Nematolebias whitei (Rio pearlfish): 119407440
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Entry
119407440 CDS
T08042
Symbol
trappc8
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119407440 (trappc8)
Membrane trafficking [BR:
nwh04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
119407440 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
119407440
NCBI-ProteinID:
XP_037530192
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All DBs
Position
3:complement(24696016..24741370)
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AA seq
1362 aa
AA seq
DB search
MAQCVQSVQEFTQDSFVPMVAVLSSPEAETVSRKNNLNFAELLRPFCRLTSEGHIRDPNN
QLQTVKNLRICVNNLVTSPVPTSGSLSPAQYRMLSEVVLSFQPQEGAQATVVKTGDYSLN
LSVTTPWFEAYRDNFLQSMPALDHEFLNHYLACLLVVSSTEAVPLEQFLKLSQEQHRVQH
SGDYTHPKWFIPNTLKYYVLLHDMSEGDEQRAETVYEDMKQRYGPHGCYLLKINSRTISA
EQDEQIPDPWSQYLLRSNQRNQVRTXELLINNVCEAEVNSTEKDGPVESSSLETHPLQLD
TDTSSASLHSLGDVTTEVRKGPRDSDTTTPGNYGACLTLNDHDHIRQFVQEFTFRGLLPH
IEKNIRQLNDQLISRKGLSRSLFTATKKWFGGGKVPEKGGSEPKSTFGLLYPAEAPELQI
RKMADLCFLIQHYELAYNCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQGGAPRPYPAH
YMDTAIQTYKDRRHALRCYCQAMQVYKERGWSLAEDHINFTIGRHSFTLSQPENAVTAFR
QILVNDSRQTATQQSAFLREFLYVYKNVTGENEGCLPELPLPFIHSSATRVFFGHERRLA
EGEKQAATHVSLDQEFDQSSSAMWCHLEEQLVSSANRGIIPQNFQPTQSCLNSQTDNLRH
PLAVVDEPIIVELTFRNPLKVSLTLSNLSLLWKFTADGTVLTQKTCEQITGETISNEEAS
ALQTAQKDGIVTTEIIKDFEIGSEETKTARLRLLPHRTGQLNIAGVVYDLTSSFVGETTS
NAEGQQTPILMTVRGRQDLKIQGPRLNLTKEDKMQVRHGTDRRLDPIITPLMPLMEVFFL
QFPTALLCGEIRKAFVEFCNVSAVPLRGLRVVSTHPDFFTFGSQSSTPSTPVSAENCSAY
KTFATNIQLGSEASESFVSAEEFGQPSGVMEIPVQGGMLQPGESIRLPLWLRGPDQEGVH
EINFLFYYESSEKLLKISHRVLRHTVFICTSRSLSIQASACRSTAPPPHSVDDKGSRGTL
VFIDVENVNTSEGGVREFHIVQVSSSSQHWRLHKYINPSKDNDCKLSSRERTKLCFRATR
CKPHQANLDTAEKYTFADVNLGNERIISSYTPCGDFFFRCCSTSAFQPVDLKSRAPNNSK
SQNSGPTDTSAGSNLTWIAKKCNELDLNLIIIWKAYVIEDNRQLILEGQLHVALQTFGKE
TSSLVPKEEAQEMVLLKFKSELPPPIILPLPELSQLIKTNLHYPETFTHHFVQDSLCLVP
VTLTLSNCSLALIDVIIDLRHKSSSLESLEVHSSFAWVGQSQYKLQLGQQEVVSLTLKAC
FFRAGVYNLNTPRIFAKPAEQSSMCETSQQTASPALIIINST
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatgtgttcagtccgtacaggagttcactcaggactcttttgtcccgatggta
gccgtcttaagcagccctgaagcagagacggtatctcgcaagaacaatctgaattttgct
gagctgctgaggcctttctgcagactgacatctgaagggcacatccgggatcccaacaac
cagctgcagacggtgaaaaacttgcgtatttgtgtaaacaacctggtcacaagcccagtt
ccaacatctggctctctgagcccagctcagtaccggatgctcagtgaggtggtcctgtcc
tttcagccacaggagggtgctcaggccaccgttgttaaaacaggagactattccctaaac
ctgagtgtaaccacgccctggtttgaagcctacagggataactttctgcagtcgatgccg
gccttagaccacgagttcctgaatcactaccttgcctgtctgctggtggtttcctccact
gaggcggtccctctggagcagttcctgaagctgtcccaggagcagcaccgggtccagcac
agtggagactacacccatcccaagtggttcatcccaaacacactcaagtactatgtccta
ctgcatgacatgagcgagggggacgaacaaagggctgagacggtttatgaagacatgaaa
cagaggtacggtcctcatggctgttatctgttgaagataaactcccggaccatttccgca
gaacaggatgaacagattcccgacccctggagtcagtacctgctcaggagcaaccagagg
aaccaggtgaggacttgagaactgctgatcaacaatgtttgtgaagctgaagtaaactca
acagagaaagatggacctgtagagtccagtagtctggagacccatcctcttcagctggac
acagacacaagctcagcaagcctccactctctgggtgatgtcaccacggaggtgaggaaa
ggtccgagggactcggataccacgactccaggaaactatggagcctgtctgacgctgaac
gaccacgaccacatcagacagtttgtccaagaattcaccttcagaggcctgctgccacac
