcgtcacaatgcagacaagaggaaatgaaattgaattagaaaac
gcaattagtgaatccaaaagtgaaattgatgcctttgaaatgcctccaaaagactcagga
tccagtttaataaggagaagatcaactctcaagagtatacatgcctcacaaggccaggac
agaaagctggggacagaagaggacttgaatgaaaatgtacctccagtttccttctggagg
attctgaagctgaatataactgaatggccttattttgtggttggtatattttgtgctatc
ataaatggaggcctgcaaccagccttttcagtaatattttcaaggattataggggttttt
accagagatgaggatcctgaaacaaaaagacagaatagtaatatgttttctttgttgttt
ctagtccttggaattatttcttttattacattctttcttcaggggttcacgttcggcaaa
gccggggagatcctcaccaagcggctccggtacctggttttcagatcgatgctgagacag
gatgtgagctggtttgatgaccctaaaaacaccactggagcattgacaactaggcttgcc
aatgacgctgctcaagttaaaggggctataggttccaggctcgctgtaattacccagaat
atagcaaatcttgggacaggcattattatatccttaatctatggctggcagttaacactt
ttactcttggcgatcgtacccattattgcaatagcgggagttgttgaaatgaaaatgttg
tctggacaagcactgaaagataagaaagaacttgaaggtgctgggaagattgctactgaa
gcaatcgaaaacttccgaactgttgtttctttgacccaggaacagaagtttgaatacatg
tatgcacagagtttgcaagtcccgtacagaaactctttgaggaaagcacacatcttcggg
atctcattttccatcacccaggcaatgatgtatttttcctacgctggctgtttccggttt
ggtgcctacctggtggccaacgggttcatgaactttccggatgttctgttggtcttctca
gctattgtctttggtgccatggcagtggggcaggtcagttcgtttgctcctgactatgcc
aaagccaaagtatcagcagcccacgtcatcatgatcattgaaaaaacccctctgattgac
agctacagcacaggaggcctccagccgaatacgttggaaggaaacgtgacatttaatgaa
gtcgtgttcaactatcccactcgaccagacatccccgtgctgcaggggctgagcctcgag
gtgaagaagggccagacgctggcgctggtgggcagcagcggctgtgggaagagcacggtg
gtccagctccttgagcggttctatgaccccttggctggtacagtgctgattgacggcgag
gagataaagagcctgaatgtccagtggctccgagcccacctgggcattgtgtcccaggag
cccatcctgttcgactgcagcattgcggagaacatcgcctacggagacaacagccgggtc
gtgtcacaggaagagatcgtgcaggcagccaaggaggccaacatacaccccttcatcgaa
acactccctgataaatacaacaccagagtaggagacaaaggaacccagctctctgggggc
cagaagcagcgcattgccatagctcgcgcccttgttcggcagcctcacattttgcttctg
gacgaagctacgtcagctctggatacagaaagtgaaaaggttgtccaagaagccctggac
aaagccagagaaggccgcacctgcatcgtgatcgcgcaccgcctgtccaccatccagaac
gcagacttaatagtggtgtttcagaacggcaaggtcaaggagcatggcacgcatcaacag
ctgctggctcagaaaggcatctacttttccatggtcagtgtccaggctggagcaaagcgc
tag
DBGET
integrated database retrieval system
