Neogale vison (American mink): 122912748
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Entry
122912748 CDS
T08764
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122912748 (SOX6)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122912748 (SOX6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122912748
NCBI-ProteinID:
XP_044114824
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Position
7:complement(163579236..163947278)
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AA seq
855 aa
AA seq
DB search
MPSSSEVLADVVRESRIEEWKSSHFIRMSSKQATSPFACAADGEETMTQDLTSREKEEGG
DQHVASHLPLHPIMHNKPHSEELPTLVNTIQQDADWDSVLSSQQRMESENNKLCSLYSFR
NTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCM
EKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQK
KLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFP
HDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFISSTMAAAATSGLSPLQLQKGHVSHP
QINPRLKGLSDRFGRSLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGTKMPSAPQPPN
TAGAVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQSLFPATKT
SPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQRE
QQQQQPHGVDGKLSSMNNMGLNNCRNEKERTRFENLGPQLTGKSSEDGKLGPGVIDLTRP
EDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARSRASSEPHIKRPMNAFMVWAK
DERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPR
PKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTT
PSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKS
DYSSENEAPEAVSAN
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgagttctgaagttctggctgatgtggtaagagaaagccgaattgaagagtgg
aagagcagccacttcataagaatgtcttccaagcaagccacctctccatttgcctgtgca
gctgatggagaggaaacgatgacccaagatttgacctcaagggaaaaggaagagggcggt
gatcaacatgtggcctcccatctgcctctgcacccgataatgcacaacaaacctcactct
gaggagctcccaacacttgtcaataccattcaacaggatgctgactgggacagcgttctg
tcgtctcagcaaagaatggagtcagagaataataagttatgttccctgtattccttccga
aatacctctacctcaccacataagcctgacgaagggagtcgggaccgcgagataatgacc
agtgttacttttggaaccccagaacgccgcaaagggagccttgccgatgtggtggacaca
ctgaaacagaagaagcttgaggaaatgactcggacagaacaagaggattcctcctgcatg
gaaaaactactttcaaaagattggaaggaaaaaatggaaagactaaataccagtgaactt
cttggagaaattaaaggtacacctgagagcctggcagaaaaagaacggcagctctctact
atgattacccagctgatcagtttacgggagcagctcctggcagcgcatgatgaacagaag
aaactggcagcctcacaaattgagaaacaacggcagcaaatggaccttgctcgccaacag
caagaacagattgcaagacaacagcagcaacttctgcagcagcagcacaaaattaatctc
ctgcagcaacagatccaggttcagggtcacatgcctccgctcatgatcccaatttttcca
catgaccagcggaccctggcagcagccgctgccgcccagcagggtttcctcttcccccct
ggaataacatacaaaccaggtgataactaccctgtacagttcatttcatcaacaatggca
gctgctgctacttctggactcagccctttacagctccagaagggtcatgtctcccaccca
caaattaacccaaggctaaagggcctaagtgaccgttttggcaggagtttggacaccttt
gaacatggtggtggccactcttacaaccacaaacagattgagcagctctatgcagctcag
ctggccagcatgcaggtgtcacctggaacaaagatgccatcggctccacagccaccaaac
acagcaggggcagtctcacctaccgggataaaaaatgaaaagagagggaccagccctgta
actcaagttaaggatgaagcagcagcacagccgctaaatctctcttcccgacccaagaca
gcggagcctgtgaagtccccaacatctcccacccagagcctcttcccagccaccaaaacc
agccccgttaatctgcctaacaaaagtagcatccccagccccatcggaggaagcttggga
agaggatcctctttagatatcctgtccagtctcaactcccctgccctgtttggagatcag
gacacagtgatgaaagccattcaggaggctcggaagatgcgagagcagatccagcgggag
caacagcagcaacagccacatggtgttgatgggaaactgtcctccatgaataatatgggg
ctgaacaactgcaggaatgaaaaggaaagaacacgctttgagaatctggggccccagtta
acaggaaagtcaagtgaagatgggaagctgggcccaggtgtcatcgatcttacgcggcca
gaagatgcagagggaagcaaagcaatgaatggctctgcagctaaactacagcagtattat
tgttggccaacaggaggtgccactgtggctgaagcacgagtctacagggatgcccgcagc
agggccagcagcgagccacacatcaagcgaccaatgaatgctttcatggtttgggcgaag
gatgagaggaggaaaatccttcaggccttccccgacatgcataactccaacattagcaaa
atcttagggtctcgctggaaatccatgtccaaccaagagaagcaaccttattatgaagag
caggcccggctaagcaagatccacttagagaagtacccgaactataaatacaaacctcga
ccgaaacgcacctgcattgttgatggcaaaaagctccgaatcggggagtacaagcagctg
atgaggtctcggaggcaggagatgaggcagttctttaccgtggggcagcagcctcagatt
ccaatcaccacaggaacaggcgttgtgtatcctggtgctatcactatggcaacaaccaca
ccgtcacctcagatgacatctgactgctctagcacctcggccagcccagagcccagcctc
cctgtcatccagagcacttatggtatgaagacagacggcgggagcctcgctggaaatgaa
atgattaatggagaagatgaaatggaaatgtatgacgactatgaagatgatcccaaatca
gactatagcagtgaaaatgaagcccctgaagctgtcagtgccaactga
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