Nematolebias whitei (Rio pearlfish): 119410167
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Entry
119410167 CDS
T08042
Symbol
sox4b
Name
(RefSeq) transcription factor SOX-4b
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119410167 (sox4b)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119410167 (sox4b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
119410167
NCBI-ProteinID:
XP_037533005
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Position
5:26607071..26608932
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AA seq
387 aa
AA seq
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MVQRMSHTESTAEALSFFAGDSSSDSGACMDLDPAASPLSPGSTASSTAGDKLGDNPAWC
KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLRDSDKIPFIREA
ERLRLKHMADYPDYKYRPRKKVKSSASKPGGGDRGEKVGSSSNSNTSTKSSSSSRKSGSK
SPSKTHKSLFGTSSSTVSSTKASAYASEAEPHHTSLYKSRSVSSGARHIPEGRKPKRVYV
FGGSGTPGSSVVVPASPTLSSSADSSDPLSLYEDAAGGRDSPASSPTPSGSHSSVSSCSS
SSSSSSSSEDEEFEDDLLDVNPSPGAVSGVPLGGFVPSVLDRDWDLNCESISGGSHFEFP
DYCTPEVSEMISGDWLESTISNLVFTY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcggatgagccacacggagagcaccgccgaggcgctgtccttcttcgccggg
gactcgagctccgactccggggcgtgcatggatctggacccggccgcctcgcctctctcg
ccgggctccacagcctcctccaccgccggggacaagctgggagacaacccggcgtggtgc
aagacccccagcggccacatcaagagacccatgaacgccttcatggtgtggtcccagatc
gagcggcggaagatcatggagcagagccccgacatgcacaacgcagagatctccaagcgg
ctggggaagcgctggaagctgctccgggacagcgacaagatccccttcatccgcgaggcc
gagcggctccggctcaagcacatggcggactacccggactacaagtaccggcccagaaag
aaggtcaagtccagcgcctccaagcccggcgggggggaccggggggagaaagttggcagc
agctcgaacagcaacaccagcaccaagagctcctcgtcctccaggaagagcggctccaag
tcacccagcaagacccacaagtccctgttcggaaccagcagcagcaccgtgagcagcacc
aaagcatccgcgtacgcctcggaggcagagccccatcacacctccctctacaagtccagg
tccgtgtcctccggagccaggcacatcccggagggcaggaagcccaaacgggtctacgtg
ttcgggggcagcgggaccccaggatcctccgtggtggtcccggccagccccacgctcagc
agctcggcggactccagcgaccccctcagcctgtacgaggacgcggccggcggcagagac
tcccccgcgtcctcccccaccccctccggctcgcactcctccgtctcctcctgctcctcc
tcctcctcctcctcctcatcttcagaggacgaggagttcgaggacgacctgctggacgtg
aacccgagccccggcgccgtcagcggcgtgcccctggggggcttcgtcccctcggtgctg
gaccgggactgggacttgaactgcgagtccatctccggggggtcccacttcgagttcccc
gactactgcacccccgaagtgagcgagatgatctccggggactggctggagtccaccatc
tctaacctggtgttcacatactga
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