Nematolebias whitei (Rio pearlfish): 119407607
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Entry
119407607 CDS
T08042
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119407607 (frem1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
FecCD
Motif
Other DBs
NCBI-GeneID:
119407607
NCBI-ProteinID:
XP_037530357
LinkDB
All DBs
Position
3:complement(2166150..2207114)
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AA seq
2058 aa
AA seq
DB search
MATFRLSLILLLETAVCSWCLVLVNPGVQVLRGGSVFITESDLNISADPNTDCKVEVVKN
EPMTQRVGRLTPQMFDCRFLSDEVQYVHNGSPLLDQDLVKLRVYRFTSSDTLVETMSIKV
QVLNLGSGMVELGSTPLVVPQFFGLSNTINSSVLIIRNQGDLVCTVRLMSGDTNVPMVGQ
LVREDNQQRKGRQASGFCPGNKPCLHDTTEVPFLKTSCQDFLSLGLKYQHLSPPSPQMDF
IPLRVELREETTRTLLQSEAVWLPVLIHGAMQNQPPRASFMASSILEVDQFILTPLSTAT
LDAVDQETPQDRLVFNVTSPPADGFITHMDDHTKPVQSFTWLDLNHMKVAYQPPNSSHSH
RRNYQVEFQVIDESFLSSSPIMVHLSIRSSDTNAPRVSWNMGLDLLEGQSRPLTWQQLQI
VDKDNIDAVYLVAVDGPLQGWLSVRGGKAFMFRVKDLQEGVVVYHHFDSDSTRDHIIFRI
SDGRHSIRHRFPINVLPKDDSPPFLINNVAVEVQEGGAVRLQEYMLLASDLDSSDDHILY
RTVSAPRAGQLVRKSSAHKTAVPVDSFLQRELIQGQIFYQHSGDEVFEDSFDFMLSDSHQ
PPNLSQPYTVVVHVFPVKDQLPVEVPGTTRSLVVKETEVVYLTQNQLHFTDRENPEADLT
FVITQPCFSPHRPGLMDAGRLFYTDSTSAMKKDHMVPVLKSFTQHAVTHMKVAFMPPVED
IGPDPLFVQFVFSVSDPTGGIVSGLVFNITVTPVDNQAPEAFTNVLRVEEGGAAFVTEEH
LLVQDRDSPEELLRVKVQSMVRHGRLELQGRVLLQGDQFLLPDLRGLRLRYVHDDSETTE
DKVGLEVLDGLNSADVVLHIQVFPVNDEPPQLGGGLRAQLSCEEGGRVQVTVDYLSATDR
DSDDSRLTYMLARSPGRGELQRSGLMADKFSQQDLLQGHVYYVHSGAEIGPDPVVDTITF
IISDSEAGGTDGCCHGDAPPVPLHGTLPVYDLNVTILPVNNKVPSVTLGESMLVVNEGAS
VCLCGAVLGASDPDSPTEDLTFQLETPPLHGFLENTLPTPGSEKSNAGVRVESFSLVHLT
SGFINYVQSECKGAEPTVDQLSISVSDGLHSSAPIHFYIIITPTNDETPTLWIANFSVTE
GGMTELTPSILDGSDLDVPSDLLTFTVEKPPAHGRLINGIHGAELSRYKKTGTEQLQRNL
HITSFTLQELKQGMKIMYVHDDTETLEDTVLLRLTDGVHTVEGTARVTVLPVNDNKPQLL
KNTGLDVKSGEHRVISSLVLEAEDLDTPPDQVYYVLKAAPRFGGLQLKTESGWIQLSAGQ
NFTQDDVDLNRLWYKHTAGVKGHDSLRFVLSDMDNESPAQIFFISVHTVHKGDIVLQSKA
VHLREGQRVVLNTDILLASDLAGRPEELVFTVSVPPQHGLVHAVQQPGVPLTSFTQLDVA
AHQVCYTHNNEHNAGSDSFSFFVTNGDTSLNGSLLFTVQHGDRVPPTLTRNAGLQLQDGS
TATITSAMLQLTDPDTATSDLSFVVTRLPRHGQLLLRGVQLSTSGSFFQTDVDQLSLVYR
HAPGSRAEVDAFHFLPSDGSNRGYLEFSQLRAEPAVFTIQVEHVDRAPPCLTGLQSPSTV
VDLGSGRFGLFISNKNLQASDPDSLTEHLEFSISRPPQFGYLENVGTGAFIRSRFTQQDL
DLRDVVFVIPPDLEETSDSFEFRLRDPAGNSSPPQRLELFWSRVQLSASCYRTCETSGTL
