Nematolebias whitei (Rio pearlfish): 119420200
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Entry
119420200 CDS
T08042
Symbol
ftr83
Name
(RefSeq) finTRIM family, member 83
KO
K12006
tripartite motif-containing protein 16
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119420200 (ftr83)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119420200 (ftr83)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
PMEI
Prok-RING_4
zf-RING_6
DUF5344
Kinesin_assoc
Exonuc_VII_L
DUF5446
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
119420200
NCBI-ProteinID:
XP_037543511
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Position
14:complement(41014898..41022715)
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AA seq
572 aa
AA seq
DB search
MSSDQDSCYLCKEYLRDPVSIPCGHVFCSICLKTYWDHADHTGSYQCPECRVTYNKRPTP
RRMGGSRYVTTQRSSEIFPPPPPSPDYNYAGPQDVGCDICVGKKHKAIKTCLMCLASYCE
KHLKPHYESATFKRHKLVDEIGHLDRQICPQHQKGLELFCRTDEMCICVLCTVKEHKGHD
MVTAEQERADEQQRLGATQAEIQERIHDRLKQMEELKHAVDALKNSAQRALQDCEKMFGD
MMRSIERMQQEMTKLISSNKRAALNNAEGHMERLTHEIADLKRRDNEITQLSRTEDHIHF
IQSYHMLIAQTEAEELPSVSVNPYFSFGPVTKSVSEMKQHMNEFSNDELVKVAKTVNKMS
FCQLNDPKRKKSIKSEEAVMYKSVPVQEPHYREDFLRYACQLTLDPNTAYRQLYLSRGNR
KAALKRDAQSYSDNAARFDSLPQVLCKEPLTGGCYYWEVEWSGEGAAIGVTYKSIKRTGY
GDNCRIGYNRKSWSLFCSDSSYSARHNKEQIDVKAPYSSRIGVFLDHDGGALSFYAIGET
MSLIHRFKASFSEPVYPGFWVWYESAVTILQL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagatcaggacagctgctacctgtgtaaggaatacctcagggacccggtgtcc
atcccatgtggtcacgtcttctgctccatctgcctgaagacatactgggaccatgctgac
cacaccggctcctaccagtgccctgagtgcagggtgacctacaacaagaggcccactccg
aggcgcatgggaggctcccgctatgtaaccacgcaacgcagctcagagatctttccaccg
ccacctccatcccctgactacaactatgcaggaccgcaggatgtgggttgtgacatatgc
gtcggcaagaagcacaaagccatcaagacctgcctgatgtgcctggcctcctactgcgag
aagcacctcaagccccactacgagtcggccacgtttaaaagacacaagctggtggacgaa
atcggccacctggacaggcagatctgcccgcagcatcagaaaggtctggagctgttctgc
cgcactgacgagatgtgcatctgtgtgctgtgcacggtgaaggagcacaagggtcatgac
atggtgacggcagagcaggagagagccgacgaacagcaacgactgggcgccacacaggct
gagatccaggagaggattcatgaccgcctgaagcagatggaggaactaaagcatgcagtg
gacgcactcaagaactcggcacagagagcgctgcaggattgcgagaagatgttcggtgac
atgatgcgctccattgagaggatgcagcaggagatgaccaagctgatatcgtccaacaag
agagcagcactcaacaacgcagagggccacatggagcgtctgacccatgagatcgctgac
ctgaagaggagagacaatgagatcacccagctgtcccgcaccgaggaccacatccacttc
atccagagctaccacatgctgatagcccagacagaagctgaggagctgccgtcagtttcc
gtcaatccctacttcagcttcggccccgtgactaagtctgtgtccgagatgaagcagcac
atgaacgaattcagcaatgatgagctggtgaaggtcgccaagaccgtgaacaagatgagc
ttctgtcagctgaatgaccctaaaaggaagaagtccatcaaaagtgaagaagctgtgatg
tacaagtctgtccccgtccaggagcctcattacagagaagacttcctgagatatgcttgt
cagctcactctggacccaaacacggcctacagacagctctacttgtctcgaggaaacaga
aaagccgccttaaagagggacgcccagtcttacagtgacaacgccgcccggtttgactcc
ctgccacaagtcctgtgtaaggagcctctcactggggggtgctactactgggaggtagaa
tggagtggggagggggcggccattggagtcacctacaaaagcatcaagaggacgggctac
ggcgacaactgccgcattggctacaaccgcaagtcctggagcctgttctgctccgactcc
agctactccgcccgccacaacaaggagcagatcgatgtcaaagcgccttactcctcccgc
atcggggtgttcctggaccacgacgggggcgctctctccttctacgccatcggagagacc
atgtctctcatccaccgcttcaaggcctcgtttagtgaacctgtgtatccgggcttctgg
gtttggtatgagtcagcggtcaccatcctgcagctgtga
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integrated database retrieval system
