Nematolebias whitei (Rio pearlfish): 119409067
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Entry
119409067 CDS
T08042
Symbol
ddx41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
119409067 (ddx41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119409067 (ddx41)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119409067 (ddx41)
Spliceosome [BR:
nwh03041
]
Complex C
Other components
Complex C specific factors
119409067 (ddx41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
AAA_22
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
119409067
NCBI-ProteinID:
XP_037531855
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All DBs
Position
4:26842810..26858339
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AA seq
613 aa
AA seq
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MEPESHTKKRSHGEDKSGSDRSENDDYVPYVPVKIRKQQMLQKMLRLRGKAVDEEQKDSG
EEQRDEDEGLGPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSV
KEMAKGIIYDDPIKTSWKAPRYILNMPDTRHERVRKKFHILVDGEGIPAPIKSFREMKFP
PAILKGLKKKGIVHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFALEQEKR
LPFFKREGPYGLIICPSRELARQTHSIIEYYCKLLEEEGAPQLRTALCIGGMSVKEQMEV
VKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQR
QTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQ
KTPPPVLLFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVAT
DVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDLK
ALLVEAKQKVPPVLQVLQTGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVTNI
GRKDYLAHSSMDF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgaaagtcatactaaaaagaggtcccatggagaagacaaatccggctcagat
agatcggagaatgatgattacgttccgtatgttccagttaaaatcagaaaacaacaaatg
ctacagaagatgctacgtctgcgaggaaaggcagtggacgaagagcagaaggacagtggg
gaggagcagagggatgaggacgagggtctcggtccacgctccaacgtaagtctgcttgac
cagcatcagcatctgaaggaaaaggcagaagcccgaaaggagtctgccaaagagaagcag
ctgaaagaggaagagaagattcttgaaagtgttgcagagggaagagctctgatgtctgta
aaagaaatggctaaaggtatcatatatgatgatccaattaaaacaagctggaaggcaccc
cgctacatcctgaacatgccagacaccagacacgaacgggtcaggaagaaattccacatt
ctggttgacggagaaggcatccctgctcccatcaaaagcttcagggagatgaagtttcca
ccagcaattctaaaaggtttaaaaaagaaggggattgtgcatccgacgccaattcagatt
caaggaatccccacggtgctgtcgggccgagacatgattggcatcgccttcactggatca
gggaagactttggttttcactctgccaatcatcatgtttgccctggagcaggagaagagg
ctgcctttcttcaagcgagaaggaccgtatgggctcatcatctgtccttcacgagagttg
gcgaggcagacgcacagcatcatcgagtattactgcaagctgctggaggaggaaggagct
cctcagctgcgcactgcgctctgtatcggaggaatgtctgtcaaggagcagatggaggtg
gtgaaacatggcgtccacatgatggttgccacccctggaagattgatggacctgctgcag
aagaagatggtcagtctggacatttgtcgctacttagctctggatgaagcggacagaatg
attgacatggggtttgaagaagacatcaggaccatcttttcctacttcaagggacaaagg
caaactctgcttttcagcgctacgatgcccaagaagatccagaactttgcaaagagcgct
ctggtcaaacctgtcaccattaacgtgggccgcgccggagctgccagcttggatgtcatc
caagaagtagaatatgtcaaagaggaggccaagatggtgtaccttctcgaatgtctccag
aaaacaccgcctccagtgttgctgtttgctgagaagaaggccgacgttgatgccattcat
gagtatctgctgctgaagggggtggaggccgtggccatacatggaggaaaagatcaggaa
gaaagaacaaaagctattgaagcattcaaagaaggaaagaaagacgtgttggttgccaca
gatgttgcttccaagggtctggattttccagctattcagcatgtagtgaactacgacatg
cccgaagagatagaaaattacgtccatagaattggaagaactggacgatcagggaagact
gggattgccacaacgttcatcaataaaggctgcgatgagtccgtcctgatggatctgaag
gctctgctggttgaagccaaacagaaggtccccccggtcctccaggtgctgcagaccgga
gacgagaccatgctggacatcggaggagagaggggctgcacgttctgcggaggtctcggc
catcgtatcacagactgccccaagctggaggccatgcagaccaaacaagtcaccaacatc
ggacggaaagactacctggctcacagctccatggacttttaa
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