Nematolebias whitei (Rio pearlfish): 119412512
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Entry
119412512 CDS
T08042
Name
(RefSeq) sodium-dependent neutral amino acid transporter SLC6A17-like
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119412512
Transporters [BR:
nwh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119412512
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
119412512
NCBI-ProteinID:
XP_037535456
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Position
7:complement(39982945..39998364)
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AA seq
739 aa
AA seq
DB search
MPKNSKVTQSEQSHEQVTESVADLLAHEEPLDYKSSSLNVGAAAGTKVPQIEVPENDGRP
AWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLVPYFILLLIIGIPLFFLELAVG
QKIRRGSIGVWNYVCPRLGGIGMSSLMVCGFVGLYYNVIIGWSIFYFFQSFQYPLPWSDC
PIRRNGTTAIVEPECDKSSATTYFWYRQTLNTTSTIAESGGLNIKMTLSLLVAWIIVCLA
VIKGIASSGKVMYFSSLFPYVVLFCFMVRGLMLKGSVDGIAHMFTPKLEKMLEPQVWREA
ATQVFFALGLGFGGVIAFSSYNKIDNNCHFDAVLVSFINFFTSILATLVVFAVLGFKANI
MNEKCVAENGEKILGYLNSNVLSHDLIPPHVNLSHLTTSDYAEVYSVIKTVKEDGFVQLG
LEPCVLEDELNKAVQGTGLAFIAFTEAMTHFPASPFWSVMFFFMLINLGLGSMIGTMTGI
TTPVLDAYKVQKELFTVCCCIVAFLCGLLFVQRSGNYFVTMFDDYSAGLPLTVVVILENL
SVAWIYGTKRFMQDLEDMLGFRPSVIYFYLWKYVSPFCLIILISATVIEMAISPPGYNAW
VQELAQERFQSYPPWALVMCFALIIVAMLPLPIIFIARHFNLIADGSNKLSVTYRKSIMK
DISNLEEQDEARFILGAKPGDAPSSGPVRRPYVTPRGNTSLDPNSLSPNVCYGTSYQNAA
ISPTTPTTPPTPVTPESDS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaacagcaaggtgacgcagagcgagcagagccacgagcaggtcacggagtcc
gtggctgacctgctcgcgcatgaggagcctctcgactacaagagcagctccctgaacgtg
ggggccgctgcggggacaaaagtcccacagattgaggtgcctgagaacgatggcaggcct
gcctggaacagcaagctgcagtacatcctggcccaggtgggcttctccgtgggtctgggg
aacgtgtggcgtttcccgtatctgtgccaaaagaacggaggaggtgcttatttagttcct
tacttcatcctcctcctcatcattggcatcccgctcttcttcttggagctggcggtgggt
cagaagatccgacgtgggagcatcggagtgtggaactacgtctgccctcgactgggcggg
atcggcatgtcgagtctgatggtgtgtggttttgtgggtctctactataacgtcatcatc
ggttggagcatcttctactttttccagtccttccagtatcctctgccatggagtgactgt
ccaatcagaaggaacgggacaactgcaatcgtggagccagagtgcgacaaaagctcggcc
accacctatttctggtaccggcagacgctgaacacgaccagcaccatcgcagagagcggc
ggcctcaatatcaaaatgaccctgtctctgctggtggcctggatcatcgtctgcctcgcc
gtcatcaaggggatcgcctcctctgggaaggtgatgtacttcagctctctttttccatat
gtggtgctcttctgtttcatggtcagaggtttgatgctgaagggatccgtggacgggatc
gctcacatgtttactcccaagttagagaagatgttggagccccaggtttggagggaagca
gccacgcaggtcttcttcgccctcggtttgggctttggaggggtcatcgccttctccagt
tacaacaagatagacaacaactgtcacttcgatgccgtgctcgtctctttcatcaatttc
ttcacctccatcttggctacactagtggtgtttgccgtgctgggcttcaaggctaacatc
atgaatgaaaaatgtgtcgcggaaaatggagaaaagatcctggggtacctaaactccaac
gtcctgagtcatgacctcattcctcctcacgtaaacctttcccatctcaccacatcagac
tacgctgaggtgtacagcgtcatcaagacggtaaaagaagacggctttgtccagctgggt
ctggagccttgtgtcctggaggatgaactcaacaaggctgtccagggcactggcctggcc
ttcatcgccttcacagaggccatgacccattttccagcatcccctttctggtcagtaatg
ttcttcttcatgctcattaaccttggtttgggcagcatgattggcactatgaccggcatc
accacacctgtccttgatgcctacaaagtccagaaggagcttttcacagtgtgttgctgc
attgtggctttcctttgtggcctgctgtttgttcaacgctcagggaattattttgtcacc
atgttcgatgattactctgctggtctgcccctcactgtggtggtcatcctggaaaatctg
tccgtcgcttggatttacggcaccaaaaggttcatgcaggacctggaggacatgttgggc
tttcgaccatcagttatttatttctacctctggaagtacgtctcccctttctgtctcatc
atcctcatctcagccactgtcatagagatggccatcagccctccaggatataatgcttgg
gttcaagagctggcccaggagcgcttccagagctaccctccctgggctctggtcatgtgc
ttcgctcttataattgtggccatgcttccacttcccatcatcttcatcgcccgccacttc
aacttgatcgcagacggctccaacaagctgtctgtcacctatcgtaaatctataatgaaa
gacatctccaacctcgaggagcaggacgaggccagattcatcctcggggccaagcccggc
gacgccccatcatccggtccagtacgcagaccctacgtgactccaagggggaacacgtct
ttggatcctaattctctgtctccaaatgtctgttacggcacaagctatcaaaacgccgcg
ataagccccaccacgccgacgacgccaccgacacccgtgacaccagagtctgactcttga
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