Nematolebias whitei (Rio pearlfish): 119415420
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Entry
119415420 CDS
T08042
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119415420 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119415420 (tdg.1)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
119415420 (tdg.1)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119415420 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
119415420
NCBI-ProteinID:
XP_037538484
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All DBs
Position
10:5682120..5693013
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AA seq
450 aa
AA seq
DB search
MDEKLNGSLPVVSPEYLHQWVRSAQQFQALQAQYASSDPNHQFHYPENHIEEAANEHMAN
PEPKMDLMEHANLTKPPAKKRGRPAQPKEPGAPKPPKVAKAPKTPKDPNAPKAKPGPKPK
KAAGAQADGKQEKIDESFKKVKRKVDRFKGMSEEEVMKKTLPDLLDYNLDYVIIGINPGL
MAAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTSLPVKYKMGFTNMVSRATPGSKDL
SSKELREGGKILVEKLKKYKPLIAVFNGKCIYEMFCRELFGKKPQKLDFGLQPHKIPDCD
VALYLMPSSSARCAQFPRAQDKVHFYIKLKELRDQLRGVRKSTEIEEVDYTFDLKLAKED
AKRLAIKEEQYDPGYEDAFGGAYMKKGPEDSQAEHQLNGHCTFSSAENKEGAQEATTSQT
EGQLPDGEWMNESFADQIPNISGGPKGGSM
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaagctgaatggatcactgcctgtcgtctccccggagtatcttcatcagtgg
gttcgctctgcccagcagtttcaagctctccaggctcaatacgcgagcagtgacccaaac
catcagtttcactacccagagaatcacattgaagaggcagcaaacgagcacatggcaaac
ccagaacccaaaatggatttgatggaacatgccaacctgactaaacccccagctaaaaag
cgtggcagaccagcacaacccaaggaaccaggtgcacccaaaccaccaaaagtggccaag
gcaccaaaaacgcccaaagacccaaatgcgccaaaagccaaaccaggtccgaaacccaaa
aaggctgcaggtgctcaggctgatggaaaacaggagaagattgatgagagcttcaagaag
gtgaaaaggaaagtggaccgcttcaaaggaatgtcggaggaggaagtcatgaaaaagact
ttaccagacctgctggattacaacctggattatgtcattattggtatcaatccaggactg
atggcagcttttatcggccgctggtttccaggtccaggaaatcatttctggaaatgcctg
tttctatctggattcacagaggagcagctcaaccacatgcacgacacgtcgctgcctgtc
aagtacaaaatgggcttcaccaacatggtatcgagagcaacaccagggagcaaagacctc
tcaagtaaggagttgcgtgaaggaggcaaaattcttgtggagaagttaaagaagtacaaa
ccgcttattgctgtgttcaatggaaaatgtatttatgagatgttctgcagagagctgttt
ggcaaaaaaccacaaaaacttgactttggtttgcagccgcacaagatccctgactgtgac
gtggccctgtatctgatgccttcatccagcgctcgctgtgcccagttccctcgcgctcag
gacaaagtgcacttctacatcaaactgaaggagctcagagatcagctgaggggcgttcga
aagagcaccgagatcgaggaggtggactacacgtttgacctcaagttagctaaagaggat
gccaagaggttagcaataaaggaggagcagtatgatccaggttatgaagatgcttttggt
ggagcatatatgaagaaaggacctgaagacagccaagctgaacatcagctcaatggtcat
tgtacattctcatctgctgaaaacaaagaaggagcgcaggaggcgacaacgtcacaaacg
gagggccagctccccgacggagagtggatgaacgagtcctttgcagatcagattccaaac
ataagcggcggaccaaaaggtggcagcatgtga
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