QIQVQRSGRSMDPAYVSIQVENGSATEGRDFTHSSAGLVQFDPGVTVKTWNIFLVDDGLE
ENHETFRVQLKTPQNSVLGQRTSATVEILDPRRGRCDPEEDHQPSPGPPRLPDPRQPEED
PVMDIEAELLWENQHHPPRGDVPNRWLSLDYRGVEPQDQPDPQDRETHVHRGGQLRPTPG
SSELKGGGGQETARSISNLCPDGWTFYRRRCYIISPSVASWASADRTCSQLFNSSLSSAH
SRRDVSWMWRFTGKNPFWIGLSGGLDSWMWADGSAVRLKGPAAGSDCVLVENPRRWVSTD
CSAETEHSFICSSPLQTL
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttcagactgtcactcattctccttctagaaacagctgtctgcagctggtgt
ctggttctggtgaacccaggtgtgcaggtccttagaggtggctcagtcttcatcacagag
tcggacctgaacatcagcgcagatccaaacactgactgtaaagtggaggtggtgaaaaac
gagccgatgacccagagagtcgggaggctaaccccacagatgtttgactgcaggttcctg
tcagacgaggtccaatatgttcacaatggcagtcctctgctagaccaggacttggttaag
ctgagagtctacaggttcacatcctcagacaccctggtggagacgatgagcatcaaggtc
caggtgctgaacttagggtccggtatggtggaactgggcagtacgccgctggtggttcct
cagttctttggtttgtcaaacaccattaacagctcagtgctgatcatcaggaatcaggga
gacctggtctgcactgtcaggctgatgagcggagacacaaacgtcccaatggtgggtcag
ctagtccgagaggacaaccagcagaggaagggacgacaggcatcggggttctgtcccggg
aacaaaccatgtctccacgataccacagaggtccccttcttgaaaacaagctgccaggac
ttcctgagcttgggtctgaaataccagcacctcagtcctccatccccacagatggacttc
atccccctcagagtggagctaagggaggaaaccaccaggaccctgctgcagtcagaggca
gtatggctgccagttctgatccacggtgccatgcagaaccagcctccccgggccagcttc
atggcctcttccatcctagaggtggaccagttcatcctgacccccctgagcactgctacc
ctggacgccgtggaccaagagacgccacaggaccggctggtgttcaatgtgacctcccca
cctgcagatggattcatcacccacatggatgaccacacaaagcctgtccagtccttcacc
tggctggacctgaaccacatgaaggtggcctaccagcccccaaacagcagccacagccac
cgcaggaactaccaggtggagttccaggtgatagacgaatcctttctgagcagctcgccc
atcatggtccacctctccatccggtcgtcagatactaatgcacctagagtctcctggaac
atgggtctggacctgctggagggtcagtctcgaccactcacatggcagcagctgcagatt
gttgacaaggacaacattgatgctgtttacttggtggctgtggacggacctctgcaggga
tggctcagtgtcagaggtgggaaggccttcatgtttcgtgtgaaggacctgcaggagggc
gtggttgtttatcaccactttgacagcgactccacccgtgaccacatcatcttccgcatc
agcgacggccgccacagcatccgtcacaggttccccatcaacgttctgccgaaggatgac
tccccgcctttcctcatcaacaatgtggccgtggaggtgcaggagggcggggctgtgcgg
ctccaggagtacatgctgctggcctccgacctggactccagcgatgaccacatcctgtat
cggacagtctccgctccccgggcagggcagctggtacggaagagctccgcccacaagaca
gctgtaccagtggacagcttcctgcagagagagctgatccagggtcagatcttctaccag
cactcaggagatgaggtgttcgaggactccttcgacttcatgctgtcagacagccaccag
ccgcccaacctgtcgcagccatacacagtggtggtccatgtattcccggtgaaggaccag
