Nematolebias whitei (Rio pearlfish): 119417374
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Entry
119417374 CDS
T08042
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119417374
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119417374
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
119417374
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
119417374
NCBI-ProteinID:
XP_037540506
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Position
11:complement(47805016..47808022)
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AA seq
483 aa
AA seq
DB search
MKPKTFHRQSDYRHAWRSDHPLGYLPLSELDSGLGCGPDSPHHRLLLSEAETDAMSSLPG
HTPSSQGSSSSSESLISSEPSDSGFHSVSTGEHRRLHKIHGGHNSRQTPHLRSGHSPREQ
RGRWDLESIPETTPVIHSEAPQASHCSVGNSTTTTVHFHRAERSPTLPRHRSPPSPSVGC
RTEPCQRRALWLEQQMGGRRMMEAPGRSRTITDLSEGQRHRRASHPNMTDQDNLRNTLQN
CQSSPTRDAMGPRSRASYPSNSHPAGHLSIDRPNLTNHLSSTRSREEDSLSKSPGSASSG
ISDWRGVQTLGSHMETLKGPYVPLYSTLGAPQHSPRSPTSPRSRLSNQKSVRNQLLRARA
YRLARERSEVTTDEGEGAREGEEEGEDGRWAGRYWSRTERRRQMALSRQHRERRGGGEDL
MGGGQGLLSSQAVLELSHMKQNRLRNSKLLDDWTTVEELLTHGTRVESDSQLCPSPLLSV
TTV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaagactttccacagacagtcagactatcgtcatgcttggaggtctgaccat
cctctaggataccttcctctcagtgagcttgacagcgggttgggctgtggaccagacagc
ccacaccacaggttgctgctttccgaagccgagactgatgccatgtcatctctgccaggc
cacaccccttcctcccaaggctcctcctcttcctctgaatccctaatctcatccgaaccc
agtgactccggtttccacagcgtcagcactggggagcacagacggctgcacaagattcat
gggggccacaactcccgtcagactccccacctccgatcaggccactcccctcgagagcag
agaggacgttgggacttggagtccatccctgagacgacgccagtgatccactctgaagca
ccacaggcttcacactgctcagtgggtaacagcactaccacaacagtccacttccacaga
gctgagaggagtccaactttaccacgccatcgttccccaccatcaccatctgtcggttgt
cggactgagccttgccagcggagggcgctgtggttggagcagcagatgggtggaagaagg
atgatggaggctccggggaggagtcgaacgataacagatctgagtgaggggcaaaggcac
cgtagggcaagtcaccccaacatgacggaccaggacaatttgagaaatacactccagaac
tgccaatccagtccaaccagagatgcgatgggaccgaggagcagggccagttatcccagc
aacagtcaccccgctgggcacctcagcatagacagacccaacctgaccaatcatctgagc
tcaacccggagcagagaggaggactccctctctaagagtcctggatctgcctccagtggc
atctcggactggcgaggcgttcaaactctcgggagtcacatggagacacttaaaggtccc
tatgttcctttgtacagcactcttggagcccctcagcatagtcctcgatctccaacttca
ccccggtccagactgtccaatcagaagtctgtcaggaatcagctactcagagcccgagct
taccgattggccagggaacgcagtgaggtcacgacagatgaaggcgagggggcaagggaa
ggagaagaggaaggggaagatggacggtgggcgggacgatactggagtcggacagaaaga
aggcgtcagatggcgctatcacggcaacaccgagagagaagaggcggaggggaggacctg
atggggggaggtcaggggttgctgtcatctcaggcggtgttggagctgagccacatgaag
cagaaccgcctgaggaacagcaagctgctcgacgattggacgacagtggaggaactgttg
acacacgggacccgagtggagagcgacagtcagctctgtccgagccctctgttatcagtc
accactgtctga
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