atcgagaaaaacatcagacaactcaacgaccagcttatttccaggaagggactgagtcga
tccctgttcacagctacgaagaaatggtttggcggaggtaaagttccagagaagggcggc
agtgaaccaaagagtacatttggccttctatatcctgctgaagccccagagctgcagatc
aggaagatggcagacctgtgtttcctgattcagcactatgagctggcctacaactgctac
cacactgccaagaaggacttcctctccgaccaggccatgctgtacgcagcgggagcgctg
gaaatggctgcagtttcagcctttctgcaaggtggagcccccagaccgtatccagctcat
tacatggacactgcaatacagacgtacaaagatagaaggcacgctctgcggtgttactgc
caagccatgcaggtgtacaaggagagaggctggtctttggctgaagatcatatcaacttc
acaatcggtcgccactctttcaccctcagccagccggagaatgcagtaacagctttcaga
cagatcttggtcaatgacagcagacagacagctacacagcagtctgccttcctcagagag
ttcctctatgtttataagaatgtgactggagaaaatgaaggatgcctacctgagctaccc
ctgcccttcattcatagctctgccacaagagtcttctttggacatgaacgacgccttgca
gaaggagaaaagcaggcagccactcatgtgtcgttggatcaggagttcgatcagagctca
tcagccatgtggtgccatctggaggagcagcttgtgtcttcggccaatcgtgggatcatt
ccacagaacttccaaccaactcagagctgtttgaacagtcagacggacaaccttcgtcac
ccgctggctgtggtggatgaaccaatcatagttgagctgacattcaggaatcctctaaag
gtttctttgaccttgtccaatctctcacttctctggaagtttactgctgatgggaccgtt
ttaacacaaaagacatgtgagcagatcacaggagagacgatcagtaatgaggaggcctca
gctctgcagactgcacagaaagatggcattgtcacgactgaaatcatcaaagattttgag
atcggatcggaagaaaccaaaacggccagactgaggctcctgccacacagaacaggtcag
ctgaacattgctggcgtagtttacgacctgacttcatcttttgttggggaaacaacttca
aatgctgaaggtcaacaaacaccgattctgatgacggttcgtggcagacaggacctgaag
atccagggcccacgactaaacctgaccaaagaagacaagatgcaggttcgacacggtacc
gatcgacgtctggatcccatcataacacccctgatgcccctgatggaggtcttcttcctg
cagtttcccactgctctgctgtgtggtgagatcagaaaagcctttgtggagttctgtaat
gtcagtgctgttcctttgcgtggtctccgtgtggtgtctacccaccctgacttcttcacc
ttcggcagtcagtcctcaacaccctccactccagtctcggctgaaaactgctcagcctat
aaaacatttgccacaaacattcagctgggttcagaagcctcagagagtttcgtttcagcc
gaagagtttggtcagccatcgggggtgatggaaatccctgtacaagggggtatgcttcaa
ccaggggagtctattcggctgcctctgtggctccgagggccagaccaggagggggtccat
gaaatcaactttctgttctactacgagagctcagagaaactactcaaaatcagtcatcga
gtgttgcgccacacggtgtttatctgcaccagtcgttctctgagcattcaggcttcagcc
tgccgcagcaccgctcctcctcctcactctgtagatgataaaggcagccggggaactttg
gtctttatcgatgtggagaacgtcaacacgagtgaaggtggcgtgcgggagttccacatt
gttcaggtgtccagcagcagtcaacattggcgtctccacaaatatattaatccctccaaa
gataatgattgcaaactgagcagcagagaaagaaccaaactttgttttcgggctacacga
tgcaaaccccatcaagccaacttggacaccgctgagaaatacacgtttgcagatgtgaat
cttggaaatgaacggatcatcagttcttacactccctgtggagatttcttcttccgttgt
tgttccacatcagcctttcagccagtagatttaaaatccagggcacccaacaacagcaaa
agtcagaactctggacccactgacacctctgctggttccaacctcacatggatcgccaag
aagtgtaatgagcttgacctcaacctaattatcatctggaaggcatatgtgatcgaagac
aacagacagctgatcttggagggtcagctccatgtagcgctgcagacgtttggtaaagag
accagttctctggttcctaaagaggaggcccaggagatggttctactcaagtttaagtcg
gagttacctcccccaatcatcctgcctttaccagaactttctcagctcattaaaactaac
ctgcactaccctgaaaccttcacacatcacttcgtccaggacagtctctgtctggtccca
gtaactctgaccctgtccaactgctccttggctctgatagacgtcatcatcgacctcaga
cacaaaagctccagtctggagtctctggaggtccacagttcgtttgcctgggtgggtcag
agccagtacaagctacagctgggccagcaggaggttgtgagcctcacgctgaaagcctgc
ttttttcgagcaggagtctacaacctgaacacaccacgcatcttcgccaagcctgcggag
cagagctccatgtgcgagacgagtcagcaaaccgccagtcctgctctcatcatcatcaac
agcacctga
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