ctgcctgtggaggttcccggcaccacccggtctctggtggtgaaggagactgaggtggtt
tacctcacacagaaccagctgcacttcacagacagagagaacccagaagctgacctgacc
ttcgtcatcactcagccctgcttcagcccgcacagaccaggactgatggacgcaggacgt
ctgttctacaccgacagtaccagcgccatgaagaaggaccacatggttccagtgttaaaa
tccttcactcagcatgcagtgacacacatgaaggtggccttcatgcctcctgtagaggac
atcggacctgaccctctgtttgtccagtttgtcttctcggtgagcgaccccactggggga
attgtgtctggcctggtcttcaacatcaccgtgacccctgtggacaaccaggcccctgag
gctttcaccaacgtgctgcgggtggaggaaggtggagcggcctttgtgaccgaggagcac
ctcctggtccaggatcgggatagtcctgaagagttgctgagagtgaaggttcagagtatg
gtccgtcatggtcggttagagctgcagggacgagttctgctgcagggagaccagttcttg
ttgccagacctgagaggactacggctcagatatgtccacgatgactcggagaccacggag
gacaaggtgggtctggaggtgctggacggtttgaactctgctgacgttgtgctgcatatt
caggtctttccggtaaacgatgagcctccccagctgggtggaggtctgagggctcagctg
agctgtgaggagggggggcgggtccaggtgacggtggactacctgtcagctactgaccgg
gacagtgacgactccagactgacctacatgttggcacgaagccccggcagaggggagctg
cagagatccggactgatggcggacaagttctcccagcaggacctgctgcagggtcatgtc
tactacgtccactcaggtgcagagattgggccggaccccgtggtcgacaccatcaccttc
atcatctctgacagcgaggcaggaggaacggatggctgttgccatggagacgccccacct
gttcctctccacgggacacttcctgtttatgacttgaacgtcaccatcctgcctgtcaac
aacaaggttccctctgtcactctgggtgagtccatgttggtggtaaatgaaggagcctcc
gtctgtttgtgtggggcggttttaggagcttcagacccagacagccccactgaggacctg
acctttcagctggagactcctcccctacatggcttcctggagaacacactgccaacgcca
ggttctgagaagagcaacgctggagttcgggtcgaatccttcagcctcgtccacctgact
tcaggcttcatcaactacgtccaatcagagtgcaaaggggcggagccaactgtagatcag
ctgtccatcagtgtgagtgatgggctgcacagctccgcccccattcatttctacatcatc
atcacaccaaccaatgatgagactcctacactgtggatcgccaactttagcgtaactgaa
ggcgggatgacggaactgactccatccatactggacggctcagatctggatgtcccctcg
gacctcctcaccttcacagttgaaaagcccccggcccacggcagactcattaacggcatt
catggagccgaactgagccgatacaagaagacggggaccgagcaactccagaggaacctc
cacatcacctccttcaccttgcaggaactaaaacaaggcatgaagatcatgtatgtgcac
gatgacacggaaaccctggaggacaccgtgctgctgcggctgacagatggtgtccacacg
gtggaggggacggctcgggtcaccgtgctgccggtcaacgacaacaaaccacaactgctc
aagaacacggggctggacgtgaagtccggtgagcacagagtgatctccagcctggttctg
gaagctgaagacctggacacgcccccagatcaggtgtactacgtcctgaaggctgcacca
aggtttggagggctgcagctgaagacggagtcgggttggatccaactctcagccggtcag
aacttcactcaggatgatgtggacctcaaccggctctggtacaaacacactgccggggtc
aaaggtcacgacagcttacgctttgtcctcagcgatatggacaacgagtctccggctcag
atcttcttcatctctgtccacacggtgcacaaaggtgacattgtgctgcagagcaaggca
gtacacctgagggaggggcagcgggtcgtcctcaacactgacatcctgctggcatcagac
ctggcgggtcggccggaggagctggtcttcacagtgtcggtaccgcctcagcacggcctc
gtgcatgccgtccagcagccgggggtcccgctgactagcttcacccagctggacgtggcc
gctcaccaagtgtgctacactcacaacaacgagcacaacgcaggaagtgactccttcagc
ttcttcgtcacaaacggtgacacctccctgaacggctcgctcctcttcaccgtccaacat
ggcgaccgtgtcccaccaaccctgacccgtaacgccggcctccagctgcaggacggctcc
accgccaccatcacctccgccatgctgcagctcaccgaccccgacaccgcgacctccgac
ctgagcttcgtggtgacgcggctgccccgccacggccagctgctgctgaggggggtccag
ctgtcaacatctggcagcttcttccagaccgacgtggaccagctgagtctggtctacaga
cacgcgccgggcagccgggcggaagtcgacgccttccacttcctgccgagcgacggcagc
aacagaggatacctggagttcagccagctgagggcggagcctgcagtgttcaccatccag
gtggagcacgtggaccgggcccctccctgtctgacgggcctgcagagtcccagcaccgtg
gtggatcttggttctggacggtttggtctcttcatcagcaacaagaacctgcaggcctcg
gatccagacagtctaacagaacatttggagttctccatcagcagaccacctcagtttggg
tacctggagaacgttggcacaggggccttcatcagaagccgcttcacccagcaggatctg
gatctcagagacgtggtctttgttatcccgccagacctggaggagacatctgacagcttt
gagttccgtctcagagacccggcaggaaactcttctcctcctcagagactggagctgttc
tggtcccgggtccaactgtccgcgagctgctacagaacctgcgagacttcagggacgctg
cagatccaggtgcaacggagcggcaggagcatggacccggcctatgtctccatccaggtg
gagaacgggtcggccacagagggcagagacttcactcacagctcagccggtctggtccag
ttcgacccaggtgtgaccgtgaagacctggaacatcttcctggtcgatgacggtctggag
gagaaccacgagacattcagggtccagctgaaaacccctcagaactcggttctgggacag
agaacgtctgcgactgtggagatcctggaccccaggcgaggaaggtgtgatccagaggag
gaccaccagccttctcctggacctcctcgcctccctgacccccgtcagccagaggaggac
ccagtcatggacatcgaggcagaacttctgtgggagaaccagcaccaccctcccagagga
gacgtcccaaatcgctggttgtccctggactacagaggagtggagccccaggatcagccg
gaccctcaggacagagagacccacgtccacagggggggccagctgagaccgactcctgga
agttctgagctcaaaggaggaggaggacaggaaacggcccggtccatcagcaacttgtgt
cccgatggttggacgttctacagaagacgctgttacatcatcagtccatctgtggccagc
tgggccagcgccgacagaacctgctcccagctcttcaacagcagcctgagcagcgctcat
tccaggagagacgtcagctggatgtggaggttcactggaaagaacccattctggatcggt
ttgtctggaggtctggactcctggatgtgggctgatggttctgctgtcagactgaagggg
ccggctgctggttcagactgtgtcctggtcgaaaaccccagaagatgggtttctacagac
tgttcagctgaaactgagcactcgttcatctgttcttctcctcttcagaccctctga
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